LOCUS       XM_006501310            7504 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus UDP galactosyltransferase 8A (Ugt8a),
            transcript variant X1, mRNA.
ACCESSION   XM_006501310
VERSION     XM_006501310.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006501310.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7504
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..7504
                     /gene="Ugt8a"
                     /gene_synonym="Cgt; mCerGT; Ugt8"
                     /note="UDP galactosyltransferase 8A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 6 ESTs, 859 long SRA reads, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 17 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:22239"
                     /db_xref="MGI:MGI:109522"
     CDS             85..1710
                     /gene="Ugt8a"
                     /gene_synonym="Cgt; mCerGT; Ugt8"
                     /codon_start=1
                     /product="2-hydroxyacylsphingosine
                     1-beta-galactosyltransferase isoform X1"
                     /protein_id="XP_006501373.1"
                     /db_xref="GeneID:22239"
                     /db_xref="MGI:MGI:109522"
                     /translation="MKSYTPYFMLLWSAVGIARAAKIIIVPPIMFESHLYIFKTLASA
                     LHERGHHTVLLLSEGRDIAPSNHYSLQRYPGIFNSTTSDAFLQSKMRNIFSGRLTAVE
                     LVDILDHYTKNCDMMVGNQALIQGLKKEKFDLLLVDPNDMCGFVIAHLLGVKYAVFST
                     GLWYPAEVGAPAPLAYVPEFNSLLTDRMNFLERMKNTGVYLISRIGVSFLVLPKYERI
                     MQKYNLLPAKSMYDLVHGSSLWMLCTDVALEFPRPTLPNVVYVGGILTKPASPLPEDL
                     QRWVSGAQEHGFVLVSFGAGVKYLSEDIANKLAGALGRLPQKVIWRFSGTKPKNLGNN
                     TKLIEWLPQNDLLGHSNIRAFLSHGGLNSIFETMYHGVPVVGIPLFGDHYDTMTRVQA
                     KGMGILLEWNTVTEGELYDALVKVINNPSYRQRAQKLSEIHKDQPGHPVNRTTYWIDY
                     ILRHDGARHLRSAVHQISFCQYFLLDIAFVLLLGAVLLYFILSYVTKFIYRKIKSLWS
                     KNEHSTVNGHYQNGIRNGKYKGNGRVKHEKKVR"
ORIGIN      
        1 acctttcggt gaccgcagtc gtggacagaa gacagcactg tcgctcgtgg cccgggcaag
       61 gcggaccgga gtgcggggcc ggctatgaag tcttacactc catatttcat gctcctgtgg
      121 agtgctgttg gaatagcaag ggctgctaaa atcatcattg tgccgccaat tatgtttgaa
      181 agccatttgt acattttcaa gacactagca tcggccttgc acgagagagg ccatcacacc
      241 gtgctcctcc tctcagaagg cagagacatt gccccatcta atcactacag cctccagcgg
      301 tacccaggca tcttcaacag taccacctca gatgctttcc tgcagtctaa aatgaggaat
      361 attttttctg ggagattgac agcagttgaa ctggttgaca tactggatca ctatactaag
      421 aattgtgaca tgatggttgg caaccaagcc ctaatccagg gtttaaaaaa agaaaagttt
      481 gacctgctac tggttgaccc caatgatatg tgtggatttg tgatcgccca tcttttaggc
      541 gttaagtatg ctgtattttc tactggcctt tggtatcctg ctgaagtagg agcacctgct
      601 cctttagctt atgtcccaga gtttaactca ctcctcacag accgcatgaa cttcctggaa
      661 aggatgaaaa atactggtgt ttacctcata tccagaatag gggttagctt tctggttctc
