LOCUS       XM_006532709            9105 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TSPO associated protein 1 (Tspoap1),
            transcript variant X6, mRNA.
ACCESSION   XM_006532709
VERSION     XM_006532709.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006532709.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9105
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..9105
                     /gene="Tspoap1"
                     /gene_synonym="Bzrap1; D230016K05; mKIAA0612; PRAX-1"
                     /note="TSPO associated protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 49 ESTs, 629 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:207777"
                     /db_xref="MGI:MGI:2450877"
     CDS             3206..8089
                     /gene="Tspoap1"
                     /gene_synonym="Bzrap1; D230016K05; mKIAA0612; PRAX-1"
                     /codon_start=1
                     /product="peripheral-type benzodiazepine
                     receptor-associated protein 1 isoform X6"
                     /protein_id="XP_006532772.1"
                     /db_xref="GeneID:207777"
                     /db_xref="MGI:MGI:2450877"
                     /translation="MEQLTTLPRLGDLGAMEPWALPAWQHWTQGQGCKPGDASPSIAG
                     TPTALQVKGLRFEESSKPEGAHSPGPVGNTDPEATETGLPKLGQQAESPGYSCSGLEE
                     EEAQAYKAKFNIGFGDRPNLELLRALGELQQRCTILKEENQMLRKSSFPETEEKVRRL
                     KRKNAELAVIAKRLEERAQKLQETNMRVVSAPVPRPGSSLELCRKALARQRARDLSET
                     ASALLAKDKQIAALQRECRELQARLSLVGKEGPQWLHMRDFDRLLRESQREVLRLQRQ
                     IALRNQREPLRPARSPGPTAPSRVGAPAPGAPGEAVLQDDVESPQVVLREPEKQQRVQ
                     QLESELCKKRKKCESLEQEARKKQRRCEELELQLRAAQNENARLVEENSRLSGRATEK
                     EQVEWENSELKGQLLGVTQERDSALLKSQGLQSKLESLEQVLKHMREVAQRRQQLEVE
                     HEQARLSLQEKQEEVRRLQQAQAEAKREHEGAVQLLESTLDSMQARVRELEGQCRSQT
                     ERFSLLAQELQAFRLHPGPLDLLTSALGCSALGDHPPPHCCCSIPQPCQGSGPKDLDL
                     PPGSPGRCTPKSSEPALTTLTGIPRRTAKKAESLSNSSRSESIHNSPKSCPTPEVDTA
                     SEVEELEVDSVSLLPAAPESHSGGARIQVFLARYSYNPFEGPNENPEAELPLTAGEYI
                     YIYGNMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLLSTLPRELADSSHSSGPELSF
                     LSGGGGGCSSGGQSSGGRSQPRPEEEAAGDELSLSPPPEGLGEPLAVPYPRHITVLKQ
                     LAHSVVLAWELPPERVDLRGFHIFVNGELRQALGPGVPPKAVLENMDLRTGPLHVSVQ
                     ALTSKGSSDPLRCCLAVGAGAGVVPSQLRIHRLTATSAEIAWVPGNSNLAHAIYLNGE
                     ECPPARPSTYWATFCNLRPGTLYQARVEAQIPSQGPWEPGWERPEQRAATLQFTTLPA
                     GLPDAPLDVQAEPGPSPGILMISWLPVTIDAAGTSNGVRVTGYAIYADGQKIMEVASP
                     TAGSVLVEVSQLQLLQACHEVTVRTMSPHGESSDSIPAPVAPALASACQPARMSCLSP
                     RPSPEVRTPLASVSPGLGDTSFPLRHPVPHGTQDFSASLSIEMSKGPQEEPPVPCSQE
                     EAGAAVRSISEEKRAIEPTLGQEGPEPVAPSLAKQEVECTSGDAGPVPCSTQGELTQK
                     KPSIEACHGGDLDSGLKLRSEKEDMSELGVHLVNSLVDHSRNSDLSDIQEEEEEEEEE
