LOCUS       NM_145500               1527 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ubiquitin domain containing 1 (Ubtd1), mRNA.
ACCESSION   NM_145500
VERSION     NM_145500.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Srivastava,U., Paigen,B.J. and Korstanje,R.
  TITLE     Differences in health status affect susceptibility and mapping of
            genetic loci for atherosclerosis (fatty streak) in inbred mice
  JOURNAL   Arterioscler Thromb Vasc Biol 32 (10), 2380-2386 (2012)
   PUBMED   22837474
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC140193.3 and AC133503.4.
            
            On Mar 21, 2007 this sequence version replaced NM_145500.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK078479.1, BC016129.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-246               AC140193.3         154524-154769
            247-474             AC133503.4         116184-116411       c
            475-1527            AC133503.4         113659-114711       c
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 35.56 cM"
     gene            1..1527
                     /gene="Ubtd1"
                     /note="ubiquitin domain containing 1"
                     /db_xref="GeneID:226122"
                     /db_xref="MGI:MGI:2385092"
     exon            1..246
                     /gene="Ubtd1"
                     /inference="alignment:Splign:2.1.0"
     CDS             177..860
                     /gene="Ubtd1"
                     /codon_start=1
                     /product="ubiquitin domain-containing protein 1"
                     /protein_id="NP_663475.1"
                     /db_xref="CCDS:CCDS29819.1"
                     /db_xref="GeneID:226122"
                     /db_xref="MGI:MGI:2385092"
                     /translation="MGNCVGRQRRERPAAPGHPRKRAGRNEPLKKERLKWKSDYPMTD
                     GQLRSKRDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTL
                     CECYDELGNRYQLPIYCLSPPVNLLLEHTEEESLEPPEPTPSVRREFPLKVRLSTGKD
                     VRLNASLPDTVGQLKRQLHSQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVI
                     INQPPPPQD"
     exon            247..474
                     /gene="Ubtd1"
                     /inference="alignment:Splign:2.1.0"
     exon            475..1527
                     /gene="Ubtd1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcaaagtttg tggcgaagcc ggcgtcgggc agagcgctcc ccaggggaga tccaggagct
       61 ctcgatgtcg ggctgcggga gtcgttgacc cggggacgcc gcggttcggg gcagcagcgt
      121 ggagcagccg gccgaccgcc gcctctggtg catgggggac cggctgagaa gccagcatgg
      181 gcaactgcgt ggggagacag cgccgggaga ggccggctgc tccgggacac ccccgcaagc
      241 gagcaggtcg caatgagccc ttgaagaagg agcggctcaa gtggaagagt gactatccca
      301 tgactgatgg gcagctgcgg agcaaacgag atgagttctg ggacacagca cctgcctttg
      361 agggccgcaa ggagatctgg gatgccctca aggctgctgc ctatgctgct gaagctaatg
      421 accatgagct ggctcaggcc atcctggatg gagccagcat caccctgcct catggaactc
      481 tttgtgaatg ctatgacgag ctgggtaacc gctatcaact gcccatctat tgcctgtccc
      541 cacctgtgaa cttgctgctg gagcacacgg aggaggagag cctggagcct cccgagccca
      601 cccctagtgt gcgccgtgaa ttcccactga aagtgcgcct ctccacaggc aaggacgtga
      661 ggctcaatgc cagcctgcct gacacggtgg ggcaactcaa gaggcagctg cacagccagg
      721 agggcattga gccatcctgg cagagatggt tcttctctgg gaagctgctt acagaccgca
      781 caaggctcca ggaaacaaag attcaaaaag acttcgtcat ccaggtcatc atcaaccagc
      841 ccccaccacc ccaggactga cggactgacg gactgacggc accaactcct aggaaaagag
      901 gccatggggg gccctgcagg ctgtggggcc cagtcctgcc gccttccagt gctgctgtct
      961 tcttcagggg cgcctcccac cgccctgctg tatggctctt agtgagctgc gaagggactt
     1021 gccctctggg gcactggatc caccagtgct cagcacccag ggagcagtgc tgcctgccac
     1081 acacaggcct tgccaacctt ggagaaaagg cacatggcac tctccaccac aggttggagc
     1141 catgggggcc gtcctggcga cctgtcatct ggtgccacgc tgtgctcact ccagttttct
     1201 gctcagggtt ggaagcaatt gctgtctccc ctttatccct caccatgact ctgccctggg
     1261 cacagtgcca gtcccctgga tggggaggga gcccggtggg ccccagggct taaggagctt
     1321 caggtgggcc tctctgcctc tccctgcacc cagcacaatc tgcagagatg aggcgggtgg
     1381 ctggatagcc aggcttcatg gcaggggttt gcacagggct gtccccaact gtaacccagg
     1441 cagggtgggg tccgaagcct ggtcatagcc cagcggggcc ctgtgtacag acacatctgc
     1501 attttatcaa taaagccttt gctcctc
//
