LOCUS       XM_006532706            6791 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TSPO associated protein 1 (Tspoap1),
            transcript variant X4, mRNA.
ACCESSION   XM_006532706
VERSION     XM_006532706.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 22, 2016 this sequence version replaced XM_006532706.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6791
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..6791
                     /gene="Tspoap1"
                     /gene_synonym="Bzrap1; D230016K05; mKIAA0612; PRAX-1"
                     /note="TSPO associated protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     ESTs, 788 long SRA reads, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 23 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:207777"
                     /db_xref="MGI:MGI:2450877"
     CDS             1..5577
                     /gene="Tspoap1"
                     /gene_synonym="Bzrap1; D230016K05; mKIAA0612; PRAX-1"
                     /codon_start=1
                     /product="peripheral-type benzodiazepine
                     receptor-associated protein 1 isoform X4"
                     /protein_id="XP_006532769.1"
                     /db_xref="GeneID:207777"
                     /db_xref="MGI:MGI:2450877"
                     /translation="MEQLTTLPRLGDLGAMEPWALPAWQHWTQGQGCKPGDASPSIAG
                     TPTALQVKGLRFEESSKPEGAHSPGPVGNTDPEATETGLPKLGQQAESPGYSCSGLEE
                     EEAQAYKAKFNIGFGDRPNLELLRALGELQQRCTILKEENQMLRKSSFPETEEKVRRL
                     KRKNAELAVIAKRLEERAQKLQETNMRVVSAPVPRPGSSLELCRKALARQRARDLSET
                     ASALLAKDKQIAALQRECRELQARLSLVGKEGPQWLHMRDFDRLLRESQREVLRLQRQ
                     IALRNQREPLRPARSPGPTAPSRVGAPAPGAPGEAVLQDDVESPQVVLREPEKQQRVQ
                     QLESELCKKRKKCESLEQEARKKQRRCEELELQLRAAQNENARLVEENSRLSGRATEK
                     EQVEWENSELKGQLLGVTQERDSALLKSQGLQSKLESLEQVLKHMREVAQRRQQLEVE
                     HEQARLSLQEKQEEVRRLQQAQAEAKREHEGAVQLLESTLDSMQARVRELEGQCRSQT
                     ERFSLLAQELQAFRLHPGPLDLLTSALGCSALGDHPPPHCCCSIPQPCQGSGPKDLDL
                     PPGSPGRCTPKSSEPALTTLTGIPRRTAKKAESLSNSSRSESIHNSPKSCPTPEVDTA
                     SEVEELEVDSVSLLPAAPESHSGGARIQVFLARYSYNPFEGPNENPEAELPLTAGEYI
                     YIYGNMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLLSTLPRELADSSHSSGPELSF
                     LSGGGGGCSSGGQSSGGRSQPRPEEEAAGDELSLSPPPEGLGEPLAVPYPRHITVLKQ
                     LAHSVVLAWELPPERVDLRGFHIFVNGELRQALGPGVPPKAVLENMDLRTGPLHVSVQ
                     ALTSKGSSDPLRCCLAVGAGAGVVPSQLRIHRLTATSAEIAWVPGNSNLAHAIYLNGE
                     ECPPARPSTYWATFCNLRPGTLYQARVEAQIPSQGPWEPGWERPEQRAATLQFTTLPA
                     GLPDAPLDVQAEPGPSPGILMISWLPVTIDAAGTSNGVRVTGYAIYADGQKIMEVASP
                     TAGSVLVEVSQLQLLQACHEVTVRTMSPHGESSDSIPAPVAPALASACQPARMSCLSP
                     RPSPEVRTPLASVSPGLGDTSFPLRHPVPHGTQDFSASLSIEMSKGPQEEPPVPCSQE
                     EAGAAVRSISEEKRAIEPTLGQEGPEPVAPSLAKQEVECTSGDAGPVPCSTQGELTQK
                     KPSIEACHGGDLDSGLKLRSEKEDMSELGVHLVNSLVDHSRNSDLSDIQEEEEEEEEE
                     EEELGSRPCSSQKQVAGNSIRENGAKPQPDPFCETDSDEEILEQILELPLQRLCSKKL
