LOCUS       XM_036163313            7412 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus tubulin tyrosine ligase-like family, member
            7 (Ttll7), transcript variant X2, mRNA.
ACCESSION   XM_036163313
VERSION     XM_036163313.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7412
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..7412
                     /gene="Ttll7"
                     /gene_synonym="1110049N09Rik; 4921517B04Rik; C630030B20;
                     mTTLL7"
                     /note="tubulin tyrosine ligase-like family, member 7;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 mRNAs, 29 ESTs, 467 long SRA reads, and
                     95% coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:70892"
                     /db_xref="MGI:MGI:1918142"
     CDS             1208..3859
                     /gene="Ttll7"
                     /gene_synonym="1110049N09Rik; 4921517B04Rik; C630030B20;
                     mTTLL7"
                     /codon_start=1
                     /product="tubulin polyglutamylase TTLL7 isoform X2"
                     /protein_id="XP_036019206.1"
                     /db_xref="GeneID:70892"
                     /db_xref="MGI:MGI:1918142"
                     /translation="MPSLPQDGVIQGSSPVDLGTELPYQCTMKRKVRKKKKKGIITAN
                     VAGTKFEIVRLVIDEMGFMKTPDEDETSNLIWCDAAVQQEKITDLQNYQRINHFPGMG
                     EICRKDFLARNMTKMIKSRPMDYTFVPRTWIFPSEYTQFQNYVKELKKKRKQKTFIVK
                     PANGAMGHGISLIRNGDKVPSQDHLIVQEYIEKPFLMEGYKFDLRIYILVTSCDPLKI
                     FLYHDGLVRMGTEKYIPPNESNLTQLYMHLTNYSVNKHNERFERNETEDKGSKRSIKW
                     FTEFLQANQHDVTKFWSDISELVVKTLIVAEPHVLHAYRMCRPGQPPGSESVCFEVLG
                     FDILLDRKLKPWLLEINRAPSFGTDQKIDYDVKRGVLLNALKLLNIRTSDKRKNLAKQ
                     KAEAQRRLYGQNPVRRLSPGSSDWEQQRHQLERRKEELKERLLQVRKQVSQEEHENRH
                     MGNYRRIYPPEDKALLEKYEGLLAVAFQTFLSGRAASFQREMNNPLKKMREEDLLDLL
                     EQCEIDDEKLMGKTGRVRGPKPLCCMPECAEVTKKQKYYGSSDSSYDSSSSSSNSELD
                     ENEKELCQKRLDQVPYSLKHTSHCKIIQQSNSMRRSVSCPRSISAHLPSRGDVRPFSS
                     QQVIPLARPTSASRSHSLNRASSYARHLPHGSDTGSTNTLNESLRQLKTKEQEDDLTS
                     QTLFVLKDMRIRFPGKSDAESELLIEDIMDNWKHYKTKVASYWLIKLDSVKQRKVLDI
                     VKSSIRTVLPRIWRVPDAEELSLYRIFNRVFNRLLWSHGQGLWSCFCDSGSSWESIFS
                     KSPEVVTPLQLQCCQRLVELCKQCLLVVYKYTTETRGPISGIGPDWGNSSPQTRNLGS
                     PEGVQGTLSYYREMLEGICYQEVPNFL"
ORIGIN      
        1 cacgaactgt ggaagtcaaa gaaatttcat gcttatgaac tttccctatc ctgtgaggtt
       61 catctcatgt gagataacga ttatttccgg gttaccaaga cagtaatcat gaacagaaac
      121 tgactgaact catgaacaag aaagcacaac tattcttgaa tttcttctgg actttatcat
      181 agctctgtcc aaagtgtcta ccccttcaat ctacgttttc caacttccgt gttgagattt
      241 tgttagcggg ctctaagctc ctcagacatc ctgatgcaag ggcgctcact tgatcttact
      301 ttcaggttga cttttgatac tctattatta ttatctaaat atagctaaat agtaataaaa
