LOCUS       XM_030245746            6068 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TSPO associated protein 1 (Tspoap1),
            transcript variant X12, mRNA.
ACCESSION   XM_030245746
VERSION     XM_030245746.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030245746.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6068
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..6068
                     /gene="Tspoap1"
                     /gene_synonym="Bzrap1; D230016K05; mKIAA0612; PRAX-1"
                     /note="TSPO associated protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     ESTs, 651 long SRA reads, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 19 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:207777"
                     /db_xref="MGI:MGI:2450877"
     CDS             658..5052
                     /gene="Tspoap1"
                     /gene_synonym="Bzrap1; D230016K05; mKIAA0612; PRAX-1"
                     /codon_start=1
                     /product="peripheral-type benzodiazepine
                     receptor-associated protein 1 isoform X11"
                     /protein_id="XP_030101606.1"
                     /db_xref="GeneID:207777"
                     /db_xref="MGI:MGI:2450877"
                     /translation="MREVAQRRQQLEVEHEQARLSLQEKQEEVRRLQQAQAEAKREHE
                     GAVQLLEARVRELEGQCRSQTERFSLLAQELQAFRLHPGPLDLLTSALGCSALGDHPP
                     PHCCCSIPQPCQGSGPKDLDLPPGSPGRCTPKSSEPALTTLTGIPRRTAKKAESLSNS
                     SRSESIHNSPKSCPTPEVDTASEVEELEVDSVSLLPAAPESHSGGARIQVFLARYSYN
                     PFEGPNENPEAELPLTAGEYIYIYGNMDEDGFFEGELMDGRRGLVPSNFVERVSDDDL
                     LSTLPRELADSSHSSGPELSFLSGGGGGCSSGGQSSGGRSQPRPEEEAAGDELSLSPP
                     PEGLGEPLAVPYPRHITVLKQLAHSVVLAWELPPERVDLRGFHIFVNGELRQALGPGV
                     PPKAVLENMDLRTGPLHVSVQALTSKGSSDPLRCCLAVGAGAGVVPSQLRIHRLTATS
                     AEIAWVPGNSNLAHAIYLNGEECPPARPSTYWATFCNLRPGTLYQARVEAQIPSQGPW
                     EPGWERPEQRAATLQFTTLPAGLPDAPLDVQAEPGPSPGILMISWLPVTIDAAGTSNG
                     VRVTGYAIYADGQKIMEVASPTAGSVLVEVSQLQLLQACHEVTVRTMSPHGESSDSIP
                     APVAPALASACQPARMSCLSPRPSPEVRTPLASVSPGLGDTSFPLRHPVPHGTQDFSA
                     SLSIEMSKGPQEEPPVPCSQEEAGAAVRSISEEKRAIEPTLGQEGPEPVAPSLAKQEV
                     ECTSGDAGPVPCSTQGELTQKKPSIEACHGGDLDSGLKLRSEKEDMSELGVHLVNSLV
                     DHSRNSDLSDIQEEEEEEEEEEEELGSRPCSSQKQVAGNSIRENGAKPQPDPFCETDS
                     DEEILEQILELPLQRLCSKKLFSIPEEEEEEEEEEGLEKPGPSRTSQDPSQPELALLG
                     PGCDSSQPQGPGLCPLSPELSGVREHLEDVLGVVGGNGRRRGGGSPEKLPNRKRPQDP
                     REHCSRLLGNGGPQASARPVPPRERGSLPVIEGTRVGQEPGGRGRPGLSRRCPRGPAP
                     ESSLVSCLSPKCLEISIEYDSEDEQEAGSGGVSINSSCYPTDGEAWGTAAVGRPRGPP
