LOCUS       NM_030203               3916 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus TSPY-like 4 (Tspyl4), mRNA.
ACCESSION   NM_030203 NM_133745 XM_622098
VERSION     NM_030203.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3916)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3916)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3916)
  AUTHORS   Schilling,K. and Oberdick,J.
  TITLE     The treasury of the commons: making use of public gene expression
            resources to better characterize the molecular diversity of
            inhibitory interneurons in the cerebellar cortex
  JOURNAL   Cerebellum 8 (4), 477-489 (2009)
   PUBMED   19554387
REFERENCE   4  (bases 1 to 3916)
  AUTHORS   Peters,L.L., Weier,H.U., Walensky,L.D., Snyder,S.H., Parra,M.,
            Mohandas,N. and Conboy,J.G.
  TITLE     Four paralogous protein 4.1 genes map to distinct chromosomes in
            mouse and human
  JOURNAL   Genomics 54 (2), 348-350 (1998)
   PUBMED   9828140
REFERENCE   5  (bases 1 to 3916)
  AUTHORS   Brady,K.P., Rowe,L.B., Her,H., Stevens,T.J., Eppig,J.,
            Sussman,D.J., Sikela,J. and Beier,D.R.
  TITLE     Genetic mapping of 262 loci derived from expressed sequences in a
            murine interspecific cross using single-strand conformational
            polymorphism analysis
  JOURNAL   Genome Res 7 (11), 1085-1093 (1997)
   PUBMED   9371744
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY248195.1, BC017540.1 and BC034656.1.
            
            On Sep 1, 2006 this sequence version replaced NM_030203.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                BY248195.1         2-52
            52-2699             BC017540.1         1-2648
            2700-3916           BC034656.1         2648-3864
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 18.85 cM"
     gene            1..3916
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
                     /note="TSPY-like 4"
                     /db_xref="GeneID:72480"
                     /db_xref="MGI:MGI:106393"
     exon            1..3900
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..1314
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
                     /note="TSPY-like protein 4"
                     /codon_start=1
                     /product="testis-specific Y-encoded-like protein 4"
                     /protein_id="NP_084479.1"
                     /db_xref="CCDS:CCDS23778.1"
                     /db_xref="GeneID:72480"
                     /db_xref="MGI:MGI:106393"
                     /translation="MNGVEGNNELSLANTTTPSHASEDLDLKQDQGLQEETDTVREME
                     AAGEAGADGGASPDSEHCGPELCFRVAENSCAAAARGLEDAPSPSKGGDAPSAPVAAD
                     DSSKNGCQLEGPHSPAKPKALEACGAVGLGSQQMPGPKKTKEMTTTKCAISVATGKEG
                     EAGAAMQEKKGLQKEKKVAGGGKEETRPRAPKINCMDSLEAIDQELSNVNAQADRAFL
                     QLERKFGRMRRLHMQRRSFIIQNIPGFWVTAFRNHPQLSPMISGQDEDMMRYMINLEV
                     EELKQPRVGCKFKFIFQSNPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQEPQAHI
                     HRNREGNTIPSFFNWFSDHSLLEFDRIAEIIKGELWSNPLQYYLMGDGPRRGVRVPPR
                     QPVESPRSFRFQSG"
     regulatory      3848..3853
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
                     /note="hexamer: AATAAT"
     polyA_site      3849
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
                     /note="major polyA site"
     regulatory      3863..3868
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
                     /note="hexamer: AATAAA"
     polyA_site      3864
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
     regulatory      3867..3872
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
                     /note="hexamer: AACAAA"
     regulatory      3879..3884
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
                     /note="hexamer: AATAAA"
     polyA_site      3880
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
     polyA_site      3884
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
     polyA_site      3900
                     /gene="Tspyl4"
                     /gene_synonym="2610102M01Rik; B230210I21Rik; D10Bwg0791e"
ORIGIN      
        1 agaaggaaaa ggggtggagc taagcactca ctgcggtttt gcgctgcgtc tgcagaggac
       61 aaggaaagct ctgcagggct gtcagctgcc aaaatgaacg gcgtggaagg gaacaacgag
      121 ctatctctcg ctaacaccac gaccccctcc catgcctccg aagatctgga tctgaagcag
      181 gaccaggggc tccaagagga aaccgacaca gtgcgggaga tggaggctgc aggtgaggcc
      241 ggtgcggatg gaggcgcgtc tccggattcc gagcactgcg gccccgagct ctgcttccga