      721 ccgaaatatg agaggataat gcagaagtac aacctgctgc ctgcaaagtc catgtatgat
      781 ttggttcatg ggtccagcct atggatgtta tgtactgacg tagcactgga gtttccaaga
      841 ccaacgctgc ctaatgttgt gtatgttgga ggaatcctga caaagccggc cagcccactg
      901 ccagaagatc tgcagaggtg ggtaagtggt gctcaggaac atggctttgt cctggtgtct
      961 tttggagctg gtgtcaagta tctgtcagaa gacattgcca acaaactggc aggagctctg
     1021 gggagattgc ctcaaaaagt gatttggaga ttttctggaa ccaaaccaaa gaacctagga
     1081 aacaacacta agctcataga atggctgcct caaaatgacc tgcttggcca ttcaaatatc
     1141 agagccttcc taagccatgg tggtttgaac agtatatttg aaactatgta tcatggtgtc
     1201 cctgtagtgg gaatcccact gtttggagac cattatgata ctatgactag agtacaggca
     1261 aaaggcatgg ggatcttgtt agaatggaat acagttactg aaggagagct gtatgatgcc
     1321 ctggtgaaag ttatcaataa tcccagttat cggcagaggg ctcagaagtt atcggaaatt
     1381 cacaaggatc aacccggcca ccctgtcaat cggactacct attggataga ctacattctt
     1441 cgccatgacg gagcccgtca cctccgttct gctgtccatc agatctcttt ctgccagtat
     1501 ttcctactgg atattgcctt tgtgcttctg cttggtgctg tcttgctcta cttcatattg
     1561 tcctatgtga caaaatttat ctatagaaaa atcaaaagtc tatggtctaa aaatgagcat
     1621 agcacagtta atggacatta ccaaaatgga atccgcaatg gcaaatacaa aggcaatggt
     1681 cgtgttaaac acgaaaagaa ggtgagatga tccgacagcc caggtgaagg ggccaagtct
     1741 gtagtgctat tctttagtct aacagctact aaaagtaaat gtcagcaaac agtcctaaca
     1801 tgccctcatc agatcttatt aatgagattc catggataaa atgtctgtaa agagcacaac
     1861 cctaaatgca aaaatgtatt ttattctaat actgatgcag agagttggca gtgaaccatt
     1921 tagaagcctt aattatttaa atcaattaag tgacgtgtca gaccttagtt ttaaatgtta
     1981 tgtatgtgtt acaggtgagg gatggtgttt ttctcttgat aagatgtgtg tatgtttcct
     2041 acgtcattga gttttagctt ctatttgtat ttagtttgta acagtatttc aaaaactgtt
     2101 tcctaaactc ggtgtaaagt ggcaagtgaa aagatgggtg gcacaatttt tgtatttttg
     2161 tttattatag acatttttat tttattttta ttttttgtaa atgctttttt cttaccaact
     2221 atagacactt gtgaaggaaa acatgcaatg aagtaaatga gtgaaaaggt tttcacattt
     2281 tgctaatatt tttctcctac caatgatttt tctctggaag aattttctaa ttaggacaga
     2341 gcaacaaagc tcttactttt gttcaaagta ctgaagatta ttgcttaaat agcacttgga
     2401 agcagagcca tgtgtaaatg cttatttgac ttagatattc cagaatttga gttttgagta
     2461 ttcaggtatc acttctaaag ttttaacttt agaataatca cctttcattc cttttattat
     2521 ctgggccaca atatagtata tagtatatag gtgccaacgt atccttcttc caaacagaac
     2581 atttgcagtt ctccttgctg cctgctttag ctgcaggagt ttgaggtttg tcagcaaata
     2641 agactttacc tgctacacag aaatgacaga aattgtacca cccatttgtg caaatgagtt
     2701 tccattccct cctcactaca tcagcccaac tcagtagcct tttttgtcat tgtgcttgac
     2761 atgggacaat gacagtatct gtttggaaca tggagacaag tcacaacttt cataaattca
     2821 ggacctccat gttgaaccac ttactaaatg gcactgtaag cttattctat gtcactctgt
     2881 ttactgagca tttgcactgc acatgctctg tgtgtgcatt atttatttgt ggttggaaat