                     EEELGSRPCSSQKQVAGNSIRENGAKATETGESRGQDNSGRRGPQRRGARVPRSGTTE
                     LAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDKD
                     ADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYS
                     SAHTPGPPPKPRRSKKVELEGPTQLCPGEKPSLGKCLGRGPPKLIHSAAQKTSRPMVA
                     AFDYNPRENSPNMDVEAELPFRAGDVITVFGNMDDDGFYYGELNGQRGLVPSNFLEGP
                     GPESGSLESGTSQAESQDPRITIQGPPVPPGWHCALSSGSSSRTKLGESQSIAEKKQG
                     LLAKAKELLKRLGSRKD"
ORIGIN      
        1 tcccaagtgc tgggattaaa ggtgtgtgcc atcactgcct ggctccaaga ggattcttat
       61 tagtgtaaga gttgggcaaa accacgctag cacagtgtgt gcccacctgc cttgtacatg
      121 tctacacagg tcattggtgt taataaaaca cactttcacc atcatgtgca tttcatcagg
      181 gcctatacac cgatgccagc cacatgcatg aactgtgaca tatagacaat gagacgtggc
      241 tggtgtatca tatgggtata cagtcaccta ggccaaacac atgttcatta gtacttacac
      301 atataatgcc aaagaatata cccattagtg acattcacat gtggtggctt catgtacata
      361 agacactaac cgcgagatca tcaagatctc tctggattgc cacattgatg aattgaaaaa
      421 catttaattt gtgtgtgtgt gtgaatgctg gtgagtgtac caatgtactg tggtgtgcat
      481 ttagggccag agaacacctt gcgtggagga gttctccact ttggccacgt ggttactggg
      541 gatcaaactc cagtggtcag gcttggtggc aaatgtccta cccacagagc catcctattg
      601 actaggattg aaaaacaaaa tgtgtttttg attgcaagcc aattgtagat gtaattacaa
      661 ccccagcaac tggaagagga aggaccagct tgagctaaga ctcttaccag agaggaagct
      721 gtctctttat aatgtataga ctttgcttgt tattcttgtg atttcctcaa tagtacagta
      781 caattatttt aacattcaca tcgtattata aaataggtat aaacaatcta gagatgattt
      841 aaggcatggg ggtggggtgg ggctgggctg aggatatggt ttagtggtag agtgcttgcc
      901 tagcatgcaa gagaccttgg gtatacagaa ggatgtgtat aagccatggg cggatatttc
      961 atcaccttac ataaaaggac ttaagcattt gagaacttag tggggtatcc tgagatgatc
     1021 ttatagacag tccccttagg catggagggg tgagaatata tatacagaga ctgcgtgcac
     1081 atcatgccag gcaagtttat catgtacata gatcattgta tgccattgta cattattata
     1141 tgacaatgta tgtcataatg tgttagtgct gtataatggc atgatatctg tgatttatag
     1201 caaaatgcaa tgataaactc atacgtaatt gcatgcacat agacattgta gcaaatagac
     1261 atacaatgac acaaaaccat gcacagatat atatccaatg agattcatag acaaaatagc
     1321 acacatacat gcagtgatct ccatgtatac acagacatac tatgcatact cttctataca
     1381 tacatgtaat atgacatgca tatgcatgct gactgaaagt tacatgacat agcatgtgta
     1441 ctgatgttta gactgcttta gagaaatgaa tgttaccttc tctcttatgc aactccaacc
     1501 cctacccagt tccattggct ctggcctggg tggagcctac tgtctgggtg gggggtgttc
     1561 tctatgcttt agctgctatt ccataggggt gccacatgag ggccctcgac cttggcttgt
     1621 cttgcgtcta ggagcaacat tcttatctct cgagatctag gtgccccaca tacaggcaga
     1681 cacctaggtt ggggcaattc ctatgtcctt gttcccaaaa gccatttttt tttcatagca
     1741 agtaaataaa taaagcctaa tgctagacag aagatgaact tcctgatggt tgagggaaaa
     1801 tcagcccaaa aggtcctgtc ttatgatctc tcctgctagc ctgtgaaggc tgggctgtcc
     1861 cccaaatgtg atctgccatg gggaagctga agtcgttttt cagcctattt caacactctg
     1921 tccttttgct cgtctttcta ttttcagact tttatttctt tgttttattc caaatcccac