      361 gaccagaaga gcccttttgc gagatcttag gcactcctgt gtgttaagct gacatgtgga
      421 cttgggacct ggtggtctgg gtcacaagat gaagaaggag gtggcccaga tagatgtcag
      481 gccagctccc ctagcatccc cttaggaggg gatggcaccc tggagcttgc gttgctaggt
      541 cctctgttaa aggcgttctg aacgctccct gagcgggacc aagaataaga cggggtgagg
      601 ggtgccctgg aaagcccagc tcattcttct gcatacctag atgagaagcc atgggtccag
      661 gaggtcctta gcgctcaggc ctagttgtgg gtagaggacc cttcttttcc ttggtttctt
      721 ctgcccgtct ccagccctct cgaggtcctg gtgcttgtac ctccatgcac gatgcgcacc
      781 cctgggcgca gtgggcaaat ggtctggccc atcggtagct accaccccct tgggcacgac
      841 agctgctcca gctgctcctg gtccggtcga gcttctaagc tctgaaccgc ggctgccccg
      901 ggggggtggg cgagctgagg tgatcccaag acgacacgcg gagtggaccg accggggagc
      961 cgccagccgc tggcggggag tgtgggccac caagagaccg gccactggat ccagccagag
     1021 aggtgcctca gctgtagcat cccagcccaa aacttgtgtc gtgaaatcca agactttgac
     1081 ccagataatg tgataggatc ttcctgtgac ttggggccat attctactta gatgaactcg
     1141 gaacttccag ctttcccgag cgcttggcac tacaggcagg cttcttgctt gcttggtata
     1201 cgttaccatg ccatctctgc ctcaagatgg ggttattcag ggatcatctc ctgtggatct
     1261 gggtacagaa ttaccttacc aatgcacaat gaaaaggaaa gtgagaaaaa agaagaagaa
     1321 gggaattatt acagctaatg ttgccggaac aaagtttgaa attgttcgtt tagtaataga
     1381 tgagatggga tttatgaaaa ctcctgatga agatgagaca agcaatctta tctggtgtga
     1441 tgctgctgtt cagcaggaga agattacaga cctgcagaac taccagagaa tcaaccattt
     1501 tccaggaatg ggagagatct gtaggaagga tttcttagca agaaatatga cgaaaatgat
     1561 caagtctcgg cctatggatt atacctttgt tccgagaacg tggattttcc cttctgaata
     1621 tactcagttc caaaactatg tgaaagaatt gaagaaaaaa cggaagcaga aaacttttat
     1681 agtaaaacca gctaatggtg caatgggtca tgggatttca ttgataagaa atggggataa
     1741 agtcccttct caggatcatt tgatagttca agaatacatt gagaaacctt tcctaatgga
     1801 aggctacaag tttgacttac ggatttatat tttggttaca tcctgtgatc cattaaagat
     1861 atttctctac catgatgggc ttgtgcgcat gggcactgag aagtacatcc caccaaacga
     1921 gtccaacttg acccagttat acatgcatct gaccaactac tcagtgaaca aacacaatga
     1981 acggtttgag cgcaatgaaa ctgaagacaa aggcagcaag cggtcaatca agtggtttac
     2041 ggaattccta caggccaatc aacatgatgt cactaagttc tggagtgata tttcagagtt
     2101 ggtggtaaag actctgattg tggcagaacc tcacgtcctg cacgcctacc ggatgtgcag
     2161 acccggtcag ccccccggga gcgaaagtgt ctgcttcgaa gtcctggggt tcgacatctt
     2221 gttggataga aagctcaagc catggcttct ggagattaat cgagccccaa gctttggaac
     2281 tgatcagaaa atcgattatg atgttaaaag gggggttctg ctaaacgcgc tgaagctgct
     2341 gaacatcagg accagcgata aaaggaaaaa cttggccaag caaaaagcgg aggctcagag
     2401 gaggctgtac ggtcaaaacc cagtaagaag gctttcgcca ggctcctccg actgggaaca
     2461 gcagaggcac cagctggaga ggcggaaaga agagttgaaa gagagactcc ttcaagtacg
     2521 aaagcaggtt tcgcaggaag aacatgaaaa ccgacatatg gggaattaca ggagaattta
     2581 tcctcctgaa gacaaagcac tgcttgagaa gtatgaaggt ttgctggccg tcgccttcca
     2641 gaccttcctc tcgggaagag cagcttcatt ccagcgagaa atgaacaatc ctctgaaaaa