     2941 cccatatttg acacttgaga gtagagaaat gaaatattta cttaatgtca ctcactaaca
     3001 tggcagagtt gtgaaaaatc tagaatgctg taaatccttg tcatacactg tgacatacaa
     3061 ctttgtgaca ctcccaccag gagccagtct catatactta gatttaatat caatagtttt
     3121 ttaatgcaca atgcatacag cgtactgctt tctgaatact tgaaatggta tctatacaaa
     3181 cctgttagtt acaccttttc acaatcttat cacaacattg ccattcaaag aggaaaatga
     3241 tcaggcaatg aatggtgggt ggtaacagag catagagtgt atgaatgagt tgattttact
     3301 tttggcattt ggtaaagttg acaatagaca ctaactggat gattaagcat aagttaattt
     3361 ccactgtggt ttaaaaaaaa aagaaactta aaacaataaa caaagttgaa aatagagaaa
     3421 tgttgttgga ataaaatttt tattcagatt ttatttcaca gtattatata aaggtatatt
     3481 tacattataa acatgtttct aaggcctccc aacttttgta tgtatatatg aatgtgaaaa
     3541 caatgtatta aatgtgagaa catatttaat aaaaattaaa tgcagggatt tatcctttaa
     3601 agtacatcaa cacggatctt taagttctat cccagaatta agaatgttaa gtacaactcc
     3661 tctcattgtt tgtttgtttt gttttgtttt gttttgtttt gtttagcatt ttgttgttct
     3721 tctctatcat cccctgccct ggactcccag gaagcttact agcctgttat agtaaatagg
     3781 atgatttaac attttctata cttgggctaa attctctaag gaagtaaggt tttcaagaag
     3841 gcatttattc atttactttt cagaaagagt ctctgcagca gcaagtgctt ccatggctac
     3901 tttatcacat gaaaactggg atgtttttcc ttctaaattg gtaatatgta atatctcatt
     3961 aatagcataa gacaagaatt ttgataagat ttggtaaatc tttggaaagc gcttgtattc
     4021 gttgcaagta gtactatatt attgaacttg aagaaaagta gatattttcc tcaaatctca
     4081 gacttttact aaagcctaaa ttaccactgt tcatactggg gccttgggtt gatccccaga
     4141 ctatctcatc ccccatgact caccaaagaa gaaacgaagg aagttgcaaa gtatcgtcaa
     4201 gtactaattt agtgatctgt tttatcgaaa gtatagccaa ttaatttctt tgctgtagta
     4261 attaaataag ttcatagatg tcacatttaa caatgtttat tactatcaat aataatatga
     4321 aggggaacac tcaaaatctt acaagttgta atggggaaat tataggaaat ctgttgttaa
     4381 aaatctcctc aatataagcc ttaaagcatt tcttgttctg cttgcaagac tagtttaccc
     4441 agcttttaaa gaagtatact tactatctat agatatgctc tttgtatttt tggcagactt
     4501 agatattttt tcctgacaca ttatagtaag aagttcttgg agttcacaca ggtaaaccat
     4561 ctacatggtt atctagctga aaactctcca aactagtagg tttccagcta ctgggggtgt
     4621 ttgtgggatg gacttacgga tgttagcagt aggaggtagc acaaatctgt aggtatggaa
     4681 acaaaaagtc acatgatagt gttatcatat cattggggtc attcagatgg attttaaaga
     4741 aagaattcac attatagtct gcaaattttt tgaaaatata ctctataaga caagagttct
     4801 taattagagt ataatccaag ttttgactga tgaatcacag ccacatgcaa aattatacta
     4861 tgagacctag aaaggggaaa acttttgata tgtaaataag gaaaatatct aattttttaa
     4921 aaatgtaagt taatggaaat aagtccaata ccaacattag ccttatggat ttacaatacg
     4981 tctgatagga cagagaaatt tcatgtatgg aaattgttta atttatgaac taatatggaa
     5041 ttttccactg acttgtagag agttaacggg attatactta cttagcttct accgtcactt
     5101 gtacttttcc atatcctact ttatataagt gataatttcc tattgcaatg agcagaactg
     5161 acataggctt cgttgaacca gtgttaatta cccagtttca aatgatagct tttgtggaac