     1981 catttcagct ctgtcctttt ctacagctag gtctctgtca cattgttcta tccccatcag
     2041 tcttgcctga aaggagagga ctgtctctac tccctttcct ctgcaccctg gaagtgaggg
     2101 tctgtggggt caaggggatg aagaggccat gttggggggt ccggaggggg tagctttcta
     2161 acctaccatc cagtaaggaa cctgctcttt ccactgtccc gaccctgcca gcttgcctgc
     2221 cggtccagcc caccagtcca gctccatcgt catggaaacc agcagctgac ttcctattgg
     2281 tgggcaggag gggaggagga gggggaaggg agggatgatg atgctcccct gctccccact
     2341 ccccattctg aggctctgcc ctccttcgtg cccaccatct catttgggga gctccgggac
     2401 cgcgagggac ccttgcagtc cctcgagctg agactagctg aggcagagac tatgaggcaa
     2461 gccgcccatc gacccaggcc tccttaggac cgcccagcca cccagcaagc aactgatcgg
     2521 cggcagccag cggagagaaa agctggagat aaaggaccac agtggatcac tggggatcat
     2581 tcccaggaac tcctgcggac cctttccagg cagagtggtc gtgatgggtg gccagactca
     2641 cagacactga aagacacacg ccactacaga tacaccgggc tttacaacac tgagacagga
     2701 ccggcgacag catcacacac tgccacagcc ctgcaataca gacagcccct acccccacgc
     2761 agaaacaact ggtaactctt aaataggcac agacagtgac acatagcacc acccttctca
     2821 acatacacaa gtcggagtat tcatcctcca atcacataat aaaacatcac tgacctgcag
     2881 ggacagacct ggaggcacac gtacatatat accttcagcc aggcactcct ggtggtggtc
     2941 tctcaccccc ccacacacac cccgtacaca cacacacaca cacacaagag agagagagag
     3001 aaccatgagc aaaccccagc tccagtctgg caaccccgat accttctgaa ccctccttcg
     3061 tgggtgggaa gagctcagcc aacctctgat ggactcggtg aagccaaaca cttacaggga
     3121 gaatggtcta gtctggcatg acccttgtca gtcttcccgc tggtgatgtc cccaggtcca
     3181 ggttcggggg ccccttgccg aaaccatgga gcaactgaca accctcccac ggcttggaga
     3241 ccttggagcc atggagccat gggcactgcc tgcctggcag cactggactc agggccaggg
     3301 gtgcaaacct ggagatgcat ctccaagcat tgctggtact ccgacagctc tgcaggttaa
     3361 aggattgagg tttgaagaga gttccaagcc tgagggagct catagccctg gacctgtcgg
     3421 aaatactgat cctgaagcaa cagagaccgg gctgcctaag ctggggcagc aagcagagag
     3481 ccctgggtac agctgttccg ggctggagga ggaggaggca caggcttata aggccaagtt
     3541 caacataggc ttcggggaca ggcctaatct ggagctgcta agggccctgg gagagctgca
     3601 gcagcgctgt accatcctga aggaggaaaa ccagatgctg agaaaaagca gcttcccaga
     3661 gacggaggag aaggtacgga ggctgaagcg gaagaatgct gaactggcag tcattgccaa
     3721 gcgcctggag gagagggcac agaagctgca ggaaacgaac atgagggtgg tgagtgcccc
     3781 tgtgccccga cccggatcca gtttggagtt gtgccgtaag gctctagctc gccagcgagc
     3841 ccgagacctc agtgagacag ccagtgcact gttggccaag gacaaacaga ttgctgcctt
     3901 gcagcgggag tgcagggagc tgcaggccag actctctctg gtgggcaagg aaggtcccca
     3961 gtggctgcat atgcgggact tcgaccggtt gctgcgcgag tcccaacggg aggtgctgcg
     4021 gctgcagagg cagatcgccc tgcgcaacca gcgggagccg ctccggcctg cccggtcccc
     4081 gggtcctact gccccatcta gagtaggggc gccggccccc ggggccccgg gagaggccgt
     4141 acttcaggat gatgtggaga gcccacaggt agtcctaagg gaaccagaga agcagcaaag
     4201 ggtgcagcag ctggagtctg agctctgcaa gaagcgaaag aaatgcgaga gtctggagca
     4261 ggaagccagg aaaaagcaga ggcgatgtga ggagctggag ctacagctga gggcagccca
     4321 gaatgaaaat gcccgcctgg tggaggagaa ctctcggctc agtgggagag ccacagagaa
