LOCUS       NM_027315               3081 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus ubiquitin-conjugating enzyme E2Q family member 1
            (Ube2q1), mRNA.
ACCESSION   NM_027315
VERSION     NM_027315.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Grzmil,P., Altmann,M.E., Adham,I.M., Engel,U., Jarry,H.,
            Schweyer,S., Wolf,S., Manz,J. and Engel,W.
  TITLE     Embryo implantation failure and other reproductive defects in
            Ube2q1-deficient female mice
  JOURNAL   Reproduction 145 (1), 45-56 (2013)
   PUBMED   23108111
  REMARK    GeneRIF: Ube2q1 is not expressed in the uterus of non-pregnant
            females but its expression is up-regulated during pregnancy. Ube2q1
            is involved in different aspects of female fertility.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Wassler,M.J., Shur,B.D., Zhou,W. and Geng,Y.J.
  TITLE     Characterization of a novel ubiquitin-conjugating enzyme that
            regulates beta1,4-galactosyltransferase-1 in embryonic stem cells
  JOURNAL   Stem Cells 26 (8), 2006-2018 (2008)
   PUBMED   18511602
  REMARK    GeneRIF: GTAP functions as an evolutionarily conserved E2 enzyme,
            which may participate in intercellular adhesion and embryonic
            development.
REFERENCE   3  (bases 1 to 3081)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC102392.8.
            
            On Mar 18, 2008 this sequence version replaced NM_027315.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY112699.1, AK146707.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-430               AC102392.8         150926-151355       c
            431-535             AC102392.8         148783-148887       c
            536-640             AC102392.8         148348-148452       c
            641-691             AC102392.8         147683-147733       c
            692-832             AC102392.8         145395-145535       c
            833-917             AC102392.8         145125-145209       c
            918-978             AC102392.8         144467-144527       c
            979-1069            AC102392.8         144187-144277       c
            1070-1128           AC102392.8         144017-144075       c
            1129-1177           AC102392.8         143869-143917       c
            1178-1273           AC102392.8         143501-143596       c
            1274-1340           AC102392.8         143127-143193       c
            1341-3081           AC102392.8         140967-142707       c
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 39.19 cM"
     gene            1..3081
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /note="ubiquitin-conjugating enzyme E2Q family member 1"
                     /db_xref="GeneID:70093"
                     /db_xref="MGI:MGI:1917343"
     exon            1..430
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            431..535
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            536..640
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            641..691
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            692..832
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            833..917
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            918..978
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1069
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1070..1128
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1129..1177
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1178..1273
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1274..1340
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     exon            1341..3081
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1808..1813
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /note="hexamer: ATTACA"
     polyA_site      1828
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /note="major polyA site"
     regulatory      3037..3042
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
                     /note="hexamer: AATAAA"
     polyA_site      3056
