LOCUS       NM_173033               3726 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus thiosulfate sulfurtransferase (rhodanese)-like domain
            containing 2 (Tstd2), transcript variant 1, mRNA.
ACCESSION   NM_173033
VERSION     NM_173033.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3726)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   2  (bases 1 to 3726)
  AUTHORS   Nishimura,M., Yokoi,N., Miki,T., Horikawa,Y., Yoshioka,H.,
            Takeda,J., Ohara,O. and Seino,S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
REFERENCE   3  (bases 1 to 3726)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   4  (bases 1 to 3726)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
REFERENCE   5  (bases 1 to 3726)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY013797.1, AK028258.1, CD549731.1 and AL732615.15.
            
            On Apr 11, 2007 this sequence version replaced NM_173033.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK155456.1, SRR9219382.239222.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-106               BY013797.1         1-106
            107-963             AK028258.1         50-906
            964-1141            CD549731.1         369-546
            1142-2740           AK028258.1         1085-2683
            2741-3726           AL732615.15        147201-148186       c
FEATURES             Location/Qualifiers
     source          1..3726
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 24.49 cM"
     gene            1..3726
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /note="thiosulfate sulfurtransferase (rhodanese)-like
                     domain containing 2"
                     /db_xref="GeneID:272027"
                     /db_xref="MGI:MGI:3039624"
     exon            1..96
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            97..304
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            305..618
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            619..739
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            740..865
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            866..971
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1090
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            1091..1249
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            1250..1388
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     exon            1389..3726
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3697..3702
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /note="hexamer: AATAAA"
     polyA_site      3726
                     /gene="Tstd2"
                     /gene_synonym="3010020C06"
                     /note="major polyA site"
ORIGIN      
        1 tctctgcgca cgcgcgcgcc ggggggcgtg ggctcgaggg cggggagcag cgccaagttg
       61 gtgaagggag acccaggaaa ggcctagggt ttgcggaaga tacttgtctg caaggaacct
      121 gtcccactga taaagccaga tgccttcttc cacttcacca gacgaagagg atggcctgga
      181 gacctgtgtt ttaaaggttt ttgatctgga tttaaaagaa tcaaatcttg ttaatcccag
      241 caacagtctc aaagcagagt tagatggcag cacaaagaaa aaatactcgt ttgcaaagaa
      301 aaaggccttt gcccttttgg tcaaaaccaa acaagttcca gcaccctctt atgaatttaa
      361 gggaaaacgg tggcgatgtt gtcagcagct gtttgcagac cagatcagca tccacagaca
      421 tgtggccaca cagcatgctg aagacgtgta ccagcagact gcgtctcttc tgaagcagct
      481 gactgcagca ttgagtgcct cacagagcct tacgcccaca gacaaaagga gctcccccaa
      541 agactgtctc actcctagtc aggaggtgtc tgcttggctt cctgatgtga gccatgttag
      601 cccccaggag ctgaggagtg gccagggtga cgaggaagga gaggtgctcc tgtattactg
      661 ctactgtgac ttggaggacc cccattgggt ctgtgcctgg cagacagctc tgtgccatca
      721 cctgcacctt acaggcaaga ttcggattgc tactgaagga atcaatggaa ctgttggcgg
