LOCUS       NM_024445               2210 bp    mRNA    linear   ROD 06-AUG-2024
DEFINITION  Mus musculus translin-associated factor X (Tsnax) interacting
            protein 1 (Tsnaxip1), mRNA.
ACCESSION   NM_024445
VERSION     NM_024445.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Kaneda,Y., Miyata,H., Shimada,K., Oura,S. and Ikawa,M.
  TITLE     Testis-specific proteins, TSNAXIP1 and 1700010I14RIK, are important
            for sperm motility and male fertility in mice
  JOURNAL   Andrology 11 (5), 799-807 (2023)
   PUBMED   36598146
  REMARK    GeneRIF: Testis-specific proteins, TSNAXIP1 and 1700010I14RIK, are
            important for sperm motility and male fertility in mice.
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   McClintock,T.S., Glasser,C.E., Bose,S.C. and Bergman,D.A.
  TITLE     Tissue expression patterns identify mouse cilia genes
  JOURNAL   Physiol Genomics 32 (2), 198-206 (2008)
   PUBMED   17971504
  REMARK    GeneRIF: Tsnaxip1 is most abundantly expressed in tissues rich in
            highly ciliated cells, such as olfactory sensory neurons, and is
            predicted to be important to cilia.
REFERENCE   3  (bases 1 to 2210)
  AUTHORS   Keegan,C.E., Hutz,J.E., Else,T., Adamska,M., Shah,S.P., Kent,A.E.,
            Howes,J.M., Beamer,W.G. and Hammer,G.D.
  TITLE     Urogenital and caudal dysgenesis in adrenocortical dysplasia (acd)
            mice is caused by a splicing mutation in a novel telomeric
            regulator
  JOURNAL   Hum Mol Genet 14 (1), 113-123 (2005)
   PUBMED   15537664
REFERENCE   4  (bases 1 to 2210)
  AUTHORS   Bray,J.D., Chennathukuzhi,V.M. and Hecht,N.B.
  TITLE     Identification and characterization of cDNAs encoding four novel
            proteins that interact with translin associated factor-X
  JOURNAL   Genomics 79 (6), 799-808 (2002)
   PUBMED   12036294
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC152826.2 and
            AC116569.6.
            
            On Apr 30, 2007 this sequence version replaced NM_024445.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006041.1, AF343750.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN00849387
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-84                AC152826.2         6267-6350           c
            85-166              AC152826.2         554-635             c
            167-279             AC116569.6         103544-103656
            280-406             AC116569.6         103804-103930
            407-500             AC116569.6         105105-105198
            501-697             AC116569.6         106389-106585
            698-833             AC116569.6         106956-107091
            834-1003            AC116569.6         107792-107961
            1004-1163           AC116569.6         108044-108203
            1164-1294           AC116569.6         108280-108410
            1295-1420           AC116569.6         108530-108655
            1421-1573           AC116569.6         108795-108947
            1574-1683           AC116569.6         109071-109180
            1684-1810           AC116569.6         110289-110415
            1811-1917           AC116569.6         110509-110615
            1918-2210           AC116569.6         110782-111074
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 53.04 cM"
     gene            1..2210
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /note="translin-associated factor X (Tsnax) interacting
                     protein 1"
                     /db_xref="GeneID:72236"
                     /db_xref="MGI:MGI:1919486"
     exon            1..84
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..2158
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /note="trax-interacting protein 1"
                     /codon_start=1
                     /product="translin-associated factor X-interacting protein
                     1"
                     /protein_id="NP_077765.1"
                     /db_xref="CCDS:CCDS22614.1"
                     /db_xref="GeneID:72236"
                     /db_xref="MGI:MGI:1919486"
                     /translation="MANLQERKSFSKPRISIQASGGTPEAKGIEKRKLSQKRRTLPLQ
                     LSLGGHLSPWPTYTSGQTVLHNRKPCSDDSRNRANSCQQQSMSISKPKYLEQLENYLR
                     KELLLLDLSTDSAQELRLQPYREIFEFFIEDFKTYKPLLSSIKNAYEVMLAHQKERIR
                     SLEPLKAKIVTMNEDCSERVLAMRAEERYEISVLKKEKMNLLKLIDKKNEEKISLQSE
                     VAKLRRSLAEEYLRYLTERDARKILIGDLNELRYQQEDMSLAQTPGVWGEDPVKLTLA
                     LKMTRQDLTRTQMELNTMKANSGDVVPRRDLEMQEKTNMELQEQLESLKADYEEVQKE