      301 gtggctgaga atagttgtgc tgcggcagcg agaggtctgg aggatgctcc gtctccatca
      361 aagggcgggg acgcaccctc agcccctgtg gcagccgacg acagcagtaa aaatggctgt
      421 cagcttgaag ggcctcacag ccctgctaaa ccgaaagccc tggaagcctg tggtgcggtg
      481 ggcctggggt ctcagcagat gccggggccg aagaagacca aggaaatgac gactaccaag
      541 tgcgccatct ctgtggccac cggcaaggag ggagaagcag gagcggcaat gcaggaaaag
      601 aaggggttac agaaggaaaa aaaggtagct ggaggaggga aagaggagac tcgacccaga
      661 gctccgaaga tcaattgcat ggactcgctg gaggccatcg atcaagagct gtcaaatgta
      721 aatgcgcagg ctgacagggc cttcctccag ctggaacgca aatttgggcg gatgagaagg
      781 ctccacatgc agcgcagaag tttcatcatc caaaacatcc caggtttctg ggtcaccgct
      841 tttcggaacc acccccagct gtcaccaatg attagtggcc aagatgaaga catgatgagg
      901 tacatgatca atttagaggt ggaggagctt aagcagccaa gagtagggtg caaatttaag
      961 ttcatctttc aaagcaaccc ctactttcga aatgaggggc tggtcaaaga atatgagcgc
     1021 agatcctcag gtcgagtggt gtcactctct acgccaatcc gctggcaccg gggtcaggaa
     1081 ccccaggccc acatccacag gaatagggag gggaacacga ttcccagttt cttcaactgg
     1141 ttctcagacc acagcctcct agaattcgac agaatagctg aaattatcaa aggggagctg
     1201 tggtccaatc ccctacaata ctatctgatg ggcgatgggc cacgccgtgg agttcgagtc
     1261 ccaccaaggc agccagtgga gagtcccagg tccttcaggt tccagtctgg ctaagctctg
     1321 ccctcgtgag aagctcttgc agaggagtcc ttaccacctc ctcagcttgg ccagcagcat
     1381 gcagccttct gtctgctttc tcttcctgtt ggattgtgtt cattggttct tctaagtctc
     1441 cagtagtttc aagattgtgg ctttcaagtc tttgctcttc tttctctggg ccatcacgat
     1501 gttctgcata tatatatata atggtgttcc aagtgcatgg ccttcaaact gcttctatgc
     1561 caagtcacgt gctgtagtct gtacttcgtt ctttgcatgg cttggtccct gtctgtgaca
     1621 tgatcttttt ttcatttttt tttttaagtg gttctctgcc acaagaaagc ttgacacatt
     1681 cttaccaaga actagccagg cttcatactt tctgctgtgt tcccgatatc tatgtactgt
     1741 gaagaaccgt gagtttcacc actgcaagat ggaactgtac cccaacccag ccattagccc
     1801 aacaggacat tccaggctat tgccaactga tcctagctgt cttcctgggc ctttgccttt
     1861 taccctgctt gttatctcta caacaagcag gtggctggtg ggtatgagtg aagtaacagg
     1921 cgaggaatgt tttctgtcac ctcattggtc ttgtaccgtt ggttgctgtg cattgtgatc
     1981 agctactggt gagtatggaa gcttgtgcaa ttgcccacta gttctctcct ggttgagctt
     2041 tgcacaggcc caagtggttc ctcaggaact atctaaggac ctaagttcct aggcagcaca
     2101 cagatacccc ctgctgtacc agttcccatg gctcaattag ctgctgggca ggatctgtag
     2161 tctcacgtgg cagtgcccaa agcaaagctg aagtggctcc cttccagtgg ttagttctga
     2221 gccctaacca acaaattatt ccttatccag gcacctttga taggtaacta ctcctcttcc
     2281 tgtgttcaca cccactctgg ttaagtcaaa gttgcctagg tttgggtagt tagaaattgt
     2341 ttgtggccca caggccttgc tatacctttt tctctttggc tcttctcttt tcacctcccc
     2401 ccaacccctt ttctttttaa ggcagttaca gcccagagac agaaaaaaca aaagacagca
     2461 ggctttttat ttgctctccc cttggttgta tgcaggctgg gaaaggtact gtaaagtaga
     2521 ctccaaatct ctcactgccc tgactattcc acccttctca tagcaaggga gaccacctcc
     2581 actcttccct ccattctact aggtgctgtg tctttaagct ctagtttggg aatctgagag
     2641 aagagaaaga agagtctcaa tgacagaccc tgtgcctgcc ctgagcagtc tgtgaatgaa
     2701 tgcacctagc ccacgtttct aaaggacagc agttcttttg tgggcctcag cctgtagaaa
     2761 tgaccagaga gcaacaatgt gcgacatctt tgttgtttgc ctgatcttgg cccttacctg
     2821 tcaggttttg aatgtccttc catgtttcca tcctaacaaa gaaggaagca ggctgtagag
     2881 tgcattgtgg gagggagacc ccaagcctct tctcagggat gtggggatgt gaggggtctg
     2941 gatttgcagg acatgctcca ttgaatttgc aacagcgctg ttgtggcttc tgccgctgca
     3001 gccctcaggc attccctttc tgattgaaag accttgttga aagcttctcc aaagctcgta
     3061 ggtctggata ccttcgttgg aggctgggaa ttttaagagg aggactagag ggaagagcct
     3121 gttgcagagt gagtttttct aggtctgctg agatgattga cacatggagg gagcagggtt
     3181 gggggcaggg gtccctgaag cacattccag tgcaaggagg tgggggaagg gatcaagtgg
     3241 gttgggattt aaaaagagac gcttggagga tattccttag tttgttctaa ttttcaactc
     3301 caccagtaga tgttagtaaa cagatgtaag tctgagtgag ccttgcctgg ggagatcaat
     3361 ggtgtgcact cctcattcca ctgcgctcga tcctagtccc ccctgtcagc tcactggcag
     3421 gattgatgtt tacaagcctg ccttttactg atcattgaga acaagtgcaa acatttgaat
     3481 ttctgtcagt tgcagtatga agactcctgg gaacactcac tactagatta acttgttctg
     3541 gtgtctcttc atgtatagct gtattcttag aagttcaatc cgcacaatga tctctgaagt
     3601 ctgaagactt tttgaaaact gttgctatgt cttgtaaaag tggtttccaa aagacaaatg
     3661 taactgtcct actgatattt cttgctgtag taagtaagta acacttggca ttatcttctt
     3721 aacccgtgta aggactagaa ctgctatcaa ctaaacgagg atattagtcc tttgtcttct
     3781 cctgtgtgct caaaggaaag ataatgttac tgttatattt ctcgtctgca ccaaaaataa
     3841 ataaataaat aataaataaa taaataaaca aacaaataaa taaatgtgaa taaaaagctc
     3901 aaaaaaaaaa aaaaaa
//