     4381 ggagcaggtg gaatgggaga attcggagct gaagggacag ctcctggggg tgacacaaga
     4441 gagggactcg gcccttctta agagccaggg cctgcaaagc aagctggaga gcctggagca
     4501 ggtgctgaag catatgcggg aggtggccca gcgccggcag cagctggagg tggagcatga
     4561 gcaggctagg ctcagcctgc aggagaagca ggaggaggtc cggaggctgc agcaggccca
     4621 ggcagaagcc aagagggaac atgagggagc cgttcagctg ctggagtcta ccttggattc
     4681 catgcaggcc cgggttcgag agcttgaggg ccagtgccga agccagactg agcgtttcag
     4741 ccttctggct caggagctcc aggccttccg tctgcaccca ggccctctgg atctgcttac
     4801 ttcagccttg ggctgtagtg cccttgggga ccacccgccc ccccactgct gctgctctat
     4861 ccctcagccc tgccaggggt ccggccccaa agatcttgac ctcccaccgg gctccccagg
     4921 acgctgcacc cccaaatctt ctgaacctgc tctcaccacc cttactggaa tccctcgaag
     4981 gacagctaag aaggccgagt ctctttctaa ttcttctcgc tcagagtcca tccacaacag
     5041 ccccaagtca tgtcccacac cagaggtgga cacagccagt gaggtggagg aactggaggt
     5101 agacagtgtt tccctgctcc cagcagctcc ggagagtcac tcgggaggag ccagaatcca
     5161 ggtcttccta gcacgctata gctacaaccc ctttgagggt cccaatgaga atccagaggc
     5221 cgagcttcct ctgacagcgg gcgagtatat ctacatctat ggtaacatgg acgaggatgg
     5281 cttttttgaa ggggagctca tggatggccg aaggggcctg gtcccttcca actttgtaga
     5341 gcgcgtgtct gatgatgatc ttctgtccac cctccctcgg gagctggctg attcgtcgca
     5401 cagctcaggc cccgagctca gtttcctgag tggaggcggg ggtggttgca gtagtggggg
     5461 ccagagcagc gggggacgta gccagcccag accagaggag gaggccgcag gagatgaact
     5521 cagtctgagc cccccaccag agggacttgg cgagcctctg gctgtgcctt acccccgaca
     5581 catcacggtt ctcaagcagt tagcccacag tgtggtgctg gcctgggagt tgcctcctga
     5641 gagagtagat ctgcgtggct tccatatctt tgtcaatggg gaactccgtc aggccttggg
     5701 gcctggggtg ccccccaaag ctgtgcttga aaacatggac ctgcggactg ggcctctcca
     5761 tgtgtctgtc caggccctaa ccagcaaggg cagctcagac cctctgcgct gttgcctggc
     5821 tgtgggtgcc ggggctgggg tggtacccag ccagctgcgg atccatcggc tgacagccac
     5881 atctgctgag atcgcctggg tgccggggaa tagcaacttg gcccatgcca tctacctcaa
     5941 tggagaagag tgcccacctg ctcgccccag cacatattgg gcaacctttt gtaacctgag
     6001 acctggcaca ctctatcagg cccgagtgga ggctcagatc ccatctcagg ggccttggga
     6061 accaggctgg gagaggccag agcagagagc tgctaccttg cagttcacca cacttccagc
     6121 aggtctgcct gatgccccac tggatgtaca ggctgaacca ggaccctctc ctggaatctt
     6181 gatgatcagt tggctccctg tcaccattga tgctgctggt acctccaatg gtgtccgggt
     6241 tacaggctat gccatctatg ctgatgggca gaagattatg gaggtggctt cccccacagc
     6301 aggcagtgtg ctggtggagg tgtcccagct gcagctgttg caggcctgcc atgaggtgac
     6361 tgtacgcact atgtcacccc atggcgagtc cagtgactcc atcccggccc ccgttgcccc
     6421 agccctggct tctgcctgcc agccagccag gatgtcctgt ctctcaccac gaccaagccc
     6481 agaggtcaga acaccccttg cttcagtctc cccagggctt ggggatacca gctttcccct
     6541 ccggcatcct gtcccccatg gaactcaaga tttctctgca agtctttcca tagagatgtc
     6601 caaaggaccc caggaggaac ctccagtccc ttgctctcag gaagaggctg gggcagctgt
     6661 gcggagcatc tcagaagaga agagggctat cgagccaact ctgggccagg aaggccctga