                     HELLLQLHMSTLKERDQFYNELQEIQRTSTPRPDWTKCESIIAGGPERWLVLAEGKNS
                     DQLVDVLLEEIGMGLLREKDFFPGLGFGDAIPPFLRFDGPVKNKKPSKKEVVNLLKDA
                     WKERIAEEQKEPFPDFFFNFLERRFGVNDAMAWAYTIFENIKLFRSSEIMNQFYAVLM
                     GKNLESVYINQKKTLSHLLKELLSVDTQNEGSITMEQFSTILKTTFPLKKEEQIQELM
                     EAVGWGPDSSNTDMLNYRSLFNEDEEGQSEPFVQRLWEQYESDKEAYLEELKQELDLD
                     PLEDVTLLKMRGTLMNIDPTMDKQTLSAYLSQAYQIPAIDVPLEDEEKQGIISIKVET
                     ALDRLRMADTKRVGPREPDPAS"
     exon            85..166
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            167..279
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            280..406
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            407..500
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            501..697
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            698..833
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            834..1003
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1163
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            1164..1294
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            1295..1420
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            1421..1573
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            1574..1683
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            1684..1810
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            1811..1917
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
     exon            1918..2210
                     /gene="Tsnaxip1"
                     /gene_synonym="1700016K08Rik; TXI1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtacactacc gcaacggctc aatcctgcat ctgctccaaa gtcatggcca acctacagga
       61 gcgtaaaagt ttctccaagc caagaataag tatacaagct tcaggaggga ctccggaagc
      121 caagggcatt gagaaacgca agctttctca gaaacgaagg acactgccct tgcagttatc
      181 cttgggtggc cacctgtcac catggcctac atacaccagt ggccagacag ttctacataa
      241 tcgaaagccc tgttcagatg acagccggaa tcgagccaat agctgccagc agcagtccat
      301 gagcatctcc aagcccaagt acctggagca actagaaaac tacctgcgca aggaactcct
      361 cctgctggac ctgagcacgg attctgcaca ggaactgagg ctgcagcctt atagggagat
      421 ctttgagttc ttcatagagg atttcaagac atacaagcca ctgttatcct ccatcaagaa
      481 tgcgtacgag gtgatgctag cccaccaaaa ggagagaatc cggtccctgg agcccctgaa
      541 ggccaagatt gtcaccatga acgaggactg cagtgagagg gtcctggcca tgagggctga
      601 ggagaggtac gaaatctctg tgctcaagaa agagaagatg aatttgctaa aactcatcga
      661 caaaaagaac gaagagaaga tctcactgca gagcgaggta gctaaactga ggaggagcct
      721 ggctgaggag tatctgcgtt atcttaccga acgagatgcc cgcaaaattc tgattgggga
      781 cctgaatgaa ctgaggtacc agcaagaaga catgtcacta gcccagaccc caggtgtttg
      841 gggagaagac ccagtgaagc taacattggc actgaagatg actcgacaag acctgactcg
      901 cacacagatg gaacttaaca caatgaaagc caactctgga gatgtggtac ccaggagaga
      961 cttggaaatg caagagaaga ccaacatgga gcttcaagag cagctagaaa gcctgaaagc
     1021 cgactatgaa gaagtccaaa aggaacacga gctgctgctg cagttgcaca tgagcacact
     1081 aaaggagcgg gaccagttct ataatgagtt gcaggagatc cagcgcacct ccacaccgcg
     1141 acctgactgg accaaatgcg aaagtatcat agcagggggc ccagagcgct ggctagtgct
     1201 ggctgaagga aagaacagtg atcagctggt ggatgtgctc ctggaggaaa tcggcatggg
     1261 tctgcttcgg gagaaagact tcttccctgg cctgggcttt ggggatgcca tccccccctt
     1321 ccttcggttt gatggccctg tgaagaacaa gaagccaagc aagaaggagg tggtaaacct
     1381 ccttaaggat gcctggaagg aacgcattgc agaggaacag aaggagccat ttccagattt
     1441 cttcttcaat tttctggagc gtcgctttgg ggtcaatgat gccatggcct gggcttacac
     1501 catttttgaa aatatcaagc tctttcgttc cagtgagatc atgaatcagt tctatgcagt
     1561 attgatggga aagaatttgg agagtgtata tatcaatcaa aaaaagacac tgtcccatct
     1621 gctgaaggag ttgctaagtg ttgacactca gaatgaggga tcaatcacca tggaacagtt
     1681 cagcaccatc ctcaagacca cctttcctct caagaaggaa gagcagattc aggagctgat
     1741 ggaggcagta ggctggggtc cagacagcag caacacagac atgttaaact accgatcttt
     1801 gtttaatgag gatgaggaag ggcagagtga gccatttgtg cagaggctgt gggaacagta
     1861 tgaaagtgac aaggaagcat acttagagga actgaagcag gagctagacc tggatcctct
     1921 tgaagacgtg accctactga agatgcgtgg gaccctgatg aacatagatc ctaccatgga
     1981 caagcagact ctgagtgcct acctgagcca ggcctatcag atccctgcaa ttgatgtgcc
     2041 actggaggat gaggagaagc aggggataat ctccataaag gttgagactg cacttgatcg
     2101 acttaggatg gcagacacga agcgtgtagg accacgagag ccagacccag caagctagag
     2161 ccagccctgc ccccctggca acagaaatac aatatcgcta actttcttct
//
