LOCUS       XM_030248763            8725 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ubiquitin protein ligase E3 component
            n-recognin 5 (Ubr5), transcript variant X8, mRNA.
ACCESSION   XM_030248763
VERSION     XM_030248763.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030248763.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8725
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..8725
                     /gene="Ubr5"
                     /gene_synonym="Edd; Edd1"
                     /note="ubiquitin protein ligase E3 component n-recognin 5;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 mRNAs, 254 ESTs, 1403 long SRA reads, 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 37 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:70790"
                     /db_xref="MGI:MGI:1918040"
     CDS             1177..6609
                     /gene="Ubr5"
                     /gene_synonym="Edd; Edd1"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase UBR5 isoform X5"
                     /protein_id="XP_030104623.1"
                     /db_xref="GeneID:70790"
                     /db_xref="MGI:MGI:1918040"
                     /translation="MMRRSLRAAGLGRHEAGASSSDHQDPVSPPIAPPSWVPDPPSMD
                     PDGDIDFILAPAVGSLTTAATGSGQGPSTSTIPGPSTEPSVVESKDRKANAHFILKLL
                     CDSAVLQPYLRELLSAKDARGMTPFMSAVSGRAYPAAITILETAQKIAKAEVSASEKE
                     EDVFMGMVCPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCC
                     TECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLTATNLVT
                     LPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTASPEDSDMPDHDLEPPRF
                     AQLALERVLQDWNALRSMIMFGSQENKDPLSASSRIGHLLPEEQVYLNQQSGTIRLDC
                     FTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAIAVTMRFLRSVARVFVILS
                     VEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFT
                     LASTSIDAMQGSEELFSVEPLPPRPSSDQASSSSQSQSSYIIRNPQQRRISQSQPVRG
                     RDEEQDDIVSADVEEVEVVEGVAGEEDHHDEQEEHGEENAEAEGHHDEHDEDGSDMEL
                     DLLAAAETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSS
                     DSDSSSSQSDDIEQETFMLDEPLERTTNSSHANGAAQAPRSMQWAVRNPQHQRAASTA
                     PSSTSTPAASSAGLIYIDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAY
                     SIVIRQISDLMGLIPKYNHLVYSQIPAAVKLTYQDAVNLQNYVEEKLIPTWNWMVSVM
                     DSTEAQLRYGSALASAGDPGHPNHPLHASQNSARRERMTAREEASLRTLEGRRRATLL
                     SARQGMMSARGDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMN
                     QQTTLDTPQLERKRTRELLELGIDNEDSEHENDDDTSQSATLNDKDDDSLPAETGQNH
                     PFFRRSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSS
                     AGSGKCIVEVTMDRNCLEVLPTKMSYAANLKNVMNMQNRQKKEGEEQSLLAEEADSSK
                     PGPSAPDVAAQLKSSLLAEIGLTESEGPPLTSFRPQCSFMGMVISHDMLLGRWRLSLE
                     LFGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNQQSRDLSLEVKVDRDRDL
                     LIQQTMRQLNNHFGRRCATTPMAVHRVKVTFKDEPGEGSGVARSFYTAIAQAFLSNEK
                     LPNLDCIQNANKGTHTSLMQRLRNRGERDREREREREMRRSSGLRAGSRRDRDRDFRR
                     QLSIDTRPFRPASEGNPSDDPDPLPAHRQALGERLYPRVQAMQPAFASKITGMLLELS
                     PAQLLLLLASEDSLRARVDEAMELIIAHGRENGADSILDLGLLDSSEKVQENRKRHGS
                     SRSVVDMDLEDTDDGDDNAPLFYQPGKRGFYTPRPGKNTEARLNCFRNIGRILGLCLL
                     QNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLILASQSSDADAVFSAMD
                     LAFAIDLCKEEGGGQVELIPNGVNIPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKG
                     LLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKRWFW
                     SIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLY
                     VPLYSSKQILKQKLLLAIKTKNFGFV"
ORIGIN      
        1 aggtgctgaa ggtagatggt gcctatgtcg ctgtaaagtt tccaggaaca tctactaaca
       61 ccacctgtca gaacagctct ggtccagacg ccgacccttc ctcgctcctg caggactgca
      121 ggctgcttcg aattgatgag ctgcaggttg tcaaaacggg cggcacccca aaagttcccg
      181 actgttttca gaggactccc aaaaagcttt gtatacccga gaagactgaa atactagcag
      241 taaatgtgga ttccaaaggt gtccatgctg ttctgaagac tggaagctgg gttcggtact
      301 gtgtctttga tcttgccaca gggaaggctg aacaagagaa taatttccca acaagcagtg
      361 ttgcttttct tggtcaggat gagaggagtg tcgctatctt cactgctggg caggaatctc
      421 ctattgttct tcgagatgga aatggtacta tctacccaat ggccaaggat tgcatgggag
      481 gaatacggga tcctgactgg cttgatctcc caccaatcag tagtcttggg atgggtgtac
      541 attctttaat aaatcttcct gccaactcaa caatcaaaaa gaaagcagct attatcatca
      601 tggctgtaga gaagcaaacc ttaatgcagc acattctcag atgtgactac gaggcctgcc
      661 gacagtatct cgtgaatctg gagcaagccg tggttttaga gcagaacctg cagatgttac
      721 agacgttcat cagccacaga tgtgatggga accggaacat tttacatgct tgtgtatcag
      781 tttgctttcc aaccagcaat aaggaaacta aagaagaaga ggaagctgag cgctcagaaa
      841 gaaatacatt tgctgaaagg ctttctgctg tggaggccat tgcaaatgca atatcagttg
      901 tttcaagtaa cggcccaggt aatcgggctg gatcatcaaa tagtcgaagt ggtatatttg
      961 aacatgactg gattctaagg cttctgtagc atggacataa cgtgcttaca aagaggaaat
     1021 tacaccatcc ttgaattctt ccatattgtc agaaaacacg atgactccgg gcaagccttt
     1081 gtgaagaaat gtcaaaaccc tgaatcttgg cagccaaggt ggcctcgcct cagtgctgtc
     1141 ctcagtggct gaggatccag tttgagatta cgagaaatga tgagacgttc attgagagca
     1201 gctggtttgg gtagacatga ggctggagct tcatccagtg accaccagga tccagtttca
     1261 ccccccatag ctccccctag ctgggttcct gaccctcctt caatggatcc tgatggtgat
     1321 attgatttta tcctggcccc cgctgtggga tctcttacca cagcagcgac tggcagtggt
     1381 caaggaccca gcacctccac cattccaggt ccttccacag agccatctgt agtagaatcc
     1441 aaggatcgaa aggcaaacgc acatttcata ttaaaattac tatgcgacag tgcggttctg
     1501 cagccttatc tacgagagct tctttctgcc aaggatgcaa gaggaatgac cccgtttatg
     1561 tcagctgtaa gtggccgggc ttatcctgct gcaatcacca tcctagaaac agcccagaag
     1621 attgccaaag ctgaagtatc tgcaagtgaa aaggaggaag atgtgttcat gggaatggtt
