LOCUS       NM_029321               1000 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus tetratricopeptide repeat domain 32 (Ttc32), mRNA.
ACCESSION   NM_029321 XM_126808
VERSION     NM_029321.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC110376.4 and
            AC132572.3.
            
            On Nov 17, 2006 this sequence version replaced NM_029321.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK078146.1, BC119273.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-200               AC110376.4         185368-185567
            201-367             AC110376.4         190293-190459
            368-1000            AC132572.3         96919-97551         c
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 3.98 cM"
     gene            1..1000
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
                     /note="tetratricopeptide repeat domain 32"
                     /db_xref="GeneID:75516"
                     /db_xref="MGI:MGI:1922766"
     exon            1..200
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             61..507
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
                     /note="TPR repeat protein 32"
                     /codon_start=1
                     /product="tetratricopeptide repeat protein 32"
                     /protein_id="NP_083597.1"
                     /db_xref="CCDS:CCDS25808.1"
                     /db_xref="GeneID:75516"
                     /db_xref="MGI:MGI:1922766"
                     /translation="MALRPGREGGESSAALATAQARFSRGEFAEARELYSAFIGQCAR
                     HGSKCSPEDLATAYNNRGQTKYFSVDFYEAMDDYTSAIEILPSFEVPYYNRGLIRYRL
                     GYFDEALEDFKKALDLNPGFQDAVLSLKQTILDKEEKQRRNAEKSY"
     exon            201..367
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            368..1000
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      766..771
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      791
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
                     /note="major polyA site"
     regulatory      860..865
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
                     /note="hexamer: CATAAA"
     polyA_site      886
                     /gene="Ttc32"
                     /gene_synonym="1700013G20Rik"
ORIGIN      
        1 tagccaacga agtcccgtga gcggtagctg tggttccgct tccacccggg tgaggcggtc
       61 atggccttgc ggccaggccg agagggcgga gagagctcgg ccgccctggc cacggcgcag
      121 gctcgcttct ccaggggcga gtttgccgag gcccgggagc tgtactccgc cttcattggc
      181 cagtgcgcgc gtcacgggag caaatgtagc cctgaggatt tggccactgc atataacaac
      241 agggggcaaa ccaagtactt cagcgttgat ttttatgaag ccatggacga ctacacatct
      301 gccatagaaa tcctgcccag ctttgaagtt ccctattata acagaggcct gatacgctac
      361 aggctggggt attttgacga agctttggaa gatttcaaga aggcactaga cctcaatcct
      421 ggatttcaag atgctgtttt gagcttaaaa cagaccattt tagacaaaga agaaaagcaa
      481 agacgaaatg ccgagaaaag ttactgaaac ctttagctta ttgagatttt aactcaagat
      541 ccttaaatct gcatttgatt ggctctaaga tgggcataga gctattttga ttatatgtaa
      601 gagactgaat tttagaagtg aaagtaaaat aatgtactta ttaattttaa gaaagatcat
      661 gtttgataga tctcttaata gagtaaataa atgataccag tgtataaatg tatgctatta
      721 cagcaaaata tttaaatcaa tatgtactaa atatgtacta tttttagtaa aggttttatt
      781 tttaccacat atttctattc ccaactttgt attttttttt tcccgcctat aggaaagttg
      841 ttggtaaata cagtcaagtc ataaactctt cacctactta aaataacaca tttgcttttt
      901 ctgaatactt aaaaccaaaa ctttccactc taaagtctga ggcaggagga ttgctgtgag
      961 tacgctaagc ctaaactata gagaccctta aacaaaaccc
//