     6721 gcctgtggct ccttccctgg ctaagcagga agtggagtgc acttcaggag atgctggccc
     6781 tgtaccttgc tccacccaag gagagctgac ccagaagaag ccaagtattg aagcctgcca
     6841 tgggggagat ctggactccg ggctgaaact tagatctgag aaagaagata tgtcagagct
     6901 tggagttcac ctggtgaatt cccttgtgga tcacagccgc aactcagact tatcagacat
     6961 ccaggaagaa gaggaagagg aggaagaaga ggaagaggaa ctgggttcca ggccttgttc
     7021 ctcccagaag caggttgctg gcaacagcat cagggagaat ggagccaagg caacagaaac
     7081 tggggagtcc agagggcagg acaactctgg gcggagagga ccccagagga gaggggcccg
     7141 ggtgcctagg tctggtacca ctgagctggc ccctccaagg agcccccaag aagcaccacc
     7201 tcatcaggac ctgcctgtga gggtctttgt ggctctgttt gactatgacc ctgtatcaat
     7261 gtcaccgaac cctgatgccg gagaagagga actgcccttt aaggagggcc aactcctcaa
     7321 ggtgtttgga gacaaggacg ctgatggttt ctaccggggt gagagtgggg gccgtacagg
     7381 ctacatcccc tgcaacatgg tggctgaggt ggctgtggac agtccagcag ggagacaaca
     7441 gctgctccag cggggtttct tgcccccaaa tgttctcacc gaggcctcag gaaatggtcc
     7501 ctctgtgtac tcctcagcac acacacccgg gcctcccccc aagcctcgtc ggtccaagaa
     7561 agtggagctg gaaggtccta cacagctctg tccaggtgag aagccatctt tgggcaagtg
     7621 tctgggaaga ggtcctccta agctgattca ttctgctgcc cagaaaacct cccgacctat
     7681 ggtggctgca tttgactata atcctcggga gaactccccc aatatggatg tggaggcaga
     7741 gctgcccttc agagcagggg atgtcattac tgtgtttggg aacatggacg atgatggttt
     7801 ctactatggg gagctgaatg gacaaagggg cctggttcca tccaacttcc tggaaggccc
     7861 tgggcctgag tcaggcagcc tagagtctgg gacatctcaa gccgagagtc aggaccccag
     7921 aatcaccata caagggcctc cagtgccccc aggctggcac tgtgccctca gctctggaag
     7981 ttcctccagg accaaactgg gggagtcaca gagcatagct gagaagaagc agggtctcct
     8041 cgccaaagca aaggaacttc tcaaaaggct gggctccagg aaagactgag gctgccgtcc
     8101 gtctgtcctg cagacagaag tggccctgga tcaactcact ggctggacag ggaaacccaa
     8161 ctcctgatct ctgagcagac tggcactcaa aggagcccag gggacctggt gagggtgggg
     8221 ttacctgcac ccttagtgag gagtcctcta gatgggctct tccagaggga actgagcccc
     8281 agagtaagta atcaagcacc aagcactgtc agatcaggac tggacccacg cctctggatt
     8341 cccagtctgt tctcatctac tcctgctttg ctaccacgct ctgtaggtcc cttcttggcc
     8401 ttccctgctc caaggatagg ccctgggtgg agatagggac cactctaacg atggctctgg
     8461 ctgtcctccc gatggatcgt ttgcactgga ctgtcccctg gggcgggggc agagccatgt
     8521 acatactcag tgtatatatg tccatactca gtgcatatat gtacatactc agtgtatata
     8581 tgtacatact cagtgcctca gtccaggtcc tccctctgct tcaccgcaca ggccagggga
     8641 ggagaaaggc catgccaaag cgggcctgac cccgccccat agtgctccac ccctccctgc
     8701 ccaggccacc tggcctctgt gtgatcccat cctctcagac ccaggggacc agggggcaga
     8761 aagcaggagt tgggtttgcc ttattttgct cattggattc aacttctctc ttgcatcatt
     8821 ttcttccagt ccctgttggg tccaggggct gagggaaagg acggatttat gcagctattt
     8881 tcatacattc cctgttcaga gtgggtaggg gtgtctcccc tcactctaac catcccatcc
     8941 ttcacccctt gtctgggcga gtctctttgc atgttttctt cgctgtggtg ggagatgttt
     9001 gattgaaccc tcgcccccta ccctggtctc caggggtgtg ggatagtggg ggcatttgtt
     9061 taaaaagaca ttttactata ataaagtcta ttttcacaaa attga
//