     2701 gatgcgggag gaagatctcc tggatcttct ggagcagtgc gaaatcgatg atgaaaagct
     2761 gatggggaaa accggccggg tccgaggacc gaagcccctg tgctgcatgc cagagtgtgc
     2821 agaggtcacg aagaagcaga agtattacgg tagcagtgac agcagctacg acagcagcag
     2881 cagcagcagc aattcagagc tggatgagaa cgaaaaagag ctgtgtcaga agagactaga
     2941 ccaagtccca tatagcctta agcacaccag tcactgcaag ataatccagc aatccaattc
     3001 catgaggcgt tcggtcagct gccctcggtc catctctgct cacttacctt ccagagggga
     3061 tgtgcgcccc ttttcttctc aacaagtgat accattagca agaccaacgt cagcgtcccg
     3121 gtcacattcc ttaaaccgcg cttcatccta cgcgagacac ctgcctcacg gcagtgacac
     3181 cggctctacc aacactctga acgagtcttt gcggcaattg aaaaccaaag agcaggaaga
     3241 cgacctcacc agtcagacct tgtttgtcct caaggacatg agaatccgct ttccggggaa
     3301 gtcagacgca gagtcggagc tcctgataga agatatcatg gataactgga agcattataa
     3361 aacaaaagtg gcttcatatt ggctcataaa attggactct gtaaaacaac ggaaagtttt
     3421 ggacatagta aaatcaagta ttcgtacagt tcttccaaga atctggaggg tccctgatgc
     3481 tgaagaactg agtttatacc ggattttcaa cagggtattt aatcgcctac tctggagtca
     3541 tggccaagga ctgtggagct gtttctgtga ttcaggatcc tcttgggaga gcatcttcag
     3601 taagagccct gaggtggtga cccctctgca gctccagtgc tgccagcgcc tggtggagct
     3661 ttgcaagcag tgcctgctgg tggtttacaa atacacaaca gaaacaagag gacccatctc
     3721 aggcatcggt cctgactggg ggaactccag tcctcaaacc aggaatctgg gttcacctga
     3781 aggagttcag gggactttgt cctactacag ggagatgctg gaaggtattt gctaccagga
     3841 agtacccaat ttcttatgag atcaccactg tacaacatga aatataattc acccggaatg
     3901 actcgctcca atgttttgtt tacgtcccgc tatggccgtt tgtgaatgga agattgccat
     3961 gggctcgctt aatagcaatt catttatttt ctccagttga accttaagga agtgaccctt
     4021 atatgctgtt ttatgtatat atgtcataga agtgtgtgaa gtacatacac acaggcactc
     4081 aagtaacata taaatatata tatttattat atgtaagaag aattagcaga aaactgaata
     4141 taagatttaa cctttctgga aatgtaataa accatgttaa agttgtttac acaaatacgc
     4201 aaatgtgtag aatttgctag gtttataatt aattacttcc tactagaaat gttatttttg
     4261 ctgcagagtc gatcctgaag ctcccatcat ggcgttataa attattttct agataatagg
     4321 gctttcgact tgagaaaaca ctgatagtat cttattacct ttctcactat tagtagttat
     4381 ttaacagtga aacagaagac ttagatgcct ggggttggct tgatgatcag attaggatca
     4441 aacagatttg ttgttactat agcacactgt aaagtactag aaaatagccc agcctgactc
     4501 tccaacattt tactccccta ggtgggaatt tagctgctta ttctagtgca catgttcaat
     4561 aaaggtctgg taagatcatg aatcatgcaa aaatgagagg caacccagtg gattaagagt
     4621 aaaatgcaaa catgctttaa ttcgactctt catggggagt cccatagaga agcaagacga
     4681 tggcagggac agaaatttgg ttgtgtgact tctgtgtcac tttcttttgg aaagtatatc
     4741 attgatgggc ccaagtctct caacattgag accaatttac ctcgcaaagt ccaataagag
     4801 tagtttctca tttcacccca gaaaagactc cgaagagaag agtccagtga gtcccattgc
     4861 tcatcggtgt catctgttgg gagtctatat tcaaagttct gtataaagtt gtcttcctgt
     4921 ccagaggatt catgcttgtt tttcagacca tcatgctctc attctgcttc atcttccttg
     4981 ccatctgaaa accagtgtgt gctctcggtt ttccatacaa atagagacat atgccctatg
     5041 gattcttgaa ctcagaaaat acaatatttg ctgaaacttc cctccagtga ttttactcat
