LOCUS       NM_176902               1498 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus UBA-like domain containing 2 (Ubald2), mRNA.
ACCESSION   NM_176902
VERSION     NM_176902.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1498)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY734584.1, AK050732.1, AL645861.12 and AW495281.1.
            
            On Sep 14, 2006 this sequence version replaced NM_176902.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK144901.1, AK050732.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-119               BY734584.1         3-121
            120-853             AK050732.1         2-735
            854-962             AL645861.12        186444-186552
            963-1498            AW495281.1         1-536               c
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 81.29 cM"
     gene            1..1498
                     /gene="Ubald2"
                     /gene_synonym="1110014K08Rik; D030012E24Rik; Fam100b"
                     /note="UBA-like domain containing 2"
                     /db_xref="GeneID:319370"
                     /db_xref="MGI:MGI:1914635"
     exon            1..335
                     /gene="Ubald2"
                     /gene_synonym="1110014K08Rik; D030012E24Rik; Fam100b"
                     /inference="alignment:Splign:2.1.0"
     CDS             216..710
                     /gene="Ubald2"
                     /gene_synonym="1110014K08Rik; D030012E24Rik; Fam100b"
                     /note="protein FAM100B; family with sequence similarity
                     100, member B"
                     /codon_start=1
                     /product="UBA-like domain-containing protein 2"
                     /protein_id="NP_795876.1"
                     /db_xref="CCDS:CCDS25666.1"
                     /db_xref="GeneID:319370"
                     /db_xref="MGI:MGI:1914635"
                     /translation="MSVNTDELRHQVMINQFVLAAGCAADQAQQLLQAAHWQFETALS
                     TFFQESNIPNSHHHPQMMCTPSNTPATPPNFPDALAMFSKLRTSEGLQSSSSSPMAAV
                     ACSPPANFSPFWAASPPNHQVPWIPPSSPNTFHLHCPQPTWPPGASQGGAPQKAMAAM
                     DGQR"
     exon            336..398
                     /gene="Ubald2"
                     /gene_synonym="1110014K08Rik; D030012E24Rik; Fam100b"
                     /inference="alignment:Splign:2.1.0"
     exon            399..1482
                     /gene="Ubald2"
                     /gene_synonym="1110014K08Rik; D030012E24Rik; Fam100b"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1482
                     /gene="Ubald2"
                     /gene_synonym="1110014K08Rik; D030012E24Rik; Fam100b"
                     /note="major polyA site"
ORIGIN      
        1 ggattcgaat cgaacgtccg tgtgggagcc ggcggctggc tgggctgcgc gtgggccaat
       61 cagcggcgtc ggctcacggc ccccgaacgt tgggcctggc ggccccgccc cgcgctgttg
      121 tttgcggcgt cggcgcggcc gcgcgagccg aaccacaaca ttcgccgggc ggcggcggag
      181 ctgcgagcgt gagcccgggg cggccgccca gcgccatgtc ggtgaacacg gacgagctgc
      241 ggcaccaggt catgatcaac cagttcgtgc tggccgcggg ctgcgcggcc gatcaggcgc
      301 agcagctgct gcaagcggcg cactggcagt tcgagaccgc cctaagcacg ttctttcaag
      361 aaagcaacat tcccaacagc caccaccacc cgcagatgat gtgtaccccc agcaacaccc
      421 ctgctacacc acccaacttc cctgatgcat tggccatgtt ctccaagctt cgaacctctg
      481 agggcctgca gagcagcagc agcagcccca tggcagccgt ggcctgttcc ccccctgcaa
      541 acttcagccc cttctgggcc gcatccccac ccaatcacca ggtgccctgg atcccgccct
      601 cttcccccaa caccttccat ctccactgcc cacagcccac gtggcccccc ggagcatcgc
      661 aggggggcgc ccctcagaaa gccatggcag ccatggatgg ccagagatga gactggacgc
      721 cactgggctg gagcaggggg cagtccaggg ttgtggggac acagatgagg gctgggaggg
      781 ggggaacgca agagggcggg gggtttcttc acgatcgcac tggaagattt tataagagtt
      841 ttgggggggg ggggacagta aacgtcctga gccacttggg ttcttcagga gtttctctta
      901 gggaaagttt ttttttcctc tttttaatat ataactataa tatatatgaa tataaattta
      961 gctaatgttt gtgagagtgg ggcctgcaca cgtgttcctg tcagaggcaa ggctcacatt
     1021 ccttgccagc acctctttct ctgcccaatt gaggggaaca aaagggtgtt cacagatgga
     1081 gcgagcttgc agccgcgtgg ctgtgctgct ctgtgagaag gcgtgccagc cattaggaag
     1141 ccccaccgcc aaaggaggtg cacccaggag ggtcctcaga atcatggact tctaccccat
     1201 tgctggtaga caattttcat ctctgctggt ggtggcctct tgttgactct gaaacttgtc
     1261 accttgtcac cagctagatg tcaagacttg gctgccctct gatgtgggtg cttctgcccc
     1321 ttccctgttc taactgtccg acaggctccc agtctctgtg tgtccaggcc agaggaccag
     1381 cactcaggag agtctgcctt tggattgagt tcccaaatta gagtcatcgc accagggtgc
     1441 aattttaatt taaaaactta aaagactttt ctaacttccc taaaaaaaaa aaaaaaaa
//