                     KVNPGPNAYLRLPAWEKGEPERRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRR
                     GARVPRSGTTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKE
                     GQLLKVFGDKDADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLT
                     EASGNGPSVYSSAHTPGPPPKPRRSKKVELEGPTQLCPGEKPSLGKCLGRGPPKLIHS
                     AAQKTSRPMVAAFDYNPRENSPNMDVEAELPFRAGDVITVFGNMDDDGFYYGELNGQR
                     GLVPSNFLEGPGPESGSLESGTSQAESQDPRITIQGPPVPPGWHCALSSGSSSRTKLG
                     ESQSIAEKKQGLLAKAKELLKRLGSRKD"
ORIGIN      
        1 ccgcgctggt acctgcgccg cgccctaccc ctgggggttt cggggttcct ccctccgcag
       61 gcctgtgccc cacggggcca gcctggccgc ccctgccatg tcgatagtgg tacagcccgg
      121 ccgcaaatcc ctggttgccc tggcagccgc ccggggccca gcccgcaccg cctcctcccg
      181 cagctgcggt agcgcgggga cgcccccttc agcgtccgcc cggtgtccag gcctggcccg
      241 ggttatcccg gcggggcggt gcatacgact cagttccagg ccgtacttca ggatgatgtg
      301 gagagcccac aggtagtcct aagggaacca gagaagcagc aaagggtgca gcagctggag
      361 tctgagctct gcaagaagcg aaagaaatgc gagagtctgg agcaggaagc caggaaaaag
      421 cagaggcgat gtgaggagct ggagctacag ctgagggcag cccagaatga aaatgcccgc
      481 ctggtggagg agaactctcg gctcagtggg agagccacag agaaggagca ggtggaatgg
      541 gagaattcgg agctgaaggg acagctcctg ggggtgacac aagagaggga ctcggccctt
      601 cttaagagcc agggcctgca aagcaagctg gagagcctgg agcaggtgct gaagcatatg
      661 cgggaggtgg cccagcgccg gcagcagctg gaggtggagc atgagcaggc taggctcagc
      721 ctgcaggaga agcaggagga ggtccggagg ctgcagcagg cccaggcaga agccaagagg
      781 gaacatgagg gagccgttca gctgctggag gcccgggttc gagagcttga gggccagtgc
      841 cgaagccaga ctgagcgttt cagccttctg gctcaggagc tccaggcctt ccgtctgcac
      901 ccaggccctc tggatctgct tacttcagcc ttgggctgta gtgcccttgg ggaccacccg
      961 cccccccact gctgctgctc tatccctcag ccctgccagg ggtccggccc caaagatctt
     1021 gacctcccac cgggctcccc aggacgctgc acccccaaat cttctgaacc tgctctcacc
     1081 acccttactg gaatccctcg aaggacagct aagaaggccg agtctctttc taattcttct
     1141 cgctcagagt ccatccacaa cagccccaag tcatgtccca caccagaggt ggacacagcc
     1201 agtgaggtgg aggaactgga ggtagacagt gtttccctgc tcccagcagc tccggagagt
     1261 cactcgggag gagccagaat ccaggtcttc ctagcacgct atagctacaa cccctttgag
     1321 ggtcccaatg agaatccaga ggccgagctt cctctgacag cgggcgagta tatctacatc
     1381 tatggtaaca tggacgagga tggctttttt gaaggggagc tcatggatgg ccgaaggggc
     1441 ctggtccctt ccaactttgt agagcgcgtg tctgatgatg atcttctgtc caccctccct
     1501 cgggagctgg ctgattcgtc gcacagctca ggccccgagc tcagtttcct gagtggaggc
     1561 gggggtggtt gcagtagtgg gggccagagc agcgggggac gtagccagcc cagaccagag
     1621 gaggaggccg caggagatga actcagtctg agccccccac cagagggact tggcgagcct
     1681 ctggctgtgc cttacccccg acacatcacg gttctcaagc agttagccca cagtgtggtg