                     FSIPEEEEEEEEEEGLEKPGPSRTSQDPSQPELALLGPGCDSSQPQGPGLCPLSPELS
                     GVREHLEDVLGVVGGNGRRRGGGSPEKLPNRKRPQDPREHCSRLLGNGGPQASARPVP
                     PRERGSLPVIEGTRVGQEPGGRGRPGLSRRCPRGPAPESSLVSCLSPKCLEISIEYDS
                     EDEQEAGSGGVSINSSCYPTDGEAWGTAAVGRPRGPPKVNPGPNAYLRLPAWEKGEPE
                     RRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVPRSGTTELAPPRSPQEA
                     PPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDKDADGFYRGESG
                     GRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSSAHTPGPPPK
                     PRRSKKVELEGPTQLCPGEKPSLGKCLGRGPPKLIHSAAQKTSRPMVAAFDYNPRENS
                     PNMDVEAELPFRAGDVITVFGNMDDDGFYYGELNGQRGLVPSNFLEGPGPESGSLESG
                     TSQAESQRTRRRRVQC"
ORIGIN      
        1 atggagcaac tgacaaccct cccacggctt ggagaccttg gagccatgga gccatgggca
       61 ctgcctgcct ggcagcactg gactcagggc caggggtgca aacctggaga tgcatctcca
      121 agcattgctg gtactccgac agctctgcag gttaaaggat tgaggtttga agagagttcc
      181 aagcctgagg gagctcatag ccctggacct gtcggaaata ctgatcctga agcaacagag
      241 accgggctgc ctaagctggg gcagcaagca gagagccctg ggtacagctg ttccgggctg
      301 gaggaggagg aggcacaggc ttataaggcc aagttcaaca taggcttcgg ggacaggcct
      361 aatctggagc tgctaagggc cctgggagag ctgcagcagc gctgtaccat cctgaaggag
      421 gaaaaccaga tgctgagaaa aagcagcttc ccagagacgg aggagaaggt acggaggctg
      481 aagcggaaga atgctgaact ggcagtcatt gccaagcgcc tggaggagag ggcacagaag
      541 ctgcaggaaa cgaacatgag ggtggtgagt gcccctgtgc cccgacccgg atccagtttg
      601 gagttgtgcc gtaaggctct agctcgccag cgagcccgag acctcagtga gacagccagt
      661 gcactgttgg ccaaggacaa acagattgct gccttgcagc gggagtgcag ggagctgcag
      721 gccagactct ctctggtggg caaggaaggt ccccagtggc tgcatatgcg ggacttcgac
      781 cggttgctgc gcgagtccca acgggaggtg ctgcggctgc agaggcagat cgccctgcgc
      841 aaccagcggg agccgctccg gcctgcccgg tccccgggtc ctactgcccc atctagagta
      901 ggggcgccgg cccccggggc cccgggagag gccgtacttc aggatgatgt ggagagccca
      961 caggtagtcc taagggaacc agagaagcag caaagggtgc agcagctgga gtctgagctc
     1021 tgcaagaagc gaaagaaatg cgagagtctg gagcaggaag ccaggaaaaa gcagaggcga
     1081 tgtgaggagc tggagctaca gctgagggca gcccagaatg aaaatgcccg cctggtggag
     1141 gagaactctc ggctcagtgg gagagccaca gagaaggagc aggtggaatg ggagaattcg
     1201 gagctgaagg gacagctcct gggggtgaca caagagaggg actcggccct tcttaagagc
     1261 cagggcctgc aaagcaagct ggagagcctg gagcaggtgc tgaagcatat gcgggaggtg
     1321 gcccagcgcc ggcagcagct ggaggtggag catgagcagg ctaggctcag cctgcaggag
     1381 aagcaggagg aggtccggag gctgcagcag gcccaggcag aagccaagag ggaacatgag
     1441 ggagccgttc agctgctgga gtctaccttg gattccatgc aggcccgggt tcgagagctt
     1501 gagggccagt gccgaagcca gactgagcgt ttcagccttc tggctcagga gctccaggcc
     1561 ttccgtctgc acccaggccc tctggatctg cttacttcag ccttgggctg tagtgccctt
     1621 ggggaccacc cgccccccca ctgctgctgc tctatccctc agccctgcca ggggtccggc
     1681 cccaaagatc ttgacctccc accgggctcc ccaggacgct gcacccccaa atcttctgaa
     1741 cctgctctca ccacccttac tggaatccct cgaaggacag ctaagaaggc cgagtctctt
     1801 tctaattctt ctcgctcaga gtccatccac aacagcccca agtcatgtcc cacaccagag
