LOCUS       XM_011248161            5199 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus ubiquitin protein ligase E3B (Ube3b),
            transcript variant X3, mRNA.
ACCESSION   XM_011248161
VERSION     XM_011248161.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Oct 5, 2023 this sequence was replaced by
            NM_001424758.1.
            
            On Sep 21, 2020 this sequence version replaced XM_011248161.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5199
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..5199
                     /gene="Ube3b"
                     /note="ubiquitin protein ligase E3B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     mRNAs, 90 ESTs, 702 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 54 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:117146"
                     /db_xref="MGI:MGI:1891295"
     CDS             2078..3703
                     /gene="Ube3b"
                     /codon_start=1
                     /product="ubiquitin-protein ligase E3B isoform X2"
                     /protein_id="XP_011246463.1"
                     /db_xref="GeneID:117146"
                     /db_xref="MGI:MGI:1891295"
                     /translation="MLMLFCDCSRHLITILDDIEVYEEQISFKLEELVTISSFLNSFV
                     FKMIWDGIVENAKGETLELFQSVHGWLMVLYERDCRRRFAPEDHWLRRDLKPGVLFQE
                     LDKDRRRAQLVLQHIPHVVPHKNRVLLFRNMVIKEKEKLGLVETSSASPHVTHITIRR
                     SRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDP
                     ALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQ
                     MLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDIADLGLTLSYDEDVMGQLVCHE
                     LVPGGKTIPVTDENKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPE
                     LQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPEERAMFLKFVT
                     SCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSST
                     CFNLLKLPNYSKKSVLREKLRYAISMNTGFELS"
ORIGIN      
        1 cccccgtaag ccctagatgg ggggaactct ttttatcaac cgttcccgcc tccccttggc
       61 cgagtcaggc gtttagtccc acttctggat gtttgtttct cctttccgtc tgctaaagaa
      121 gatgacaaga ggaaaggagt cctcacctcc tccatgggca aagaagcagt gcggaactgt
      181 tgtttcccgg aactgaataa ttgcttgctt cccaagaggt gttcggagca caacacccgg
      241 ggcaagatgg cggccgggct tcggccgctg ccccggggct ggcggacctc ggggggatcg
      301 ggctaaggcg gcggtcgctg cggcccggac cccgagtgcg gggcctcgaa cggataaaga
      361 tctccggact gcgggccaga aaacccaact cctcggaagc cagaggctgc aggaggtcac
      421 tgatggtcac ctagcatctc cgctgcacag gcaggtcctc aggcttcgtc gtgtcagttt
      481 gcaaacatgt tcactgtatc tcagacctcc agagcatggt tcatcgacag agcccggcag
      541 gcacgagaag agaggctggt gcagaaggag cgggagcgct cagcggtgac gatccaggcc
      601 ctagtccgca gtttcctctg ccggaggcga ctgcacagag acatcaggaa agagattgat