     1681 tgcccgtcag gtaccaaccc tgacgactcc cctttgtatg tcttatgttg caacgacacc
     1741 tgcagcttta cctggactgg agcagagcac attaaccagg acatttttga atgtcggact
     1801 tgtggtttac tggagtcgct ttgttgttgt acagaatgtg caagggtttg tcataaaggg
     1861 cacgattgca aactcaagag gacttcacca acagcttatt gtgattgttg ggagaaatgt
     1921 aaatgtaaaa cattgattgc tggacagaag tctgctcgtc ttgatctact ttatcgcctg
     1981 cttactgcta caaatctggt caccctacca aacagtaggg gagagcacct tttgctgttc
     2041 ttagtacaga ccgtggccag gcagacagtg gagcactgtc agtataggcc tccacgaatc
     2101 agggaggatc gcaacaggaa aacagccagt cctgaagatt cagatatgcc tgaccatgac
     2161 ttagagcccc caaggtttgc ccagcttgcc ctagagcgcg tccttcagga ctggaatgct
     2221 ttgagatcta tgattatgtt tgggtcacaa gagaacaaag atcctctgag tgccagcagc
     2281 aggataggcc atcttttgcc agaagagcag gtctacctca accagcagag cggcacgatt
     2341 cggctcgact gtttcactca ttgccttatt gtcaagtgta cagcagatat tttgctttta
     2401 gatactctgc taggcacctt agtaaaagaa ctccaaaaca agtacacacc cggacgccgg
     2461 gaagaagcaa ttgccgtgac aatgaggttt ctacgatctg tggcaagagt gtttgtcatt
     2521 cttagtgtgg aaatggcttc gtccaaaaag aaaaacaact ttattccaca gccaattgga
     2581 aaatgcaaac gtgtgtttca agcactgctt ccttatgctg tagaagaatt gtgtaatgtg
     2641 gcagagtctc tgattgttcc tgtcagaatg gggattgccc ggccgacagc accgtttact
     2701 ctggccagta ctagcataga tgccatgcag ggcagtgaag aattattttc agtagaacca
     2761 ttaccaccac ggccgtcatc agatcaggca agcagctcca gtcagtctca gtcatcttac
     2821 atcattcgga acccacagca gaggcgcatc agccagtcac agcccgtcag aggccgagac
     2881 gaggagcagg atgatattgt gtcagcagac gtggaagagg ttgaggtggt ggaaggcgtg
     2941 gctggagagg aggatcatca tgatgaacag gaagagcacg gggaagagaa tgctgaggct
     3001 gagggacatc acgatgagca tgatgaagac ggaagtgaca tggagctaga tttgttagca
     3061 gcagctgaaa cggaaagtga cagtgaaagt aaccatagta accaagataa tgctagtggg
     3121 cgcagaagtg ttgtcaccgc agccactgct ggctcagaag caggagcgag cagtgttcct
     3181 gccttttttt ctgaagatga ctctcagtca aatgactcaa gtgactctga cagcagtagc
     3241 agtcagagtg atgacataga gcaggagacc tttatgctcg atgagccact agaaaggaca
     3301 acgaatagct cccatgcaaa tggtgctgcc caggctcctc gctccatgca gtgggctgtc
     3361 cgaaatccgc agcatcagcg agcagcaagc acagctccgt ccagcacatc tacgccagca
     3421 gcaagttctg caggtttgat ttatattgat ccttcaaatt tacgccggag cggcaccatc
     3481 agtacaagtg ctgcagcggc agcagctgct ttggaagcta gcaatgccag cagctactta
     3541 acatctgcaa gcagtttagc cagggcttac agcattgtca tcagacaaat ctcggacttg
     3601 atgggcctta tccctaagta taatcaccta gtatactctc agattccagc agctgtgaaa
     3661 ttgacttacc aagatgcagt caacttacag aactatgtag aagaaaagct tattcctacg
     3721 tggaactgga tggtcagtgt tatggattct actgaagctc aattacgtta tggttctgca
     3781 ctagcatctg ctggtgaccc aggacaccca aatcatcccc ttcatgcctc tcagaattca
     3841 gctcgaagag agaggatgac tgcacgggaa gaggccagtc taagaacgct tgaaggcaga
     3901 cgacgtgcta cattgctgag cgcccgccag ggaatgatgt ctgctcgagg agactttctc
     3961 aattatgctc tgtctttaat gagatctcat aatgatgagc attctgatgt tcttccagta