      781 aagcaaagtg gccaccagac tctacgtgga agtcatgctt tcctgcccat tatttaagga
      841 ttacctgagc gaggatgatt ttaagagcag caaaggaggg tctcactgct tcccggaatt
      901 gcgagtcggt gtgtttgaag agatcgtgcc tatggggatc agccccagtc aggtctccta
      961 caagaagccc ggaatccatt tatcccctgg tgaatttcat aaagaaatag aaaagctttt
     1021 atcacagtca agtgaggaac aaggcaatac tatcatactg gactgcagga acttctatga
     1081 aagcaaaata ggacgattcc agggctgctt agcaccagac atcaggaaat tcagttactt
     1141 ccctagctac gttgacaaaa accttgacat tttcaggcag aagagggtgc tgatgtactg
     1201 cactgggggc attcgctgtg agcggggttc cgcatacctc agagccaagg gagtgtgtaa
     1261 ggaagtgttt cagctcaagg gtggcatcca caagtacttg gaagagtttc ctgatggctt
     1321 ttacaaaggg aagctgtttg tgtttgatga gcggtttgcc ctggcctaca acagttctgt
     1381 ggtatcagaa tgttcatact gcggagcccc atgggaccaa tacaaactct gctctactcc
     1441 ccaatgccgc cagcttgtgt tgacctgttc tgcctgtcaa ggacaaggat tcacagcctg
     1501 ttgtgtcacg tgtcaagaca aagggggcaa gcaggcttca ggcccctccc aggacagttt
     1561 taaagaagaa tgtgagtgta ctgcccggag gccacgaatc ccacaggaac agcaggcaca
     1621 gtcatgagtt cagtccctgt gagcctggac ctgggcctgg tgttccgcat tcactgacac
     1681 atgcagactt aagttgccat gtgcagcttg agacggtata gagacaaatg gagagcatcc
     1741 atgttggtca ctgccagcac agcagatggc cacagggaca agggacaggg agtcagtgtc
     1801 agctgcctga tttgccattt gatccagagg atgctacagc ctggaacaaa ggcaaaccct
     1861 gaggaatccc aacgatgttg agggattatc ttgagcttgg cggcttctct gccatgctgc
     1921 agggtggtag gcattgctct tcagcaaacc tttttaccct gacagcaaaa ttataaaagt
     1981 tgggccctgg gtgtagactc ttaaaccagg ccagctcttc cctaactgcc tgaggctctg
     2041 tggctctgat caccttgtgc cttgaagcat ttactaaatt tgcaaaccca tttttctata
     2101 tgtgatcatg gcactactga gtagttggcc agagaccatg cggcttcaga atctaaagta
     2161 tattctgtcc cttcacagag gtcctctgaa agaggtggcc catgcttttg ttgatgtggt
     2221 ttctttaaag atgttcctct agcagctttg cattacccag catccctctc tcagcttgca
     2281 agtgttctca gggatctaga cgagcagcag gcttaggtca gcatctgcca cacagacact
     2341 tggtcggtga gctcactcag catggtagct gcctagcctc ctggcctttg ggcacatatt
     2401 cttatcccac gattcttaag aagcacacag agccacacat agaccaaatg gctttaatat
     2461 tattttgcag tttccagtga tgcagaatgc agctgcagtt gtgtttcaag gagaagctga
     2521 gtggggctgg ctgtccctgc agcttggtgc cactcctggg cccgtgtgca gcctcagtgg
     2581 acactcagtg ctgaggcccc gatgccacct ctagttaccc tgtactgtcc atactgttac
     2641 agttcggtgt gcaggctttc tcttaagtca gaagccccct ggctatgctc aacagctttt
     2701 gagccttatc attactataa tattggctga atccctaagg aaaataactc cccaaaacaa
     2761 caaaaatact agtttaactg gcactgtggt ctattaaaag gcacaagaac agtgtatttg
     2821 aacattttta ctggctccca tggtgttaaa aaaggaaatc cagtaggaac accaagatta
     2881 ggtttcagag taatcccgtg tgttgtttgg ccaggatctc ctaattcctt accattaaga
     2941 tgctgtactc tgctgtcctc tagaggcttt gtttgtaggc aagagctctg tgtgatttga
     3001 tttgtctcat aaatgaccag gcaggcactt ggtgtctgta agcagggcca tgctaaatac
     3061 cacaggcatg gtggactgga aattcaccca atggtgttga tctcacataa gccattgccc
     3121 actgtggtat aggaagatgt ttttatgtgg ctgtaagttt tctttttttt tccttttttt
     3181 tttttttttg gtttttcgag acagggtttc tctgtatagc cctggctgtc ctggaactca
     3241 ctctgtagac caggctggcc tcgaactcag aaatccgcct gcctctgcct cccaagtgct
     3301 gggattaaag gcgtgtgcca ccactgccca gcggctgtaa gttttcatcc atcatgaagt
     3361 tggaattcaa taaagaagaa atgatttctg actgcagatg agtaccccgc aggtgttccc
     3421 acagcactca gaaggatgtc tgttgcctgg tgtggtgggt tttgaaactt gaaaattcac
     3481 cattgccttt ttctccctct ttatcttacc tggcaaaagg aatcctgtgt ctttctgact
     3541 cttagaaaat tctgtggctt gtctttcatt cttaggggtg ggggtttgat cctggaatca
     3601 atttggcagc tttaatcttg atgtcaaagt ttcaagtggg ggttgacaga tcatgattat
     3661 gtgttctttt tactgagttg ctacgatcaa attggaaata aaagattgtt tcaccacgct
     3721 tccaaa
//
