LOCUS       XM_036164225            2771 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus tocopherol (alpha) transfer protein (Ttpa),
            transcript variant X1, mRNA.
ACCESSION   XM_036164225
VERSION     XM_036164225.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..2771
                     /gene="Ttpa"
                     /gene_synonym="alpha-TTP"
                     /note="tocopherol (alpha) transfer protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 3 ESTs, 268 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:50500"
                     /db_xref="MGI:MGI:1354168"
     CDS             4..747
                     /gene="Ttpa"
                     /gene_synonym="alpha-TTP"
                     /codon_start=1
                     /product="alpha-tocopherol transfer protein isoform X1"
                     /protein_id="XP_036020118.1"
                     /db_xref="GeneID:50500"
                     /db_xref="MGI:MGI:1354168"
                     /translation="MPRSGKHFPGEKQGGGGDCQRFNTSDFPSLGLAAVTLLMKNYYK
                     WRAECPELSADLRPRSILGLLKAGYHGVLRSRDSTGSRVLIYRIAYWDPKVFTAYDVF
                     RVSLITSELIVQEVETQRNGVKAIFDLEGWQVSHAFQITPSVAKKIAAVLTDSFPLKV
                     RGIHLINEPVIFHAVFSMIKPFLTEKIKDRIHLHGNNYKSSMLQHFPDILPREYGGKE
                     FSMEDICQEWTNFIMKSEDYLSSISETIQ"
ORIGIN      
        1 cagatgccaa gatctggaaa gcattttcct ggagagaagc aaggaggagg aggagactgc
       61 caaaggttca acactagtga ctttccttcc ctgggactgg ctgcggttac cctgttaatg
      121 aaaaactatt ataaatggcg agcagaatgc ccagaattaa gtgcagatct acgccctaga
      181 agtatccttg gacttctgaa agctggctac catggcgtgc tcaggtcccg ggattctact
      241 ggcagtagag ttctcattta cagaattgca tactgggacc caaaagtttt tacagcttat
      301 gatgtatttc gtgtaagtct gatcacatca gagctcattg tacaggaggt ggaaactcaa
      361 cgcaatggag ttaaagctat atttgacctg gaaggctggc aggtttctca tgctttccaa
      421 attaccccat ctgtagccaa gaagattgct gctgtactta cagattcctt tccactgaaa
      481 gttcgtggga tccatttgat aaatgagcca gtcattttcc atgctgtctt ctccatgatt
      541 aaaccatttc tgactgaaaa gattaaggac cggattcatc tgcacgggaa caactacaaa
      601 tcaagcatgc ttcagcactt cccagacatt cttcctcggg aatatggcgg taaagagttc
      661 tccatggagg atatttgtca ggagtggaca aattttataa tgaagtctga agattatctc
      721 agcagcattt ctgagaccat ccaatgagaa gttatttcct gcaaatgact tcatttaaaa
      781 ttcaaggatg ggatcctatc tggtttctaa actaaagggc aaaccttcta aactaattga
      841 tgcttatttg atcttaaaac atgcaacatg gatatttggg gaatgtttta acttctacaa
      901 tgctgctcct tttaaattaa ttaaatgtta ggaaagaaga tattcctgtt tgaacttgaa
      961 gagcaaacat agctacatgt aaagcagctg ttccagtgtg tctctgtatg gttcaggaaa
     1021 ttttatctta aacaaaacgt tatgatcaca ctgtttaata ctagattgat ggctacctac
     1081 tggaaagaaa tactgtatgt atcaactgat ggtgaaacaa tatcgatgct cagataaggt
     1141 tggcgtcagc atataaatca gactgtcctg aatacaatct catctcagga cagttcatct
     1201 caggtaaatc ctactctagc aaatgcacaa tagaagcctg tgaatgtaag tctacacaca
     1261 cgataatgtt gtcatcagtg aaatcacaat agaagccctt gaatgtaagt ctgcacacac
     1321 actattgttg tcatcagtga aatcactatg tttgataaaa atgatctaaa acttaggaca
     1381 tttttctggg gacagttgag aggtttctca cactgttttg tattttcaaa taagaatata
     1441 agtatggctt ctgtttatag acagggaagt agaggaatat gtcttttaca ttgacattta
     1501 tacttgaaaa cttaacacaa ctacatcaat gaagggtgct tacattttaa accatcagca
     1561 attatactct agtatttttc aaatattcat aaaatgcttt cattttattc tgagataatc
     1621 tactattatt tcagaatatt ctgagtccca cgatttaatt taaacagtca gtagctggga
     1681 tgtgctgtct ctaacacagt gtggttcatt tctaagactt ccattcattg agaaagatgt
     1741 aatcttatcc catattcagc acagccttca acttctggca taatgtttat acttaatgtt
     1801 tataattaat tttattttaa actggaaaga acacaagtag agaacttatt gaatttgtgt
     1861 tcaagtagtt caatttctac attaattaca ctagagtaac tttgtacaag gatctttttc
     1921 attgcacaag ggtgtttttc tttataagaa aataagtcta atcagatgag ctgatactta
     1981 cgattctcag tacatatacc tctgacaaaa gtgaaaggag ggccagatgt tctttagaga
     2041 acgtgtttaa ttttcactta gcaactagac gctaccttta ctatttaatt ttactaaaaa
     2101 aatcttgcct ttttctttaa aaaagccttc gttactaaat tatgaaattg aaattgtata
     2161 cataagaata ataaaaatca gttaaagaaa tgaacagtaa caaaacacct ctggcttatc
     2221 aaccttttat gatagaagga aactcagatg tcactttatt tatagagagc tattaagtca
     2281 cgtgccatga ctctgtgaag gaatggcaca ttacaataaa ggctaatgtt ttgaatgtgt
     2341 atactagtaa agcaattaac agtaacctga atttaaatgt cagtcgatgg aagtacagcc
     2401 tatgacaggg ctttgaaaac gtttctacag tgaagcagtt ctacagagaa cactaatgag
     2461 caatgtgtaa actgtttgga aggtgctggt gaataactgg aactttccac atggcttcac
     2521 cacacttgtg ccagaaacat attctgaaag ttgagctcca taggtgctca ccgtgctgct
     2581 gaatttcaca ataatttgct ttactattgt taaaaataaa catctttcct cacaaaccat
     2641 ggtgtttata tttttctaaa atggaaagga agcattcttt tcagaaaaga gaaatgtttt
     2701 tttctttcag aaaaatgcag taaaaacata ttatccatta tccgaatgca gtaaaaacat
     2761 cttagccgtt a
//