     1861 gtggacacag ccagtgaggt ggaggaactg gaggtagaca gtgtttccct gctcccagca
     1921 gctccggaga gtcactcggg aggagccaga atccaggtct tcctagcacg ctatagctac
     1981 aacccctttg agggtcccaa tgagaatcca gaggccgagc ttcctctgac agcgggcgag
     2041 tatatctaca tctatggtaa catggacgag gatggctttt ttgaagggga gctcatggat
     2101 ggccgaaggg gcctggtccc ttccaacttt gtagagcgcg tgtctgatga tgatcttctg
     2161 tccaccctcc ctcgggagct ggctgattcg tcgcacagct caggccccga gctcagtttc
     2221 ctgagtggag gcgggggtgg ttgcagtagt gggggccaga gcagcggggg acgtagccag
     2281 cccagaccag aggaggaggc cgcaggagat gaactcagtc tgagcccccc accagaggga
     2341 cttggcgagc ctctggctgt gccttacccc cgacacatca cggttctcaa gcagttagcc
     2401 cacagtgtgg tgctggcctg ggagttgcct cctgagagag tagatctgcg tggcttccat
     2461 atctttgtca atggggaact ccgtcaggcc ttggggcctg gggtgccccc caaagctgtg
     2521 cttgaaaaca tggacctgcg gactgggcct ctccatgtgt ctgtccaggc cctaaccagc
     2581 aagggcagct cagaccctct gcgctgttgc ctggctgtgg gtgccggggc tggggtggta
     2641 cccagccagc tgcggatcca tcggctgaca gccacatctg ctgagatcgc ctgggtgccg
     2701 gggaatagca acttggccca tgccatctac ctcaatggag aagagtgccc acctgctcgc
     2761 cccagcacat attgggcaac cttttgtaac ctgagacctg gcacactcta tcaggcccga
     2821 gtggaggctc agatcccatc tcaggggcct tgggaaccag gctgggagag gccagagcag
     2881 agagctgcta ccttgcagtt caccacactt ccagcaggtc tgcctgatgc cccactggat
     2941 gtacaggctg aaccaggacc ctctcctgga atcttgatga tcagttggct ccctgtcacc
     3001 attgatgctg ctggtacctc caatggtgtc cgggttacag gctatgccat ctatgctgat
     3061 gggcagaaga ttatggaggt ggcttccccc acagcaggca gtgtgctggt ggaggtgtcc
     3121 cagctgcagc tgttgcaggc ctgccatgag gtgactgtac gcactatgtc accccatggc
     3181 gagtccagtg actccatccc ggcccccgtt gccccagccc tggcttctgc ctgccagcca
     3241 gccaggatgt cctgtctctc accacgacca agcccagagg tcagaacacc ccttgcttca
     3301 gtctccccag ggcttgggga taccagcttt cccctccggc atcctgtccc ccatggaact
     3361 caagatttct ctgcaagtct ttccatagag atgtccaaag gaccccagga ggaacctcca
     3421 gtcccttgct ctcaggaaga ggctggggca gctgtgcgga gcatctcaga agagaagagg
     3481 gctatcgagc caactctggg ccaggaaggc cctgagcctg tggctccttc cctggctaag
     3541 caggaagtgg agtgcacttc aggagatgct ggccctgtac cttgctccac ccaaggagag
     3601 ctgacccaga agaagccaag tattgaagcc tgccatgggg gagatctgga ctccgggctg
     3661 aaacttagat ctgagaaaga agatatgtca gagcttggag ttcacctggt gaattccctt
     3721 gtggatcaca gccgcaactc agacttatca gacatccagg aagaagagga agaggaggaa
     3781 gaagaggaag aggaactggg ttccaggcct tgttcctccc agaagcaggt tgctggcaac
     3841 agcatcaggg agaatggagc caagccccag ccagacccct tttgtgagac tgacagcgac
     3901 gaggagatct tggagcagat actggagttg cctctccagc ggctctgcag caagaagctg
     3961 ttcagcatcc ctgaggagga agaggaggag gaagaggagg aagggctgga gaaaccaggg
     4021 cccagccgca cttcccaaga ccctagccag cctgaacttg cgttgctagg gccgggctgt
     4081 gatagcagtc agccccaggg acctggcctg tgtcccttgt ctcctgagct ctctggggtc
     4141 agggagcacc tggaggatgt gctgggagtc gttggtggaa acggcaggag gagaggaggt
     4201 ggctccccgg agaaactccc aaaccgcaag cgacctcagg acccccgaga acattgcagc
     4261 cggcttcttg gcaatggcgg gccccaggcc tctgcacggc cggtccctcc acgggagagg