      661 gagtttttta gtgctgatga gtctgggtcc agtaaaagaa gtgcactttg tatttttaag
      721 attgccagga gactgctgtt tatatgcaaa actaccgagg acagcgagag actggagaag
      781 ttgtgtcgaa gcatcctgaa cagcatggat gccgagaatg agccaaaggt gtggtacgtg
      841 tccctggctc tctccaagga cctcacgctg ctgtggatta agcagatcaa gagcatcctg
      901 tggcactgct gtgagcttct ggggcagctc aagccagaga tcttacagga ctccaggctc
      961 atcacgctgt acctcaccat gcttgtgacc ttcacagaca cttcaacatg gaagattctc
     1021 cggggaaaag gtgagagcct tcggccagcc ctgaaccaca tttgcgcaaa tataatgggc
     1081 catctcaacc agcgtggact ttactctgta ttgcaggtac tgctgacccg aggcctggcc
     1141 aggccccggc cctgtctgtc caaaggcatg ttaacagcag ccttctctct ggccctgcgc
     1201 cctgtggttg ctgcgcagtt ctcagacaat cttatgcgac cattcatcat ccacgtcatg
     1261 tcggtacctg ctctcgtggc tcatctcagc accgtggccc ctgagcgcct cggcgtttta
     1321 gagtcccatg acatgcttcg taaattcatc gtcttcctga gagatagaga ccgatgccgc
     1381 gatgcttgtg agagtttaga aggctgccat accctgtgtc tcatgggcaa tctcctgcac
     1441 ttgggctccc tcagcctcag gctgttagag gaagagatgg atgggtttgt gagcgcgctc
     1501 acgcagatgc tgtgctactg tcagaagtac gtggctcaga agaagtccaa cctgacccac
     1561 tggcaccctg tgctcggctg gttttcccaa cctgtggatt acggcctcaa tgattccatg
     1621 tacctgatca ccaagcagct gcagttcctg tgggcggtgc ctctcatccg cattctcttc
     1681 agtgacatcc tgagcaggaa gctgctggag catgcagagc cggccccggt gcaaccgcag
     1741 ccgtcctcac cgcagacggt gctccccgtg aagagtgagc ctcctcaagc gtgcgtttca
     1801 gaagtcggct tcggttcgga acatcctcag gcctgttggg ggccgccgtg tcgactccgc
     1861 tgaggtgcgg aaggtctgca acatttgcgt gctctaccag acctcgctga cgaccctcac
     1921 ccagatccgc ctgcagatcc tcacaggtct tacgtacctg gatgacctgc tgcccaagct
     1981 ctgggcgttt atctgtgagc tggggcccca cggcgggctc aagctcttcc tggagtgcct
     2041 gaacaatgac actggagagt ccaagcagct cctggccatg ctgatgctct tctgtgactg
     2101 ttcccggcac ctcatcacca tcctcgatga cattgaagtt tatgaagaac agatctcctt
     2161 caagctggaa gagctggtca ccatctcctc gttcctcaat tccttcgtgt ttaagatgat
     2221 ctgggacgga attgtagaga atgccaaggg tgagaccttg gagctgttcc agtccgtcca
     2281 tggctggctg atggtgctgt atgagcgaga ctgccgccgg cgctttgctc cggaggacca
     2341 ctggctacgg agggacctca agcctggtgt gctcttccag gagctcgaca aggaccgaag
     2401 gagggctcag ctggtcctgc agcacatccc ccacgtcgtg cctcacaaga acagagttct
     2461 tctgttccgg aacatggtta tcaaggagaa agagaagctg gggcttgtgg agaccagctc
     2521 tgcctctcct cacgtcaccc acatcaccat ccgaaggtcc cggatgttgg aggacggcta
     2581 cgaacagctc cggcagcttt cccagcatgc catgaagggt gtgatccgag tgaagtttgt
     2641 caacgacctc ggggtggacg aggctgggat tgaccaggat ggtgtcttca aggagtttct
     2701 ggaagagatc atcaagaggg tgtttgaccc cgcactcaac ctgttcaaga caaccagcgg
     2761 ggatgagcgg ctgtacccat cacccacgtc ctacattcac gagaattacc tgcagctctt
     2821 cgagtttgtg gggaagatgc tgggaaaggc agtgtatgag gggatcgtgg tagatgtgcc
     2881 ctttgcctcc ttcttcctga gccagatgct cgggcaccac cacagcgtct tctacagctc