     4021 ttggatgtgt gctcattgaa acatgtggca tatgttttcc aagcccttat atactggatt
     4081 aaagcaatga atcagcagac aacattagac actcctcaac tggaacgcaa aaggacacga
     4141 gaacttctgg aactgggtat tgataatgaa gattcagaac atgaaaatga tgatgacacc
     4201 agtcaaagtg ctactttgaa tgataaggat gacgactctc ttcctgcaga aactggccaa
     4261 aaccatccat ttttccgacg ttcagactct atgacattcc ttggatgtat acctccaaat
     4321 ccatttgaag tgcctttggc tgaagccata cccttggctg atcagccaca tttgttgcag
     4381 ccaaatgcta gaaaggaaga tctttttggt cgcccaagtc agggtcttta ttcctcatct
     4441 gccggaagtg ggaaatgcat agtagaggtt acaatggaca gaaattgtct cgaggttctt
     4501 ccaactaaaa tgtcttatgc tgccaatcta aaaaatgtaa tgaacatgca aaaccggcag
     4561 aagaaagaag gggaagaaca gagcctgctg gccgaagaag ctgacagttc aaagccaggt
     4621 ccatccgctc ctgatgttgc tgcccagttg aaaagcagtt tactagcaga gataggactc
     4681 acggaaagtg aagggccccc ccttacatct ttcaggcctc agtgcagttt catgggcatg
     4741 gttatctccc atgacatgct gctgggacgc tggcgcctgt ctttagaact gttcggcaga
     4801 gtattcatgg aagatgttgg tgcagagcct ggatcgattt taactgaatt gggtggtttt
     4861 gaggtaaaag aatcaaagtt ccgtagagag atggaaaaac tgagaaacca gcaatcaaga
     4921 gatttatcac tagaggtaaa ggtcgatcgc gatcgggatc ttctcattca gcagactatg
     4981 agacagctta acaaccattt tggccgaaga tgtgctacca cgccaatggc tgtgcacaga
     5041 gtcaaagtca cctttaagga tgaaccagga gagggcagtg gtgtagcaag aagtttctat
     5101 acagccattg cacaagcgtt tttatcaaat gaaaaattgc caaatctaga ttgtatccaa
     5161 aatgccaaca aaggtactca tacaagttta atgcaaagat tgaggaacag aggtgaaaga
     5221 gaccgggaga gagagagaga acgggaaatg aggaggagca gtggcttgcg tgcaggatct
     5281 cgaagagaca gggatagaga cttcaggaga cagctctcca ttgacaccag gcctttcaga
     5341 cctgcttctg aggggaatcc tagtgatgac cctgaccctc ttccagctca tcggcaggca
     5401 cttggagaga ggctttaccc ccgagtgcaa gcaatgcagc ccgcatttgc aagtaaaatc
     5461 actggcatgc tgttggagtt atccccagct cagctgcttc tccttctagc aagtgaagat
     5521 tctctgaggg cgagagtcga cgaggccatg gaactcatta ttgctcatgg acgggaaaat
     5581 ggagctgaca gtattttgga cctcggatta ttagactctt cagaaaaggt acaggaaaac
     5641 agaaagcgcc atggctctag tagaagtgta gtggatatgg atttagagga cacagatgat
     5701 ggtgatgaca acgctccctt gttttaccaa cctgggaaga gaggatttta tactccgaga
     5761 cctggcaaaa acacagaagc aaggctgaat tgtttcagaa acatcggcag gattcttgga
     5821 ctatgtctgt tgcaaaatga actatgtcct atcacattga ataggcatgt aattaaagtg
     5881 ttgcttggta gaaaagtcaa ctggcatgac tttgcttttt tcgaccctgt aatgtatgag
     5941 agtttacgac aactgatcct tgcatctcag agttcagatg ctgatgctgt tttctcagca
     6001 atggatttgg catttgcaat tgacctgtgt aaagaagagg gtggaggaca ggttgaactt
     6061 attccaaatg gtgtaaatat accagtcact ccgcagaatg tatatgagta tgtaaggaaa
     6121 tatgcagagc atagaatgtt ggtggttgca gaacagccat tgcacgcaat gagaaagggt
     6181 ctactagacg tgcttccaaa aaattcctta gaagacttaa cagctgagga cttccggctc
     6241 ttggtgaacg gctgtggtga agtcaatgtg cagatgctga tcagtttcac ttctttcaat
     6301 gatgagtcag gagaaaatgc tgagaagctc ctccagttca aacggtggtt ctggtcaata