                     /gene="Ube2q1"
                     /gene_synonym="1110002C01Rik; 2310012M18Rik; Gtap; NICE-5;
                     PRO3094; Ube2q"
ORIGIN      
        1 ggcgaagggg ggatcaggaa gtgcggaccg cggcggcggc ggagcccgga gcggaggccg
       61 gaggctcccg gcccgccggc cccggagcgg agcggagcgg aggatgcagc agccgcagcc
      121 gcaggggcag cagcagccgg ggccggggca gcaactgggg gtccaggggg cggcgccggg
      181 ggccgggggc ggcccgggag ggggcccggg gccagggccc tgcctgaggc gggagctgaa
      241 gctgctcgag tccatcttcc accgcggcca cgagcgcttc cgcattgcca gcgcctgcct
      301 ggacgagctg agctgcgagt tcctgctggc cggagccgga ggggccgggg ccggggctgc
      361 gcccggaccc catctcccct cccggggatc ggtgccgggg gaccccgtcc gcatccactg
      421 caacatcacg gaatcatacc ctgctgtgcc ccccatctgg tcggtggagt ccgatgaccc
      481 taacttggct gctgtcttgg agaggctggt ggacataaag aaagggaata ctttgctctt
      541 gcagcatctg aagaggatca tctctgacct gtgtaaactc tacaacctcc ctcagcatcc
      601 tgatgtggaa atgctggatc agcccttgcc agcagagcag tgcacgcagg aagaagtgtc
      661 ttcagaagat gaagatgaag agatgcctga ggatacagaa gacctagatc actatgaaat
      721 gaaagaggaa gagccagccg agggcaagaa gtctgaagat gatggcatcg gaaaagagaa
      781 cctggccatc ctagagaaaa ttaaaaagaa ccagaggcaa gattacttaa atggtgcagt
      841 gtctggctcg gtgcaggcca ctgaccggct gatgaaggag ctcagggata tataccgatc
      901 acagagtttc aaaggcggaa actatgcagt cgaactcgtg aatgacagtc tctatgactg
      961 gaatgtcaaa ctcctcaaag ttgaccagga tagcgctttg cacaatgatc ttcagatcct
     1021 gaaggagaag gaaggagcag acttcatcct acttaacttc tcctttaaag ataacttccc
     1081 ctttgaccca ccgttcgtca gggttgtgtc tccagtcctc tctggagggt atgttctggg
     1141 tggaggtgcc atctgcatgg aacttctcac caagcagggc tggagcagtg cctactccat
     1201 agagtccgtg atcatgcaga tcagcgccac gctggtgaag gggaaagcac gggtgcagtt
     1261 tggagccaac aaatctcagt atagcctgac gagagcacag cagtcctaca agtccttggt
     1321 gcagatccat gaaaaaaacg gctggtacac acccccaaag gaagatggct agccctggag
     1381 tctcaccctt cctcctcccc aggcaccact ggaccaatta cctttgaatg ctgtgtttgg
     1441 atctcacgct gcctctggtt tccccccctc atttttcctg gacgtgatag ctctgcctat
     1501 tgcaggacaa tgatggctat tctaaacgct aaggaaaaac aacaacccac aacacacact
     1561 gaactgtctc aagtactcaa gactgactac agaccaacca cctcgctgga acccttgcta
     1621 gcaggcattc ttataaagaa actctcaagc ctccttatat tgctggaaac tcagctgtgc
     1681 tccagactag agcctcctta cctatgctat gggtttttaa tttattttct cttatttcat
     1741 gtacactgct ttttttggtt acagtgtatg atggatgtgt atgaaaaaat gtatctttgg
     1801 gaaaacaatt acagtttgtt aatttgaaga tgctggtctt gactcatctt tatttttatt
     1861 cccacatccc ctgactgctg ggtgggggga ggggtgccag gcccaccatg ctttggtagc
     1921 aaggagaagc tgcagagagg ctgcaattcg atgctagcac aagagaaagg ccaagcggaa
     1981 gcactcgcct gatctgaccc tagatttctc ccgaaggcct ctggagcaac cagtacctaa
     2041 actctttgga acagtctggc ttgctgaact acagtgcaga ggcccagaaa catcctgatt
     2101 attagtacct ctttgtacta atctccattt ttgaaatttc caagaaaaag atgagacttg
     2161 agtagctgct tcatgaactc cttttaagtt gagtggggtg gtgccctggc tcctggatgc
     2221 atgaggtttc ctctaatccc aagcaacctg ctgagcggct gtaactcact ggttccctgc
     2281 cttcctgtcc tctcttctca cctctcatct gctttattag attatctaag aaaagacttg
     2341 aactttggat tctttctagc cattcccaag ttgtgggtct actggaaaca gtagctcaat
     2401 gtggttgcat tgtgtagtgg gacctcggct cagctccagg aactgcacag ccggggagaa
     2461 gtctgcagag ccacagctac cagtgttgga cctgctgttg tgagactgca cgcagtacat
     2521 ggagcctgca tctccctctt tgagcttgct gtgggaccac ctgcctgcag actggaggaa
     2581 gactgaagtg acagaggcaa gggacagcca agccaagtcc tggagcttag gaaacccagc
     2641 cctggaacag ttgcctggat gtttgctaat gcttctgaga tgggcattcg agtttggcca
     2701 tcttccccca ctccccatct cttctaggga tttgaatgtc ttgctgcttt agggggatgg
     2761 agagttcacc agtcctactt gatgctgctc taattctgcc tacacccacc aggttagggg
     2821 tgctaataca tggtgaggtt gagacacaga ggatacaagg ggaataagtc attccataga
     2881 actgaaatct atctcatagc ctgtaaggct tccttctgaa cttaacacca gccagggctg
     2941 gcatgtagat tgtgttttta gtaacgtgta ctgtgagctg tcctctgtat aatgtatttt
     3001 gtaatgtatt tttctcatct accaaaggat gaatcaaata aagttattta aatagtttgg
     3061 ctctaataaa cttatttaaa g
//
