LOCUS       NM_027634               1911 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus ubiquilin 5 (Ubqln5), mRNA.
ACCESSION   NM_027634 XM_133663 XM_907780
VERSION     NM_027634.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Lu Y, Oura S, Matsumura T, Oji A, Sakurai N, Fujihara Y, Shimada K,
            Miyata H, Tobita T, Noda T, Castaneda JM, Kiyozumi D, Zhang Q,
            Larasati T, Young SAM, Kodani M, Huddleston CA, Robertson MJ,
            Coarfa C, Isotani A, Aitken RJ, Okabe M, Matzuk MM, Garcia TX and
            Ikawa M.
  TITLE     CRISPR/Cas9-mediated genome editing reveals 30 testis-enriched
            genes dispensable for male fertility in micedagger
  JOURNAL   Biol Reprod 101 (2), 501-511 (2019)
   PUBMED   31201419
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Marin I.
  TITLE     The ubiquilin gene family: evolutionary patterns and functional
            insights
  JOURNAL   BMC Evol Biol 14, 63 (2014)
   PUBMED   24674348
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1911)
  AUTHORS   Mootha VK, Bunkenborg J, Olsen JV, Hjerrild M, Wisniewski JR, Stahl
            E, Bolouri MS, Ray HN, Sihag S, Kamal M, Patterson N, Lander ES and
            Mann M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK016497.1.
            
            On or before Jan 12, 2011 this sequence version replaced
            XM_907780.3, XM_133663.6.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK016497.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1911              AK016497.1         2-1912
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.85 cM"
     gene            1..1911
                     /gene="Ubqln5"
                     /gene_synonym="4931431F19Rik"
                     /note="ubiquilin 5"
                     /db_xref="GeneID:70980"
                     /db_xref="MGI:MGI:1918230"
     exon            1..1911
                     /gene="Ubqln5"
                     /gene_synonym="4931431F19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             209..1741
                     /gene="Ubqln5"
                     /gene_synonym="4931431F19Rik"
                     /codon_start=1
                     /product="ubiquilin-3"
                     /protein_id="NP_081910.1"
                     /db_xref="CCDS:CCDS52341.1"
                     /db_xref="GeneID:70980"
                     /db_xref="MGI:MGI:1918230"
                     /translation="MARAREEAGDSQLVSGREPSSRIIRVSVKTPQDCHEFFLAENSN
                     VRRFKKQISKYLHCNADRLVLIFTGKILRDQDILSQRGILDGSTVHVVVRSHLKGSAC
                     TGTLVGPTGQYTHRSEPSAKLGRLAGTSPDLADFFSQRVQLLPAAPESVVQLLEDPLI
                     QGLANEKHANGVHIPETSKTVQKRDPALKFPETLQKPAQSQEVLQEHKQRLEALKAVP
                     GGDNAMHPSCSDIHQVMLSTLALLVASKGHISALELCRGETNNAHSSSDPTTIPATSP
                     LVRTLAQEVSTGGVSQVKGIVSSQASLGCRPGMLDLHSGSDIPCQESQQPLEKVPLTC
                     QPRLSPCVLRLALTVLQQNPSLAHQLATGSPLLHHLPLLPILTNPRALQALLQIEEGL
                     QILSREVPELGPLFRDSAKPRGARGAQETRGRRQAHREDTTQHSLAFLQLFHSLARAC
                     SQSSQTALPTSLFTEGRYQQELEELKALGFANRDANLQALVATDGDIHAAIEMLLGAP
                     QD"
     regulatory      1892..1897
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ubqln5"
                     /gene_synonym="4931431F19Rik"
                     /note="putative"
     polyA_site      1911
                     /gene="Ubqln5"
                     /gene_synonym="4931431F19Rik"
                     /note="putative"
ORIGIN      
        1 aaagagagaa gcagctgccc cccgctatgg gagccaggtg gctgtagggc tacactggca
       61 ggggggacct gcaggacgta ggtgaaagga catcaccgaa cacctactgg tcccttaacc
      121 cgggtgtgct cagtgccaca tcaaagcttc tgcaggtgtg tactccactg tgccctcagg
      181 taaccctgcg tcctcttctt caggaaatat ggcacgagct agggaagaag caggggacag
      241 ccagctggtg tctggtaggg agccatcctc acgtatcatc agagtgtctg tcaagacccc
      301 acaggactgc cacgagtttt ttctggcaga aaatagcaat gtccgccgct ttaagaagca
      361 aatctccaaa taccttcact gtaacgctga ccgattggtg ctcatcttca ctgggaagat
      421 cctccgggat caagacatac tgagccagcg tggcattctt gatggctcta cagtccatgt
      481 ggtagtgagg tctcatttga aagggtcagc ctgtacagga actctggtag gccccacagg
      541 ccagtatacc caccgctcag aaccatcagc caagcttggc cggctggccg ggacctcacc
      601 tgacctagct gatttcttca gccagcgtgt ccaactgctg cctgcggcac cagagtctgt
      661 ggtgcaactc ttggaagatc ctctgattca aggcctggca aatgagaaac atgccaatgg
      721 cgttcacatt ccggaaacct caaaaacggt acagaaacgg gacccagctc tcaaatttcc
      781 ggaaaccctt cagaagcccg cgcaatcgca ggaagttctc caggaacaca agcagaggct
      841 ggaggccctg aaagccgtgc cagggggtga caacgctatg catcccagct gctctgatat
      901 ccatcaggtc atgctctcca ctctggcctt attggtggct tctaaaggcc acatttcagc
      961 cttagagctg tgtaggggag aaaccaacaa tgctcacagc agttctgatc ctaccaccat
     1021 tccagccact tctcctctgg tcaggacctt ggcacaagag gtcagtacag gaggagttag
     1081 ccaggtcaag ggcatagttt caagtcaggc cagtttaggg tgccgacctg gtatgctaga
     1141 cttacactca ggctcagata tcccctgcca agaaagccag cagcccttgg agaaagtccc
     1201 tctaacctgt caaccgagac tctcgccctg tgttctgcgc ctagccttga ctgtcctgca
     1261 gcagaatcca tctctggcac atcagttggc aactggcagt cccctactac atcacttgcc
     1321 acttctcccc atcctcacca accctcgagc gctgcaggca ttgctacaga tagaggaagg
     1381 cctacagata ctatccaggg aggtgcctga gctgggacca ttgtttcggg actcagctaa
     1441 accacgtggg gctagaggag cccaagaaac taggggtaga agacaagccc atagagaaga
     1501 tactacacaa cactccttgg cctttcttca gctcttccat tccttggcca gagcctgttc
     1561 ccagtcttcc caaactgcac tgcccacatc cctctttact gaaggtcggt accagcaaga
     1621 actggaggaa ctgaaggcct tgggttttgc taaccgtgat gcaaacctgc aggcccttgt
     1681 agccacagat ggagatatcc acgccgccat tgagatgctt ctaggggctc cgcaggatta
     1741 gtctctccat ttgatgccca cgattgcacc attctgtggg gaggaaggaa aagggagaag
     1801 gggatggaag gcacttattt tagaaattcc tcttcctcga attatgagca tatttggaca
     1861 gcccttctct cactgcccaa acctgttcta cattaaagaa gattgcttgg g
//