     1741 ctggcctggg agttgcctcc tgagagagta gatctgcgtg gcttccatat ctttgtcaat
     1801 ggggaactcc gtcaggcctt ggggcctggg gtgcccccca aagctgtgct tgaaaacatg
     1861 gacctgcgga ctgggcctct ccatgtgtct gtccaggccc taaccagcaa gggcagctca
     1921 gaccctctgc gctgttgcct ggctgtgggt gccggggctg gggtggtacc cagccagctg
     1981 cggatccatc ggctgacagc cacatctgct gagatcgcct gggtgccggg gaatagcaac
     2041 ttggcccatg ccatctacct caatggagaa gagtgcccac ctgctcgccc cagcacatat
     2101 tgggcaacct tttgtaacct gagacctggc acactctatc aggcccgagt ggaggctcag
     2161 atcccatctc aggggccttg ggaaccaggc tgggagaggc cagagcagag agctgctacc
     2221 ttgcagttca ccacacttcc agcaggtctg cctgatgccc cactggatgt acaggctgaa
     2281 ccaggaccct ctcctggaat cttgatgatc agttggctcc ctgtcaccat tgatgctgct
     2341 ggtacctcca atggtgtccg ggttacaggc tatgccatct atgctgatgg gcagaagatt
     2401 atggaggtgg cttcccccac agcaggcagt gtgctggtgg aggtgtccca gctgcagctg
     2461 ttgcaggcct gccatgaggt gactgtacgc actatgtcac cccatggcga gtccagtgac
     2521 tccatcccgg cccccgttgc cccagccctg gcttctgcct gccagccagc caggatgtcc
     2581 tgtctctcac cacgaccaag cccagaggtc agaacacccc ttgcttcagt ctccccaggg
     2641 cttggggata ccagctttcc cctccggcat cctgtccccc atggaactca agatttctct
     2701 gcaagtcttt ccatagagat gtccaaagga ccccaggagg aacctccagt cccttgctct
     2761 caggaagagg ctggggcagc tgtgcggagc atctcagaag agaagagggc tatcgagcca
     2821 actctgggcc aggaaggccc tgagcctgtg gctccttccc tggctaagca ggaagtggag
     2881 tgcacttcag gagatgctgg ccctgtacct tgctccaccc aaggagagct gacccagaag
     2941 aagccaagta ttgaagcctg ccatggggga gatctggact ccgggctgaa acttagatct
     3001 gagaaagaag atatgtcaga gcttggagtt cacctggtga attcccttgt ggatcacagc
     3061 cgcaactcag acttatcaga catccaggaa gaagaggaag aggaggaaga agaggaagag
     3121 gaactgggtt ccaggccttg ttcctcccag aagcaggttg ctggcaacag catcagggag
     3181 aatggagcca agccccagcc agaccccttt tgtgagactg acagcgacga ggagatcttg
     3241 gagcagatac tggagttgcc tctccagcgg ctctgcagca agaagctgtt cagcatccct
     3301 gaggaggaag aggaggagga agaggaggaa gggctggaga aaccagggcc cagccgcact
     3361 tcccaagacc ctagccagcc tgaacttgcg ttgctagggc cgggctgtga tagcagtcag
     3421 ccccagggac ctggcctgtg tcccttgtct cctgagctct ctggggtcag ggagcacctg
     3481 gaggatgtgc tgggagtcgt tggtggaaac ggcaggagga gaggaggtgg ctccccggag
     3541 aaactcccaa accgcaagcg acctcaggac ccccgagaac attgcagccg gcttcttggc
     3601 aatggcgggc cccaggcctc tgcacggccg gtccctccac gggagagggg cagcctccct
     3661 gtgattgagg gcaccagggt tggacaggag cccggtggga gagggcggcc gggtctttcc
     3721 cggaggtgtc cccgtggccc tgctccagaa tccagcttag tcagctgcct ctctccaaag
     3781 tgtttggaga tcagtattga atatgattct gaggatgagc aggaggcggg cagcgggggt
     3841 gtcagcatca acagctcctg ctaccccaca gatggggagg cctggggcac agcggcagta
