LOCUS       XM_036160761            1191 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TSR3 20S rRNA accumulation (Tsr3),
            transcript variant X3, mRNA.
ACCESSION   XM_036160761
VERSION     XM_036160761.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..1191
                     /gene="Tsr3"
                     /gene_synonym="0610007P22Rik; 1110014B11Rik"
                     /note="TSR3 20S rRNA accumulation; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 289 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     30 samples with support for all annotated introns"
                     /db_xref="GeneID:68327"
                     /db_xref="MGI:MGI:1915577"
     CDS             332..1147
                     /gene="Tsr3"
                     /gene_synonym="0610007P22Rik; 1110014B11Rik"
                     /codon_start=1
                     /product="18S rRNA aminocarboxypropyltransferase isoform
                     X3"
                     /protein_id="XP_036016654.1"
                     /db_xref="GeneID:68327"
                     /db_xref="MGI:MGI:1915577"
                     /translation="MCLIWGPRTYPTLSDRQLVAQSGVAVIDCSWAKLDDTPFQKMRG
                     SHLRLLPYLVAANPVNYGRPCKLSCVEAFAAAFCIVGFSDLAVILLRKFKWGKGFLDL
                     NRELLDKYAACRGPEEVLQAEQGYLASTRDTPEEDIDPFDVDSGREFVNLNRPVASTR
                     AVAVLWSISLPGYLRTWMTLMGLRSTVKILRRTVMSVRNQDLVLMEETATTLELKRPQ
                     NKRLKPETPLKFGKGSRNDRETEGHKHIIEAGVHYSEVAVGPGDGRACWDNLV"
ORIGIN      
        1 ctcgcggatc caggaaagag agcggtcgtg ttcggcgacc ctctggccgc tctctggatg
       61 ctttcgctga agaggtgggc gctgcgctgc gtgcatccgt gcagcccgag gaggccgagg
      121 accagggcgg cccgggccct gcggcgctgc cttgtgcctt ggctatgtgg gagcttggtc
      181 actgcgaccc caagcgctgc acgggccgca aactggcccg tctgggtctg gtgcgctgcc
      241 tgcgcctgag ccaaaggttt ggcggtctgg tgctcagccc agtaggcact gagtacgtgt
      301 ctccggcaga cagtgaagcc agtctccaag gatgtgcctt atttggggcc ctagaaccta
      361 ccctacactc tctgacagac agctggtggc acagtcaggg gtcgcagtca tagactgctc
      421 ctgggccaaa ctggacgaca caccctttca gaagatgcga gggagccact tgcggctcct
      481 gccttacctc gtagctgcca accctgtaaa ctatggccgg ccctgcaaac tttcctgtgt
      541 ggaagctttc gctgctgcct tctgcatcgt aggcttttca gaccttgctg tcattttgct
      601 tcggaagttt aagtggggca agggcttcct ggacctgaac cgggagctcc tggataagta
      661 cgcagcttgc cgtggcccgg aggaggtgtt gcaggctgaa caggggtact tggctagcac
      721 cagggacacg cctgaagagg acatcgatcc ctttgacgtg gactcagggc gggagtttgt
      781 gaatctcaac aggcccgtgg ccagcacccg ggctgtggct gtactgtggt ccatctcact
      841 cccaggctac ctgaggacat ggatgacact gatgggtctg aggagcacag tgaagattct
      901 gaggaggaca gtgatgagtg tgaggaacca ggacctggtg ctaatggagg agacagcaac
      961 tactctggag ctgaagagac cccagaacaa gaggctcaag ccagagactc cactgaaatt
     1021 tggaaaggga tcaagaaacg acagagagac tgaaggtcac aaacatatta ttgaagctgg
     1081 tgtgcattat tcagaagtgg cagtaggacc tggggatgga cgggcctgct gggacaacct
     1141 tgtttagtgt cctgccttag tgctctcaat aaaaccaagg agaccccgct a
//