     6361 gtagagaaaa tgagcatgac agaacggcag gacctggttt acttctggac atctagccca
     6421 tcattgccag ccagtgaaga aggttttcag cctatgccct cgatcacaat aagaccacca
     6481 gatgaccaac atcttcctac tgcaaatact tgtatttctc gactttatgt cccactctat
     6541 tcctctaaac agattctcaa acaaaaatta ctactcgcca ttaagaccaa gaattttggt
     6601 tttgtgtaga gtataaaaag tgtgtattgc tgtgtaatat tactagctaa ttttgtagat
     6661 tttttttccc atttgtctat aaaagtttat ggaagttaat gctgtcataa cccccacccc
     6721 accccacccc cggtggtacc ttaaagagat taaatgcaaa cattccttgc tgagtttgta
     6781 gcttaaaggc ctgagaagca ctggcacctt ttctctatga tggtttgcta gtcgccaact
     6841 tctaggtcta accccagcca aagatgacag cagaacaaca taatttacac tgtgatttat
     6901 cttttttgct gagggggaaa aatgtaaaat gttctgaaaa ttcactgctg cctttgtgga
     6961 aagtgtttca gcaaaggttc ttgtatagag ggaataggga atttcaaaat aaaaaattaa
     7021 gtatgttctg tgttttcatt ttagcttttt tatggtgtta tttgtggttg gctgcaattg
     7081 tgtatcatgt atatggaact tgtaaaaagt tcttgacatt cggattttag agacaaaacc
     7141 acttttacct ataaaaacct cacttttagt gtgggttatt tcagctacat tgagctctag
     7201 gatactaaat acactaatag tttgcatgta atgtgttcat ttgagagagg cacttttctg
     7261 tacataaaat gggccgacgc acagtacctt gccacagtca ccttttttct ttgtacccct
     7321 ctttcagtgc aggtggatag gtcacactgc acttgagtgc taaccagatg tctgtactaa
     7381 ggttatgtgt actcagcctg ggcactttct gataactgta aaatgtttta taagatcatg
     7441 aatactgaaa attttaaatt ttggagaatt ttaaatgttc ttgagcagct taactacttt
     7501 tgtatctagc cttttttttt aagtatcttg ttacatttta cttttttaaa taaattacag
     7561 aagaaatgtc aagtaacatt gaagaaacag tttttattta tatagttgta cattttttaa
     7621 gctaggggca atgcactgac atggttatat tcatactttt tttttaagtt tatatacatg
     7681 tgaactataa gaaagttaag aaaatcagtc cacattttac agttagcaga gaatcctaaa
     7741 tggcactcag ccaggccttt tcgttttaca agtagaagtg tgattagtca gcacagaagt
     7801 tttgagtcaa ctccatgaca ggcatccatc catctatcta tctatctatc tatctatcta
     7861 tctatctatc tatctatcta tctatctatc tatctatcta tctattttta aagatgctct
     7921 gtggtctggg accaataccc ttacatttgt ggactgagag ttttattcag tcagataaca
     7981 aggaattaaa agtccctact aggatttaaa ttagttactt aaatattcaa aaacaattaa
     8041 cgatacctgt cttttcagtg cctgtttagg actcctggcc tttgatagtt ttcatgttta
     8101 aagggactgt gcttttatta tgtaacttcc tttaaaaaac tgaatcacat ggcattctca
     8161 gcccctgttg acacttaaga tataaaaagt atacaccacc atgctgaaat agatatatgt
     8221 aaattagcca aagtgataca atggtttata tgtctaaata tactgaataa gggccaacaa
     8281 acatcaatgt gtctaaaagg aataaaacaa acataaccct cgtgtgcact tgacaggctt
     8341 gataactgtt aaatatgatg aggacactta gaccctaatt gtaagtttat ttttaatagt
     8401 tattaaaaga aagaaaatat ttaaataatg cagtatttaa agtgcaagat atctgaggtc
     8461 ttccatattg gttaaaatgc ttttagtaat agtaagagca tagtaaggtg tttttttttt
     8521 tttttttttt ttttttgaag tttggctact tcctgcatct ccaaaagtgt ggttcaagat
     8581 gctctggagt ggctctggct tactgccaca ggctggagag gatgtttcaa aaggaattct
     8641 tttactactt aatacttgtt cccagacaac atatctgctg taaagatagg tttgctttaa
     8701 taaatgtaac aactgtaaga ctcaa
//