     3901 ggaaggccca ggggacctcc gaaggtcaat ccaggcccca acgcctacct gcgcctccca
     3961 gcctgggaga aaggggagcc agagcggaga ggccgcagtg cgattggcag aaccaaggag
     4021 ccaccctccc gggcaacaga aactggggag tccagagggc aggacaactc tgggcggaga
     4081 ggaccccaga ggagaggggc ccgggtgcct aggtctggta ccactgagct ggcccctcca
     4141 aggagccccc aagaagcacc acctcatcag gacctgcctg tgagggtctt tgtggctctg
     4201 tttgactatg accctgtatc aatgtcaccg aaccctgatg ccggagaaga ggaactgccc
     4261 tttaaggagg gccaactcct caaggtgttt ggagacaagg acgctgatgg tttctaccgg
     4321 ggtgagagtg ggggccgtac aggctacatc ccctgcaaca tggtggctga ggtggctgtg
     4381 gacagtccag cagggagaca acagctgctc cagcggggtt tcttgccccc aaatgttctc
     4441 accgaggcct caggaaatgg tccctctgtg tactcctcag cacacacacc cgggcctccc
     4501 cccaagcctc gtcggtccaa gaaagtggag ctggaaggtc ctacacagct ctgtccaggt
     4561 gagaagccat ctttgggcaa gtgtctggga agaggtcctc ctaagctgat tcattctgct
     4621 gcccagaaaa cctcccgacc tatggtggct gcatttgact ataatcctcg ggagaactcc
     4681 cccaatatgg atgtggaggc agagctgccc ttcagagcag gggatgtcat tactgtgttt
     4741 gggaacatgg acgatgatgg tttctactat ggggagctga atggacaaag gggcctggtt
     4801 ccatccaact tcctggaagg ccctgggcct gagtcaggca gcctagagtc tgggacatct
     4861 caagccgaga gtcaggaccc cagaatcacc atacaagggc ctccagtgcc cccaggctgg
     4921 cactgtgccc tcagctctgg aagttcctcc aggaccaaac tgggggagtc acagagcata
     4981 gctgagaaga agcagggtct cctcgccaaa gcaaaggaac ttctcaaaag gctgggctcc
     5041 aggaaagact gaggctgccg tccgtctgtc ctgcagacag aagtggccct ggatcaactc
     5101 actggctgga cagggaaacc caactcctga tctctgagca gactggcact caaaggagcc
     5161 caggggacct ggtgagggtg gggttacctg cacccttagt gaggagtcct ctagatgggc
     5221 tcttccagag ggaactgagc cccagagtaa gtaatcaagc accaagcact gtcagatcag
     5281 gactggaccc acgcctctgg attcccagtc tgttctcatc tactcctgct ttgctaccac
     5341 gctctgtagg tcccttcttg gccttccctg ctccaaggat aggccctggg tggagatagg
     5401 gaccactcta acgatggctc tggctgtcct cccgatggat cgtttgcact ggactgtccc
     5461 ctggggcggg ggcagagcca tgtacatact cagtgtatat atgtccatac tcagtgcata
     5521 tatgtacata ctcagtgtat atatgtacat actcagtgcc tcagtccagg tcctccctct
     5581 gcttcaccgc acaggccagg ggaggagaaa ggccatgcca aagcgggcct gaccccgccc
     5641 catagtgctc cacccctccc tgcccaggcc acctggcctc tgtgtgatcc catcctctca
     5701 gacccagggg accagggggc agaaagcagg agttgggttt gccttatttt gctcattgga
     5761 ttcaacttct ctcttgcatc attttcttcc agtccctgtt gggtccaggg gctgagggaa
     5821 aggacggatt tatgcagcta ttttcataca ttccctgttc agagtgggta ggggtgtctc
     5881 ccctcactct aaccatccca tccttcaccc cttgtctggg cgagtctctt tgcatgtttt
     5941 cttcgctgtg gtgggagatg tttgattgaa ccctcgcccc ctaccctggt ctccaggggt
     6001 gtgggatagt gggggcattt gtttaaaaag acattttact ataataaagt ctattttcac
     6061 aaaattga
//
