LOCUS       NM_026861               2168 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus ubiquitin associated domain containing 2 (Ubac2),
            mRNA.
ACCESSION   NM_026861
VERSION     NM_026861.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Choi,J.H., Zhong,X., McAlpine,W., Liao,T.C., Zhang,D., Fang,B.,
            Russell,J., Ludwig,S., Nair-Gill,E., Zhang,Z., Wang,K.W.,
            Misawa,T., Zhan,X., Choi,M., Wang,T., Li,X., Tang,M., Sun,Q.,
            Yu,L., Murray,A.R., Moresco,E.M.Y. and Beutler,B.
  TITLE     LMBR1L regulates lymphopoiesis through Wnt/beta-catenin signaling
  JOURNAL   Science 364 (6440) (2019)
   PUBMED   31073040
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Lin,Q., Donahue,S.L., Moore-Jarrett,T., Cao,S., Osipovich,A.B. and
            Ruley,H.E.
  TITLE     Mutagenesis of diploid mammalian genes by gene entrapment
  JOURNAL   Nucleic Acids Res 34 (20), e139 (2006)
   PUBMED   17062627
REFERENCE   3  (bases 1 to 2168)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY080555.1, AK049109.1 and BC017635.1.
            
            On Mar 25, 2006 this sequence version replaced NM_026861.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK049109.1, SRR1660813.53308.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-52                BY080555.1         1-52
            53-1911             AK049109.1         2-1860
            1912-2168           BC017635.1         1074-1330
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 65.78 cM"
     gene            1..2168
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /note="ubiquitin associated domain containing 2"
                     /db_xref="GeneID:68889"
                     /db_xref="MGI:MGI:1916139"
     exon            1..169
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             139..1176
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /note="phosphoglycerate dehydrogenase like 1;
                     ubiquitin-associated domain-containing protein 2;
                     phosphoglycerate dehydrogenase-like protein 1; UBA
                     domain-containing protein 2"
                     /codon_start=1
                     /product="ubiquitin-associated domain-containing protein 2
                     precursor"
                     /protein_id="NP_081137.2"
                     /db_xref="CCDS:CCDS37019.1"
                     /db_xref="GeneID:68889"
                     /db_xref="MGI:MGI:1916139"
                     /translation="MFTSTGSSGLYKAPLSKSLLLVPSALSLLLTLLLPHCQKFFVYD
                     LHAVKHDLQIWRLICGRIICLDLKDAFCSGLLIYNFRIFERRYGSRKFASFLLGSWVL
                     SALFDFILVEAVQYSLGVTVASNLPSGFLAPVFALFVPFHCSIPRVQVAQILGPLSIT
                     NKTLIYILGLQLFTSGSYIWIVAMSGLISGMCYDRKVLQVHQVLRIPGRMAEFFSWAL
                     EPIFSSSEPTSEARVGMGATVDIQRQQRMEQLDRQLMLSQFAQVRRQRQQQGGMINWN
                     RLFPPLRQRRNINYQDGPRSEQRASPPLEVSEEQVARLMEMGFSRGDALEALRASNND
                     LNVATNFLLQH"
     exon            170..297
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            298..417
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            418..527
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            528..651
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            652..699
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            700..945
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            946..1068
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1069..2154
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2133..2138
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /note="hexamer: AATAAA"
     polyA_site      2154
                     /gene="Ubac2"
                     /gene_synonym="1190008A14Rik; Phgdhl1"
                     /note="major polyA site"
ORIGIN      
        1 ttcctggcgg ctccggagcg cctcgccggg ccgacttcgc tcgctggttg acagtgcgcc
       61 tgcgcggtcg ctgggggctc tccacctctg cctcccctcc ccctgacgcc ccgcgggggc
      121 tccgggcccg gcgggaccat gttcaccagc accggctcca gtgggcttta taaggcacct
      181 ctgtcgaaga gtcttctgct ggtccccagt gccctgtccc tcctgctgac tctcctgctg
      241 cctcactgtc agaagttctt cgtgtatgac ctccatgctg tcaagcacga cttgcagatt
      301 tggaggctga tatgcggaag aataatttgc cttgacttga aagacgcttt ctgtagtggt
      361 cttctcattt ataacttcag aatatttgaa agaagatatg gaagcaggaa gttcgcatcc
      421 ttcttgctgg gttcctgggt cttgtcagcc ttgtttgatt ttatcctcgt ggaagccgtg
      481 cagtattcgc ttggtgtcac agtggccagc aacttacctt ctggattctt ggcgcccgtg
      541 ttcgctctct ttgttccatt tcactgctcc atcccaagag tccaggtggc gcagatcctg
      601 ggcccgttgt ccatcacaaa caagacattg atttatatat tgggactaca gcttttcacc
      661 tctgggtcct acatctggat tgtagccatg agtggactta tctctggcat gtgctatgac
      721 cgcaaagtgc tccaggtcca ccaggtgctc cgcatccctg gcagaatggc cgagttcttc
      781 tcctgggccc ttgagcccat cttctcatct tcagaaccca ccagcgaggc cagggttggg
      841 atgggagcca ccgtggacat ccagagacag cagaggatgg agcagctgga ccggcagctg
      901 atgctctctc agtttgcaca agtgaggcgt caaaggcagc agcagggagg aatgatcaat
      961 tggaaccggc ttttcccccc tttacgtcag cgacgaaata tcaactatca agatggacct
     1021 cggtctgagc agcgagcatc tcctcccctg gaagtttctg aagagcaggt tgcccgcctc
     1081 atggagatgg gattttccag aggggacgcc ttggaggccc tgagggcctc aaacaatgac
     1141 ctcaatgtgg ccaccaactt cctgctgcag cactgacatc cagccactgt atgacagtga
     1201 tgtgcccgcc accacatcag cctgaggacc aagcagaccc cagcacaggt gttctcaaga
     1261 ggagacggtg gttcccacca tacactgtcc ttaaatccaa gatggttgcc gtgtagtatc
     1321 aaataagttt gccattaaat tagcatgtat tttctatctt tattttttta ctgggcattt
     1381 ctcagtgtgg agagccgtca ttcttacgtg ttcaaatgca tgacggttac aggtttcggt
     1441 ggctgtttta tagcaccgca gagagagaca actgtcctga agctcgagtg cagtctgctc
     1501 atcctcacgt cagggaaggg cggcaggcca tgtgacctca gaaaggctgt gtcacactac
     1561 tctgtatgga ctgggttttt tttctcttca gtttgtattc acatctcagt gacagaggga
     1621 gctggagatg agcctcctcc agcctagagt ctgccccaac tcctgctttc agtacagata
     1681 atccagtgct ggtgtgaggt tctagaatgc cccgtgatgc ctacctgggg tcattttgct
     1741 cagaatgcat tacagtggcc acttgggcaa aggagtgaat tggaataaag aaaaaagttg
     1801 cttcagagac ttagtggggc tgtgcagaga gcaggcgctg gccagcaatg gctcagcccc
     1861 ggcctgccca ccctgggcca gcctgcagcc ctccatacac caccagccct tctggcagca
     1921 caccttccct ggccccatcc ttgccccttg tagtgggtga ggcagtgccc actgtgcaga
     1981 cagtcaggga ggtgtaagca ggaggcagcc cctgtgagca agagcagctg taggaattga
     2041 cgactgtccc gtaagcaaac tgcaccgggt gtattctgca cagtgagcag caatgtgtca
     2101 aattgatgca aatctaggtg tgtgatactt acaataaagt ttttatgtgt tttaaaaaaa
     2161 aaaaaaaa
//