     5101 acatgttaag tttctgcaaa actcagaata tttgccagct tcttatattt ttacgtttgt
     5161 tccccataaa tgaagaaagg accccaaagc agtaagaggt catttggcct ggtctcattc
     5221 gaagctggat ggatggtgac ccgaaattgt aagatttaag tattttgctt taaaaactac
     5281 cttgggagag tatactttta aactgtaata ttcatttatc acacacatta ccggcagcta
     5341 cttaagttct ttatggctgc ctacccacat gcattccagt agagactttt ttttactggc
     5401 aacatcccat ggaattttgt gttatgtttt tgaaagagaa taaagcctcc agatcaagca
     5461 gatgagtgag tgtggtactt aggagtccat attgtggatt cttcaacatg gcagagagtt
     5521 cttagaatca ctgatgcaaa tactggaaca cttcaggatt tttatggaaa taataaacaa
     5581 agcagcccct tttggggttt atttgtagcc atatttgttt tcaattcatg atttaaaaat
     5641 caaggaggaa taaaagaaga aacacaaaag tcatggatat gtcacttaaa atgactgata
     5701 agtgatacca acccagtttg ttggccattc actttgtctt aaatcacaaa tgatcattta
     5761 ctcagataga gtatatactc tgaaacttct gtcacatact aggaaggaat tttcatttta
     5821 aaaaaggcga ggggagatgt ccacattagg aattctcacc ctagaaacac acattaaaag
     5881 ctaagagtaa atggaaatag aaagactgcc aagcatttgt gaaaggccat tatttcctta
     5941 tctatccaag caaggccttg ttttgagcac tggaatttca ttgcctacat tttcctgttg
     6001 ggacaagttg ggtagggtga agtggtgcag gaagctgtgt gctcattatt tatgtgcatt
     6061 acctggggtg ctgtggactg tggttgtcat agcaccatcc cctaatgagc agccacggga
     6121 agacatgata atgaaccgtg gaagtctcag gaggccacag acaggtagta ggggtataga
     6181 atattcctta gcttttatca atttcttatg cttatgctta aaacacatct gcagcagaga
     6241 cagtgtaaat ctttaataga agagaaggaa aattccagaa gctagttaat ttcaccaggg
     6301 tgtttgtttg tttgtttgtt tgtttgtttg tttgtttttc cttagaatgg attttggttt
     6361 acctacaagg aaaggaatga gtatagacct gcagtataga tggctgtttg gttcatggcc
     6421 aggtagaaat gcttccccaa actaagatac agatgtcacc ccaattgtct aagtagtaac
     6481 ttgcttgtta gtttgtcctc acccacaaac agaatctaaa ggaacagttt agttttcact
     6541 cgagtaagcc agccttgaag gtttgaatct ggtaaaagac cctgttgcaa tatgagtatt
     6601 aagttgtata tggagcacag gggaagcaac tccgttgtct gtaaaatgcc agggtttgcc
     6661 tagattagat gaagtttttg ttacttgtct ctaaagttca aaccaaacca aaaccaaagc
     6721 cctttctttc acctgctatt tatgcataca tagagaacaa gtgcctccca gacatcagga
     6781 aaatgatttt cttcaaattc tctcgttagc ttggatagta gatgagactg ggatcatgcg
     6841 atgtgaaatt gtagatatct gaataggaat tcaatgcttt cttccttaac atgtcaatga
     6901 tattctgtgt aaacattatc ttcaatatgc aatacacact attcaaaaat accaaaaatg
     6961 atagctgcat acatgccatt acttaatctt ctataaagca cttattcatt cttaaatata
     7021 tattctttta aaaatagtaa gtacctcaaa agtgacagaa aattccttcc ttctctattt
     7081 agcaattgct agtttacatt ccgaatctca tgtacttggt tctaagcatt aaacaacaat
     7141 aaaaatataa ctatacaatt atcgttcttg tgacctggtg atttttggac atttactttt
     7201 ctctttaaat tgagagcttt aagtgtaaag ggccatgata tctacatatt aattattaga
     7261 tatctaattg ttttgaacaa tttcaatgtt ggcttataag taaatgaaga ctgtagaaat
     7321 atatttgtaa agcaaatgat tcctcacatt gctttctctc tctcctgttc tcctttcaat
     7381 tcacttagaa gctttagttg tgcatggaca aa
//
