LOCUS       NM_025982               1543 bp    mRNA    linear   ROD 23-APR-2024
DEFINITION  Mus musculus tetraspanin 31 (Tspan31), transcript variant 1, mRNA.
ACCESSION   NM_025982
VERSION     NM_025982.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Thompson,C.L., Ng,L., Menon,V., Martinez,S., Lee,C.K.,
            Glattfelder,K., Sunkin,S.M., Henry,A., Lau,C., Dang,C.,
            Garcia-Lopez,R., Martinez-Ferre,A., Pombero,A., Rubenstein,J.L.R.,
            Wakeman,W.B., Hohmann,J., Dee,N., Sodt,A.J., Young,R., Smith,K.,
            Nguyen,T.N., Kidney,J., Kuan,L., Jeromin,A., Kaykas,A., Miller,J.,
            Page,D., Orta,G., Bernard,A., Riley,Z., Smith,S., Wohnoutka,P.,
            Hawrylycz,M.J., Puelles,L. and Jones,A.R.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Garcia-Espana,A., Chung,P.J., Sarkar,I.N., Stiner,E., Sun,T.T. and
            Desalle,R.
  TITLE     Appearance of new tetraspanin genes during vertebrate evolution
  JOURNAL   Genomics 91 (4), 326-334 (2008)
   PUBMED   18291621
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC134329.3.
            
            On Oct 19, 2007 this sequence version replaced NM_025982.3.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK075962.1, AK012457.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-147               AC134329.3         14735-14881
            148-315             AC134329.3         15483-15650
            316-396             AC134329.3         16008-16088
            397-528             AC134329.3         16385-16516
            529-642             AC134329.3         16614-16727
            643-1543            AC134329.3         16806-17706
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 74.5 cM"
     gene            1..1543
                     /gene="Tspan31"
                     /gene_synonym="2700085A14Rik; Sas"
                     /note="tetraspanin 31"
                     /db_xref="GeneID:67125"
                     /db_xref="MGI:MGI:1914375"
     exon            1..147
                     /gene="Tspan31"
                     /gene_synonym="2700085A14Rik; Sas"
                     /inference="alignment:Splign:2.1.0"
     CDS             85..717
                     /gene="Tspan31"
                     /gene_synonym="2700085A14Rik; Sas"
                     /note="isoform a is encoded by transcript variant 1;
                     sarcoma amplified sequence; tspan-31; sarcoma-amplified
                     sequence homolog"
                     /codon_start=1
                     /product="tetraspanin-31 isoform a"
                     /protein_id="NP_080258.1"
                     /db_xref="CCDS:CCDS24227.1"
                     /db_xref="GeneID:67125"
                     /db_xref="MGI:MGI:1914375"
                     /translation="MVCGGFACSRNALCALNVVYMLVGFLLIGVAAWGKGLGVVSSIH
                     IIGGVIAVGVFLLLIAVAGLVGAANHHQVLLFFYMIILGLVFIFQFGISCSCLAINRN
                     TQADVINASWSVLSNSTRHELERSFDCCGLFNLTTLRLQDDTSCSAVCKTKSSTCQMC
                     GERFLKHSDKALKILGGVGLFFSFTEILGVWLAMRFRNQKDPRANPSAFL"
     exon            148..315
                     /gene="Tspan31"
                     /gene_synonym="2700085A14Rik; Sas"
                     /inference="alignment:Splign:2.1.0"
     exon            316..396
                     /gene="Tspan31"
                     /gene_synonym="2700085A14Rik; Sas"
                     /inference="alignment:Splign:2.1.0"
     exon            397..528
                     /gene="Tspan31"
                     /gene_synonym="2700085A14Rik; Sas"
                     /inference="alignment:Splign:2.1.0"
     exon            529..642
                     /gene="Tspan31"
                     /gene_synonym="2700085A14Rik; Sas"
                     /inference="alignment:Splign:2.1.0"
     exon            643..1543
                     /gene="Tspan31"
                     /gene_synonym="2700085A14Rik; Sas"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacgcggtt gggagtccta caagacggtc ctcgataccc tccccacaag tcttgggacc
       61 atttgggtcc ccagatctgg ggagatggtt tgcggcggat ttgcctgttc caggaatgcg
      121 ctgtgcgctc tcaacgtggt ttatatgctt gtgggctttt tgctcattgg cgtggctgcc
      181 tggggcaagg gcctcggtgt ggtgtctagc attcacatca ttggaggagt cattgctgtg
      241 ggagtcttcc ttctcctcat cgcggtggca ggactggtgg gcgccgcgaa ccaccatcaa
      301 gtgctgctct tcttttatat gatcatccta ggtttggtct tcatcttcca gtttggaatc
      361 tcttgctcat gtctggctat taacagaaac acacaggcag atgtcatcaa tgcttcgtgg
      421 tcggtcttga gcaacagtac ccggcatgaa ctggagagaa gttttgactg ctgtggcttg
      481 ttcaacctta caaccctgcg cctacaagat gatacttcct gtagtgcggt gtgcaaaact
      541 aagagctcta catgccagat gtgtggggag aggttcctta aacattcaga caaagccctc
      601 aagatcctag gaggtgttgg gctcttcttt agtttcacag agatccttgg tgtttggcta
      661 gcaatgagat tccggaatca aaaggaccct cgagccaacc ccagtgcctt cctatgagac
      721 ttttgacctc ccagatagca tctctgcagc ctaggctgtt tctagctagc tctgtatcca
      781 aggaagacct tgaattccag accctcctgc ctcagcctcc tgctggcatc accacactca
      841 gccagcccct ggatccttct gacttggctt tgccattttt ttgttttttg agacagggtt
      901 tctctgtatg gccctggctg tcctggaact gtgtaaacta ggctggcctc aaactcagaa
      961 atccacctgc ctctgcctcc caagtgctgg gattaaaggc gtacaccacc actgcctggc
     1021 cttgccatct ttacaaacac ctaggggtgg ccctatggtt ttgttttaga gaaaagaggt
     1081 cccttacctc acccccaaga actggtggtt ggacttatgt ctgttttgat gggaacacga
     1141 ttatggatga ggggaggtag gcctcgggcc ctaggagggt aactgcaccc cccccccaag
     1201 acccttggct tcaaggacag agtcagaaca ccaagagaaa accagttata acccagggcc
     1261 tcacaagtgc tcggcaagca tttctaccaa tcagttgtca ttcccagccc cacctacagt
     1321 ctcatcaaag caggaccagt gaacttagaa actaaagcca ttttgaccga atattcaaag
     1381 aaagcatttc tctctgatct tgccagccaa agagctggac tgcctgccta ggtccttgca
     1441 gggaacttgt tttcgtgttt tttttttgtt tgtttgtttt gttttcccca agtctcccag
     1501 tggcaaagcc aattggaaaa aacattaaag aaaaataaag acc
//
