LOCUS       XM_006537782            2636 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus tyrosinase-related protein 1 (Tyrp1),
            transcript variant X2, mRNA.
ACCESSION   XM_006537782
VERSION     XM_006537782.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..2636
                     /gene="Tyrp1"
                     /gene_synonym="b; brown; isa; Oca3; TRP-1; TRP1; Tyrp"
                     /note="tyrosinase-related protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 110
                     mRNAs, 179 ESTs, 4 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:22178"
                     /db_xref="MGI:MGI:98881"
     CDS             292..1953
                     /gene="Tyrp1"
                     /gene_synonym="b; brown; isa; Oca3; TRP-1; TRP1; Tyrp"
                     /codon_start=1
                     /product="5,6-dihydroxyindole-2-carboxylic acid oxidase
                     isoform X1"
                     /protein_id="XP_006537845.1"
                     /db_xref="GeneID:22178"
                     /db_xref="MGI:MGI:98881"
                     /translation="MKSYNVLPLAYISLFLMLFYQVWAQFPRECANIEALRRGVCCPD
                     LLPSSGPGTDPCGSSSGRGRCVAVIADSRPHSRHYPHDGKDDREAWPLRFFNRTCQCN
                     DNFSGHNCGTCRPGWRGAACNQKILTVRRNLLDLSPEEKSHFVRALDMAKRTTHPQFV
                     IATRRLEDILGPDGNTPQFENISVYNYFVWTHYYSVKKTFLGTGQESFGDVDFSHEGP
                     AFLTWHRYHLLQLERDMQEMLQEPSFSLPYWNFATGKNVCDVCTDDLMGSRSNFDSTL
                     ISPNSVFSQWRVVCESLEEYDTLGTLCNSTEGGPIRRNPAGNVGRPAVQRLPEPQDVT
                     QCLEVRVFDTPPFYSNSTDSFRNTVEGYSAPTGKYDPAVRSLHNLAHLFLNGTGGQTH
                     LSPNDPIFVLLHTFTDAVFDEWLRRYNADISTFPLENAPIGHNRQYNMVPFWPPVTNT
                     EMFVTAPDNLGYAYEVQWPEAPRMKPTSLSSLITINAMLRTMRSSRILTTPWSDSRLP
                     IPARSRLGSNLIETQLSTVFPLASFFSSQDRCGLELKHCSPVMTV"
ORIGIN      
        1 gagaagggat tagtgagagc tggaagagag gaccagcccc tcccagtgtg aggaatctgg
       61 cttgggattt actgtctggc agaaaatctc ttcgggcaat taacagctgg catcagggga
      121 aaagcagaca tccaacaaca ctagctctga aggagatcag cagagaaacc ttccagggat
      181 tcatggtact ggtgagcagc tctgtgctgt attttcatct gagcacccct gtcttctcca
      241 tgcaaagagc agcataggag acctgtgttc tgaactcttg cttcgagaag aatgaaatct
      301 tacaacgtcc tccccctagc ctatatctcc cttttcctga tgctgtttta tcaggtttgg
      361 gctcagtttc cacgagagtg tgccaatatt gaggctctga gacgtggggt gtgttgccca
      421 gacctgctcc cttcctctgg accggggact gacccttgtg gctcatcatc aggaagaggc
      481 aggtgtgtgg ctgtgattgc agactcccga ccccacagcc gccattatcc ccacgatggt
      541 aaagatgacc gagaagcctg gcctctgagg ttctttaata gaacatgtca gtgcaatgat
      601 aatttctcag gacacaactg tgggacttgc cgtcctgggt ggagaggagc tgcatgcaac
      661 cagaaaattc tcacagtcag gagaaatctt ctagacttaa gtccagaaga aaagagccac
      721 tttgtcaggg ccttggatat ggcgaagcgc acaactcacc ctcaatttgt cattgccaca
      781 aggaggttag aagacatact gggaccagat ggcaacacac cacaatttga gaacatttcc
      841 gtttataact actttgtttg gacacactat tattcagtca aaaaaacctt cctcgggaca
      901 ggacaggaaa gctttgggga tgtggatttc tctcacgaag gacccgcttt tctcacatgg
      961 cacaggtacc atctgctgca gctggagaga gacatgcagg agatgctgca ggagccttct
     1021 ttctcccttc cttactggaa ttttgcaact gggaaaaacg tctgcgatgt ctgcactgat
     1081 gacttgatgg gatccagaag caacttcgat tctactctta taagccccaa ctctgtcttt
     1141 tctcaatgga gagtggtctg tgaatccttg gaagagtacg ataccctggg aacactttgt
     1201 aacagcactg agggtggacc aatcaggaga aacccagctg gaaatgtagg gagaccagca
     1261 gtgcagcgtc ttcctgagcc acaggatgtc actcagtgct tggaggtccg tgtatttgac
     1321 acacctcctt tttattccaa ttctacagac agttttcgaa atacagtgga aggttacagt
     1381 gctcccacgg gaaaatatga ccctgctgtt cgaagccttc acaacctggc ccacctcttc
     1441 ctgaatggaa cgggaggaca aacccatttg tctcccaatg atcctatttt tgtcctcctg
     1501 cacactttca ctgatgcggt ctttgacgaa tggctaagga ggtataacgc cgatatttct
     1561 accttcccgt tggaaaacgc acctattgga cataacaggc aatacaacat ggtgccattc
     1621 tggcctccag ttaccaacac agaaatgttt gttactgctc cagacaatct gggatatgct
     1681 tatgaagttc aatggccaga agcaccaaga atgaagccaa ccagcctctc ctcactgatc
     1741 actatcaacg ctatgctgag gactatgagg agctcccgaa tcctaaccac tccatggtct
     1801 gatagccgcc tgcccatccc cgcacgcagc aggttgggaa gcaacctgat tgaaacacag
     1861 ctgtcaaccg tatttccttt ggcttccttc ttttcttccc aagatagatg tggtttggaa
     1921 ttaaagcatt gctctccagt gatgacagtt tagactcctt ttaatgggtt ttaataatta
     1981 gttctattga agatggcaaa ttataccagt tgtgtgatat ctgagaggat aattggatga
     2041 acttggtggt attctaaaga tggcctgtat gctgtgaaaa agcaatgctt tgtttacaca
     2101 ggaaaaataa gtttgatgta aaatctctat ttcaaatata tgagtgccca ttcttatgga
     2161 gttaacatgt gaatgcattg ttattgttgg tactaatcaa aagttataaa agcagccatg
     2221 ttgattagtt acaacaaatc acatgacatt ataaacaaat agaatcctga ttatctttct
     2281 gaaactgctc tcattttgct ttcagcgtat tatttggcct caggtgcaag gccaccacaa
     2341 agtcacagtc cttgccacac atggtaaaga cgaaagcttc acttgctgga acacatctgc
     2401 tcttgcatat ttgccaatgt gttccctagc tcagttctct ggacatgaaa ctgcctgggc
     2461 cacagttcac ctctaattct cgtatcttag aggcctgcga ggaaggtatc agtcagagga
     2521 cacaatgttc tgtgcatctt atcaaatgtt gtatttcatt tcaacagcat tgttacacca
     2581 cttatcagcc ttctgtgtat ttcaaaataa atataataaa atcttctttc attggt
//