     5221 cattccttgg ttttaatatt gggattatat tttcttttaa ggcaaaggca aaatttaaaa
     5281 ctccatgcaa tgaagaagag ttttgttctt ggcatccttt atgaaacttg taacacttta
     5341 gtttcaggaa ctactacagt gttacgtagc atagagttta gagttggtac agtagaatgt
     5401 ctaacctact gtaaacatgc tttctatatt atcttgaaaa ttatccttca gtttttctca
     5461 gaattttgtc tcaaagtaca cataattcta tgcttttata gaaaatgggg atactggggc
     5521 ttaaaaccat tggtaaattg caagtagaat tcaactcagc agtgctttgt gctgaggtag
     5581 ctctgaatgg cagtccccaa tggcatgttg gaaaccatca gttctacttc taatcttgat
     5641 tctgtcttct aatttgatca aaagattgaa cttacaaata ctggggcaat gagaacagtt
     5701 tgaatattta aaaaaaggct tatgagactc aagaagtaaa caaaacatgc aaggcttaga
     5761 cagctcatga aaattacaag gttcacaaga tgctcctcaa ggaatataag caacaacagt
     5821 tgatggggtc aagagattca ctcaccaagc tatacaggga atggagattt gtgactgtca
     5881 gccatactag gtgacctttg gatgatgctt tcctgttacc atgctgctgt tagtaacccc
     5941 cacaaagtca ctggttgact aaatcataca tcagtcccta cctgaggtga attgacattt
     6001 tattacatct ctccaggaaa agttacccaa tatatattca aaaagaatta aaatacttat
     6061 ataaatttat tgttggttcg tgctggggtc cagccctggt gcagttcaaa atccaaagaa
     6121 gggtgtgtgg agtcaggaaa cgaagacttg gaccaagaag tgcaattcac acatgctggc
     6181 actgagacaa ctcaggctgc ctttatttat acatctatct ttttcacaga tgaaaagatt
     6241 ttacatcagt tttcttattt tctcatgtat agtctctctt aagaatttct tatatttaac
     6301 aatattatag actatgtttt tcctttcttc tcctcaattc ctgtagtttt ctgctaaaac
     6361 atgagctaac tcaagaaaga ggaaacagtt aatagctaac ccagcacatt ggtgcataac
     6421 caattgacag ttttagcagt tattgcagtt acagtataga gaggtgataa actgcatatc
     6481 cagaaaatta aactgtaaac catatgtaga ttctaaatat ttgtagtgtt ttctgtaact
     6541 gaatttaaat gataatgaga cctagtccac ctgcagtttt gcagaaaatt aagagaagtg
     6601 aatcatttat ttggatgcct cagccaatgt catacatgta aggggatgga aatgtcagtt
     6661 tgtgcttgtt tagaggcagt tctgaggttt tcataggtgt tgggtgatct agctcagatc
     6721 ctgtactgtt ggtcgacagt gcccagtctt cccatcctgt ttgctctcat ttttctgctt
     6781 ctggattttc tgttttcttc cttagctctt gtgtaagtta aaagttttgt aactcactgg
     6841 caatcctaag tgtaggatgt acagattttg tgtgtgtatg tgtgtgtgtg tgtgtgtgca
     6901 catgcacaca catctagaaa cgatgttttg aagacaatat acttaagaca actagaagtt
     6961 aaaacattca aaagttcaga gcaaatgtcc atgtattaac aataatgtgc aagataaaca
     7021 tccaatctaa acattctaag gcccatcata tgagggaggg agtagtgctc atatggtcac
     7081 tgggaggaag acgaccaatg tgtgaacacg tctttccttt gggtttccat ggtaatctct
     7141 gtggcactgt gccagttgtg tggggacata gctgcatgat ttctaagcac tcaagcaata
     7201 tgcacagccc tattttgcct tccacttgat cagttatgat tctgacgttg ctatcttgtt
     7261 tttccttcct tctccatgaa gacacccaca aatgttaatt gtgtttttat aaaagactct
     7321 tgtactatga aatgtgttca gttctgagta tgtgactgtc atctagcttc attcacatcc
     7381 ctagtgttac tgaggatgct agaagtgcag ccagctatct ggagagcccc aggaaatcct
     7441 agataagagg cagccattca aaacttaccc aaactttgta tttcatgagg ataaaattgt
     7501 gtgt
//