     4321 ggcagcctcc ctgtgattga gggcaccagg gttggacagg agcccggtgg gagagggcgg
     4381 ccgggtcttt cccggaggtg tccccgtggc cctgctccag aatccagctt agtcagctgc
     4441 ctctctccaa agtgtttgga gatcagtatt gaatatgatt ctgaggatga gcaggaggcg
     4501 ggcagcgggg gtgtcagcat caacagctcc tgctacccca cagatgggga ggcctggggc
     4561 acagcggcag taggaaggcc caggggacct ccgaaggtca atccaggccc caacgcctac
     4621 ctgcgcctcc cagcctggga gaaaggggag ccagagcgga gaggccgcag tgcgattggc
     4681 agaaccaagg agccaccctc ccgggcaaca gaaactgggg agtccagagg gcaggacaac
     4741 tctgggcgga gaggacccca gaggagaggg gcccgggtgc ctaggtctgg taccactgag
     4801 ctggcccctc caaggagccc ccaagaagca ccacctcatc aggacctgcc tgtgagggtc
     4861 tttgtggctc tgtttgacta tgaccctgta tcaatgtcac cgaaccctga tgccggagaa
     4921 gaggaactgc cctttaagga gggccaactc ctcaaggtgt ttggagacaa ggacgctgat
     4981 ggtttctacc ggggtgagag tgggggccgt acaggctaca tcccctgcaa catggtggct
     5041 gaggtggctg tggacagtcc agcagggaga caacagctgc tccagcgggg tttcttgccc
     5101 ccaaatgttc tcaccgaggc ctcaggaaat ggtccctctg tgtactcctc agcacacaca
     5161 cccgggcctc cccccaagcc tcgtcggtcc aagaaagtgg agctggaagg tcctacacag
     5221 ctctgtccag gtgagaagcc atctttgggc aagtgtctgg gaagaggtcc tcctaagctg
     5281 attcattctg ctgcccagaa aacctcccga cctatggtgg ctgcatttga ctataatcct
     5341 cgggagaact cccccaatat ggatgtggag gcagagctgc ccttcagagc aggggatgtc
     5401 attactgtgt ttgggaacat ggacgatgat ggtttctact atggggagct gaatggacaa
     5461 aggggcctgg ttccatccaa cttcctggaa ggccctgggc ctgagtcagg cagcctagag
     5521 tctgggacat ctcaagccga gagtcagaga acgaggagga gaagagtcca gtgctagatg
     5581 gagctagtgt agagacatga ccccagaatc accatacaag ggcctccagt gcccccaggc
     5641 tggcactgtg ccctcagctc tggaagttcc tccaggacca aactggggga gtcacagagc
     5701 atagctgaga agaagcaggg tctcctcgcc aaagcaaagg aacttctcaa aaggctgggc
     5761 tccaggaaag actgaggctg ccgtccgtct gtcctgcaga cagaagtggc cctggatcaa
     5821 ctcactggct ggacagggaa acccaactcc tgatctctga gcagactggc actcaaagga
     5881 gcccagggga cctggtgagg gtggggttac ctgcaccctt agtgaggagt cctctagatg
     5941 ggctcttcca gagggaactg agccccagag taagtaatca agcaccaagc actgtcagat
     6001 caggactgga cccacgcctc tggattccca gtctgttctc atctactcct gctttgctac
     6061 cacgctctgt aggtcccttc ttggccttcc ctgctccaag gataggccct gggtggagat
     6121 agggaccact ctaacgatgg ctctggctgt cctcccgatg gatcgtttgc actggactgt
     6181 cccctggggc gggggcagag ccatgtacat actcagtgta tatatgtcca tactcagtgc
     6241 atatatgtac atactcagtg tatatatgta catactcagt gcctcagtcc aggtcctccc
     6301 tctgcttcac cgcacaggcc aggggaggag aaaggccatg ccaaagcggg cctgaccccg
     6361 ccccatagtg ctccacccct ccctgcccag gccacctggc ctctgtgtga tcccatcctc
     6421 tcagacccag gggaccaggg ggcagaaagc aggagttggg tttgccttat tttgctcatt
     6481 ggattcaact tctctcttgc atcattttct tccagtccct gttgggtcca ggggctgagg
     6541 gaaaggacgg atttatgcag ctattttcat acattccctg ttcagagtgg gtaggggtgt
     6601 ctcccctcac tctaaccatc ccatccttca ccccttgtct gggcgagtct ctttgcatgt
     6661 tttcttcgct gtggtgggag atgtttgatt gaaccctcgc cccctaccct ggtctccagg
     6721 ggtgtgggat agtgggggca tttgtttaaa aagacatttt actataataa agtctatttt
     6781 cacaaaattg a
//
