LOCUS       NM_175646               1890 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus thioredoxin-like 4B (Txnl4b), mRNA.
ACCESSION   NM_175646
VERSION     NM_175646.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Sun,X., Zhang,H., Wang,D., Ma,D., Shen,Y. and Shang,Y.
  TITLE     DLP, a novel Dim1 family protein implicated in pre-mRNA splicing
            and cell cycle progression
  JOURNAL   J Biol Chem 279 (31), 32839-32847 (2004)
   PUBMED   15161931
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK079533.1 and BY544646.1.
            
            On Sep 20, 2016 this sequence version replaced NM_175646.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK079533.1, AK085226.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-136               AK079533.1         3-138
            137-313             AK079533.1         141-317
            314-1552            AK079533.1         319-1557
            1553-1890           BY544646.1         100-437
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 57.1 cM"
     gene            1..1890
                     /gene="Txnl4b"
                     /gene_synonym="D530025J19Rik; Dim2; DLP"
                     /note="thioredoxin-like 4B"
                     /db_xref="GeneID:234723"
                     /db_xref="MGI:MGI:2443724"
     exon            1..172
                     /gene="Txnl4b"
                     /gene_synonym="D530025J19Rik; Dim2; DLP"
                     /inference="alignment:Splign:2.1.0"
     exon            173..380
                     /gene="Txnl4b"
                     /gene_synonym="D530025J19Rik; Dim2; DLP"
                     /inference="alignment:Splign:2.1.0"
     CDS             249..698
                     /gene="Txnl4b"
                     /gene_synonym="D530025J19Rik; Dim2; DLP"
                     /codon_start=1
                     /product="thioredoxin-like protein 4B"
                     /protein_id="NP_783577.2"
                     /db_xref="CCDS:CCDS40469.1"
                     /db_xref="GeneID:234723"
                     /db_xref="MGI:MGI:2443724"
                     /translation="MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDI
                     LSKTSADLSKMAAIYLVDVDHTPVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKF
                     VGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPIDPKNVPKYDLLYQDI"
     exon            381..532
                     /gene="Txnl4b"
                     /gene_synonym="D530025J19Rik; Dim2; DLP"
                     /inference="alignment:Splign:2.1.0"
     exon            533..1890
                     /gene="Txnl4b"
                     /gene_synonym="D530025J19Rik; Dim2; DLP"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1862..1867
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Txnl4b"
                     /gene_synonym="D530025J19Rik; Dim2; DLP"
                     /note="hexamer: AATAAA"
     polyA_site      1881
                     /gene="Txnl4b"
                     /gene_synonym="D530025J19Rik; Dim2; DLP"
                     /note="major polyA site"
ORIGIN      
        1 aagtggaaag gaactaaaat aatcttgtcg gattaccgga ctattgactg gggcgcgcgg
       61 tggcacgttc gttttctgcg tccgtgtttc tcacttccgt ttgggaggat tttttttttt
      121 tttttttttt ttttttcctg tcggaggaag cgtttctaag gatacagccc aggacccacg
      181 cacttcatct cagcagcctt tagacactgc agaattgata gtgcggacta gcattggact
      241 ttttcaagat gagcttcctc ttgcccaaac tgaccagcaa gaaagaagta gaccaggcga
      301 tcaaaagcac tgcggagaag gtgttggttc tcaggtttgg gagggacgag gaccccgtct
      361 gtctgcagct ggatgatatt ctctcaaaaa cttcagccga cctgagtaaa atggctgcta
      421 tttacctggt ggacgtggac cacacgccgg tttacacaca gtattttgac atcagttaca
      481 ttccctctac cgtatttttc ttcaatgggc agcacatgaa ggtggattat gggtctccgg
      541 atcacactaa attcgtagga agcttcaaaa ccaaacaaga cttcatagat ttgattgaag
      601 tcatctaccg gggagcgatg aggggaaaac ttattgtcca gagtcctatt gatcccaaga
      661 acgtgcccaa atatgacctc ctctatcaag acatttaaca cactgctgtt ggagctgaga
      721 gaagcacagg ttgagacggg gcctgaagcc agagggcctg tggtctggag tccttcagag
      781 acatgttcac tgcctgagca aagaggtttg cggtgtctgt aatcagcagc ccttttgcag
      841 cagccccagt gctccaagaa tcaggatgcc tgagcgtccc ttccctgaga gcctcacagc
      901 agtgaggcag gagcccaagt ggtgcctgtt cgtgacttcc gtttatcttg actttgcttt
      961 acccctcaag gtcaggcgtc ctcctagacg ctgtgagaac agcttgctct gccatgtttg
     1021 tgcacacgtt ctcccccatg cctccgttct cttgcccctt ctgccccctc ctaccccagc
     1081 ttatcttgaa ctaactaata attagatgca ggtgagttca tggtttcctc gcagtctgaa
     1141 agcagtaccc tgtccacgtg tttatagcca tccggccatt gattgccagg agaaaagtgt
     1201 ggctcttcac catccagcac ggcttgagct taaacaacaa gtttgggaag taagggacag
     1261 agctccccag aaagcactgc caccacccat tacctcaagg actaaagacc aaaaggatat
     1321 caggttgtta agggagaaac gccttgaggg gtttgcgatt ccatccaagg gcttttgaag
     1381 aatgtgaccc aacctcagga aacttgtgtt tctcctaagc cttatgggag tggttgtccc
     1441 tgtcgctctg gaatgagagc aggtacagag ctggagggcc gtggccaggc cgcttgtggc
     1501 ctgctgggca gcaagggcct tgttgccagc agaggcccag gtgtgcagga ggcagggcca
     1561 accctggcat cagctgctta tttctaagct tgtcctttag gggaaagtga aaccacgacc
     1621 tgaatctggc agacggggcg cagaaagaag atggtttggg ttttccgtgt cctctgccca
     1681 aagctgagag ctgcttcagg gatgggcaga gaaccttttc ccaccacctc cttaggatgc
     1741 acggggctat ggcagccacc ctggacacgt ggatgaaaac ttcgagattc taagagtcag
     1801 atccctaatg ctactgaagt cctaggtgaa caataaatgt tcctccacat ccctatggtg
     1861 gaataaaagg tctttgtcca actcactgtc
//
