LOCUS       NM_027356                996 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus UFM1-specific peptidase 1 (Ufsp1), mRNA.
ACCESSION   NM_027356
VERSION     NM_027356.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Yang,R., Wang,H., Kang,B., Chen,B., Shi,Y., Yang,S., Sun,L.,
            Liu,Y., Xiao,W., Zhang,T., Yang,J., Zhang,Y., Zhu,M., Xu,P.,
            Chang,Y., Jia,Y. and Huang,Y.
  TITLE     CDK5RAP3, a UFL1 substrate adaptor, is crucial for liver
            development
  JOURNAL   Development 146 (2) (2019)
   PUBMED   30635284
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 996)
  AUTHORS   Tatsumi,K., Sou,Y.S., Tada,N., Nakamura,E., Iemura,S., Natsume,T.,
            Kang,S.H., Chung,C.H., Kasahara,M., Kominami,E., Yamamoto,M.,
            Tanaka,K. and Komatsu,M.
  TITLE     A novel type of E3 ligase for the Ufm1 conjugation system
  JOURNAL   J Biol Chem 285 (8), 5417-5427 (2010)
   PUBMED   20018847
REFERENCE   3  (bases 1 to 996)
  AUTHORS   Tamplin,O.J., Kinzel,D., Cox,B.J., Bell,C.E., Rossant,J. and
            Lickert,H.
  TITLE     Microarray analysis of Foxa2 mutant mouse embryos reveals novel
            gene expression and inductive roles for the gastrula organizer and
            its derivatives
  JOURNAL   BMC Genomics 9, 511 (2008)
   PUBMED   18973680
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 996)
  AUTHORS   Ha,B.H., Ahn,H.C., Kang,S.H., Tanaka,K., Chung,C.H. and Kim,E.E.
  TITLE     Structural basis for Ufm1 processing by UfSP1
  JOURNAL   J Biol Chem 283 (21), 14893-14900 (2008)
   PUBMED   18321862
  REMARK    GeneRIF: loop between beta3 and alpha2 in addition to the
            C-terminal region of Ufm1 plays a role in binding to UfSP1
REFERENCE   5  (bases 1 to 996)
  AUTHORS   Kang,S.H., Kim,G.R., Seong,M., Baek,S.H., Seol,J.H., Bang,O.S.,
            Ovaa,H., Tatsumi,K., Komatsu,M., Tanaka,K. and Chung,C.H.
  TITLE     Two novel ubiquitin-fold modifier 1 (Ufm1)-specific proteases,
            UfSP1 and UfSP2
  JOURNAL   J Biol Chem 282 (8), 5256-5262 (2007)
   PUBMED   17182609
REFERENCE   6  (bases 1 to 996)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   7  (bases 1 to 996)
  AUTHORS   Wilson,M.D., Riemer,C., Martindale,D.W., Schnupf,P., Boright,A.P.,
            Cheung,T.L., Hardy,D.M., Schwartz,S., Scherer,S.W., Tsui,L.C.,
            Miller,W. and Koop,B.F.
  TITLE     Comparative analysis of the gene-dense ACHE/TFR2 region on human
            chromosome 7q22 with the orthologous region on mouse chromosome 5
  JOURNAL   Nucleic Acids Res 29 (6), 1352-1365 (2001)
   PUBMED   11239002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK012343.1.
            
            [WARNING] On Jun 6, 2024 this sequence was replaced by NM_027356.3.
            
            On Apr 6, 2007 this sequence version replaced NM_027356.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK012343.1, BC087958.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-996               AK012343.1         2-997
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 76.33 cM"
     gene            1..996
                     /gene="Ufsp1"
                     /gene_synonym="2700038N03Rik; D5Ertd655e"
                     /note="UFM1-specific peptidase 1"
                     /db_xref="GeneID:70240"
                     /db_xref="MGI:MGI:1917490"
     exon            1..996
                     /gene="Ufsp1"
                     /gene_synonym="2700038N03Rik; D5Ertd655e"
                     /inference="alignment:Splign:2.1.0"
     CDS             122..775
                     /gene="Ufsp1"
                     /gene_synonym="2700038N03Rik; D5Ertd655e"
                     /codon_start=1
                     /product="ufm1-specific protease 1"
                     /protein_id="NP_081632.1"
                     /db_xref="CCDS:CCDS19764.1"
                     /db_xref="GeneID:70240"
                     /db_xref="MGI:MGI:1917490"
                     /translation="MTAALPSTLELLKDVHLGLPVPCHDPARLALLSGHYLYYHYGCD
                     GLDDRGWGCGYRTLQTLCSWPGGQSSGVPGLPALQGALEAMGDKPPGFRGSRNWIGCV
                     EASLCLEHFGGPQGRLCHLPRGVGLRGEEERLYSHFTTGGGPVMVGGDADAQSKALLG
                     ICEGPGSEVYVLILDPHYWGTPKNRCELQAAGWVGWQKVKSVFDSNSFYNLCFTRNL"
     polyA_site      996
                     /gene="Ufsp1"
                     /gene_synonym="2700038N03Rik; D5Ertd655e"
                     /note="putative"
ORIGIN      
        1 gcctgtggaa tcatctctcc tgccgctagc ctgcttgctg agagttctcc ggttctacgt
       61 gcccacactg cccgtagcta gtcccagaaa acaccaggaa cccggaattg gccctgcctc
      121 gatgacagct gctctaccga gcaccctgga gctgctgaag gacgtgcacc tgggcctgcc
      181 tgtgccctgc catgatcccg cccgactggc cctcctctca ggccactacc tttactatca
      241 ctatggttgc gatggactgg atgaccgtgg ctggggatgc ggctaccgca ccctgcagac
      301 gctgtgctcc tggccagggg gccagtcctc gggcgtgcct ggactgccag ccttgcaggg
      361 agccctagag gccatgggcg acaagccccc cggattccgg ggctcccgta actggatcgg
      421 ctgtgtagag gccagtctct gcctagaaca cttcggagga cctcaagggc gcctatgcca
      481 cttgccccgc ggagtagggc ttaggggaga agaggagcgg ctttattcac actttacaac
      541 gggtgggggc ccagtaatgg taggaggaga tgcagatgcc cagtccaagg ccctgctggg
      601 gatctgtgag gggccaggtt cagaagtcta tgtcttgata ctggacccac actactgggg
      661 cactccaaaa aaccgttgtg aactacaagc tgctggatgg gtgggctggc aaaaggtaaa
      721 aagcgtcttt gattccaatt ccttctacaa cttgtgcttc accagaaatc tctgaatcac
      781 cacgccctac ctgcaccgtt gggtagatcc cagaactgag actaaacaca gccacctatt
      841 tacttcgcac aggcccccac cgcgatcaag tttgggcctg gcacaatgat acgggcaggt
      901 gaatctgagt tcaaagccaa cttggtctac acagcaaggc caagctggaa ttagagatac
      961 tgttctgaaa aataataaat tggcgtaatt cagctt
//