     2941 cgtggatgag cttccctccc tggactcgga gttttataaa aacctcacct ccatcaagcg
     3001 ctacgatgga gacatcgcag acctcgggct gacgctgtct tacgatgaag acgtcatggg
     3061 tcagctcgtc tgccacgaac tggttcccgg agggaagacc atcccggtta cagatgagaa
     3121 caaaattagc tacatccatc tgatggcgca tttccgaatg cacactcaaa ttaaaaacca
     3181 gacagctgct cttatcagtg gcttccgttc catcatcaag cccgagtgga tccgaatgtt
     3241 ctctacccct gagcttcagc gcctcatctc cggggacaac gctgagatag atctggaaga
     3301 cttaaagaag cacacagtgt actacggtgg ctttcatggg agccacaggg tcatcatctg
     3361 gctctgggat atcctggctt ccgacttcac gcctgaagaa agagccatgt tcctgaagtt
     3421 tgtgaccagc tgctcccggc ccccgctcct aggattcgcc tacctcaagc ctccgttctc
     3481 catccgctgt gtggaagtat cagatgacca ggacactggg gataccctgg gcagcgtcct
     3541 caggggcttc ttcaccatcc gcaagaggga gccagggggg cgtctgccca catcttccac
     3601 ttgcttcaac ctgcttaagc tgcccaacta cagcaagaag agcgtactgc gagagaaact
     3661 acgctatgcc atcagcatga acacgggctt tgagctctcc taacacagcc tggtctcgct
     3721 accacagagc ccccaggagt gtggccaggg tacccacagc cctcagaccc tctcaatagc
     3781 catgagacac ccaaggttgg ggatgctaca cagtgccctc catgcactgg ggacagaggg
     3841 ctgatgaaaa taacccccca gttctgccct gtggggcctg agacctgggc ctagtgatta
     3901 cagagcaact cctggagatt ctgtgaggct ttcttctctt gccctctgag gaggacacaa
     3961 ggcctgtgcc tgtgagctcc tccttccgtt ctgaaaactc aggtacggcc tcgccaagcc
     4021 tctatgcaca gcaaagtccc tgcctctacc ctgtccacag tggcctcttc ccaggcaacc
     4081 aagcccagct cctgccaggg aggccactga gcacagtcag ggtctctcct atagggatcc
     4141 aggtggtcca caccacagcc ctccttccca agtcctcagc aggccacgct gtcagggaac
     4201 ccttgctgtc agcccctggc ctgtgcatca gtgtcctagc ttgggaaaga aacccatcgt
     4261 tcccctggag aacagcccat ttctggagta cccagagcct gctcgctctg ggcatctgcc
     4321 ccctattcac cttacggaga accacatgag accctaccta cagtgcccag ccgcctgggc
     4381 agtactttat tccagggact tcagagtccg tccttttgca ctgacaggcc ctgggagctg
     4441 aggatacgtc ccacacatct catctccaca ccgcctctgt tggcgcttgc tcttttgtct
     4501 gggacctcat tctcttttcc cacacactgc gctcctgggc cctccctttc cccatttccc
     4561 ttaagaactt tctccagatt caggatgttg aggcagaggc ccagggctta gtaacctgct
     4621 agtagccact tgtctcctgc ctcatcaggt tcttgtctcc ctcccaccct gatggaggag
     4681 tcctggcccc tcctccactc cgtggagcca gcttagggct acagcgctca aagcaagaaa
     4741 acgccttccc caaggagcct gcacagtggg aagtggccgt gccctgttct cactttagca
     4801 aagatcttgg gctggagcat ggggtaggcc caggaaagcc cctggggttc tggaaggtgg
     4861 ctccagcttc acgtctgcca accatgtgtg ttcccagctt gcccgcagag ccctgtgccc
     4921 cgtgcacagc ctgcacaggt aacacagagc ctgagagtta cagcgggcac acgggagagt
     4981 tagttgtaag caccgatatc aacttgaccc ctttgtcttt gacctagggc tgtctgtcgg
     5041 tcacctagag tctgcttccc ggcagttatg tcatagctgc tgtttgatga catctcagca
     5101 gctcctggtg gcgccagaag gaagcagggg tttttgtttt tgtaggtaac tcgtggacta
     5161 agacttgtca gggctttatt aaatttgtac ttgagcaca
//
