LOCUS       NM_001363022            6616 bp    mRNA    linear   ROD 16-OCT-2024
DEFINITION  Mus musculus teashirt zinc finger family member 2 (Tshz2),
            transcript variant 1, mRNA.
ACCESSION   NM_001363022 XM_017317966
VERSION     NM_001363022.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6616)
  AUTHORS   Kc,R., Lopez de Boer,R., Lin,M., Vagnozzi,A.N., Jeannotte,L. and
            Philippidou,P.
  TITLE     Multimodal Hox5 activity generates motor neuron diversity
  JOURNAL   Commun Biol 7 (1), 1166 (2024)
   PUBMED   39289460
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6616)
  AUTHORS   Soussi,G., Girdziusaite,A., Jhanwar,S., Palacio,V., Notaro,M.,
            Sheth,R., Zeller,R. and Zuniga,A.
  TITLE     TBX3 is essential for establishment of the posterior boundary of
            anterior genes and upregulation of posterior genes together with
            HAND2 during the onset of limb bud development
  JOURNAL   Development 151 (11) (2024)
   PUBMED   38828908
REFERENCE   3  (bases 1 to 6616)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   4  (bases 1 to 6616)
  AUTHORS   Ahuja,N., Hiltabidle,M.S., Rajasekhar,H., Voss,S., Lu,S.Z.,
            Barlow,H.R., Cowdin,M.A., Daniel,E., Vaddaraju,V., Anandakumar,T.,
            Black,E., Cleaver,O. and Maynard,C.
  TITLE     Endothelial Cyp26b1 restrains murine heart valve growth during
            development
  JOURNAL   Dev Biol 486, 81-95 (2022)
   PUBMED   35364055
REFERENCE   5  (bases 1 to 6616)
  AUTHORS   Su-Feher,L., Rubin,A.N., Silberberg,S.N., Catta-Preta,R., Lim,K.J.,
            Ypsilanti,A.R., Zdilar,I., McGinnis,C.S., McKinsey,G.L.,
            Rubino,T.E. Jr., Hawrylycz,M.J., Thompson,C., Gartner,Z.J.,
            Puelles,L., Zeng,H., Rubenstein,J.L.R. and Nord,A.S.
  TITLE     Single cell enhancer activity distinguishes GABAergic and
            cholinergic lineages in embryonic mouse basal ganglia
  JOURNAL   Proc Natl Acad Sci U S A 119 (15), e2108760119 (2022)
   PUBMED   35377797
REFERENCE   6  (bases 1 to 6616)
  AUTHORS   Sharov,A.A., Piao,Y., Matoba,R., Dudekula,D.B., Qian,Y.,
            VanBuren,V., Falco,G., Martin,P.R., Stagg,C.A., Bassey,U.C.,
            Wang,Y., Carter,M.G., Hamatani,T., Aiba,K., Akutsu,H., Sharova,L.,
            Tanaka,T.S., Kimber,W.L., Yoshikawa,T., Jaradat,S.A., Pantano,S.,
            Nagaraja,R., Boheler,K.R., Taub,D., Hodes,R.J., Longo,D.L.,
            Schlessinger,D., Keller,J., Klotz,E., Kelsoe,G., Umezawa,A.,
            Vescovi,A.L., Rossant,J., Kunath,T., Hogan,B.L., Curci,A.,
            D'Urso,M., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
REFERENCE   7  (bases 1 to 6616)
  AUTHORS   Horie,K., Yusa,K., Yae,K., Odajima,J., Fischer,S.E., Keng,V.W.,
            Hayakawa,T., Mizuno,S., Kondoh,G., Ijiri,T., Matsuda,Y.,
            Plasterk,R.H. and Takeda,J.
  TITLE     Characterization of Sleeping Beauty transposition and its
            application to genetic screening in mice
  JOURNAL   Mol Cell Biol 23 (24), 9189-9207 (2003)
   PUBMED   14645530
REFERENCE   8  (bases 1 to 6616)
  AUTHORS   Ewart-Toland,A., Briassouli,P., de Koning,J.P., Mao,J.H., Yuan,J.,
            Chan,F., MacCarthy-Morrogh,L., Ponder,B.A., Nagase,H., Burn,J.,
            Ball,S., Almeida,M., Linardopoulos,S. and Balmain,A.
  TITLE     Identification of Stk6/STK15 as a candidate low-penetrance
            tumor-susceptibility gene in mouse and human
  JOURNAL   Nat Genet 34 (4), 403-412 (2003)
   PUBMED   12881723
REFERENCE   9  (bases 1 to 6616)
  AUTHORS   Long,Q., Park,B.K. and Ekker,M.
  TITLE     Expression and regulation of mouse Mtsh1 during limb and branchial
            arch development
  JOURNAL   Dev Dyn 222 (2), 308-312 (2001)
   PUBMED   11668608
REFERENCE   10 (bases 1 to 6616)
  AUTHORS   Caubit,X., Core,N., Boned,A., Kerridge,S., Djabali,M. and Fasano,L.
  TITLE     Vertebrate orthologues of the Drosophila region-specific patterning
            gene teashirt
  JOURNAL   Mech Dev 91 (1-2), 445-448 (2000)
   PUBMED   10704881
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL731826.12 and AL731822.31.
            
            On Jan 13, 2022 this sequence version replaced NM_001363022.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (a). Variants 1, 2, and 3
            all encode the same isoform (a).
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660825.144525.1,
                                           SRR17784643.316505.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1072              AL731826.12        174238-175309
            1073-4133           AL731822.31        11097-14157
            4134-6616           AL731822.31        197839-200321
FEATURES             Location/Qualifiers
     source          1..6616
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 89.47 cM"
     gene            1..6616
                     /gene="Tshz2"
                     /gene_synonym="2900073F20Rik; B830045G17; mKIAA4248;
                     Mtsh2; Sdccag33l; teashirt2; Tsh2; Zfp218"
                     /note="teashirt zinc finger family member 2"
                     /db_xref="GeneID:228911"
                     /db_xref="MGI:MGI:2153084"
     exon            1..1072
                     /gene="Tshz2"
                     /gene_synonym="2900073F20Rik; B830045G17; mKIAA4248;
                     Mtsh2; Sdccag33l; teashirt2; Tsh2; Zfp218"
                     /inference="alignment:Splign:2.1.0"
     exon            1073..4133
                     /gene="Tshz2"
                     /gene_synonym="2900073F20Rik; B830045G17; mKIAA4248;
                     Mtsh2; Sdccag33l; teashirt2; Tsh2; Zfp218"
                     /inference="alignment:Splign:2.1.0"
     exon            4134..6616
                     /gene="Tshz2"
                     /gene_synonym="2900073F20Rik; B830045G17; mKIAA4248;
                     Mtsh2; Sdccag33l; teashirt2; Tsh2; Zfp218"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5509..5514
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tshz2"
                     /gene_synonym="2900073F20Rik; B830045G17; mKIAA4248;
                     Mtsh2; Sdccag33l; teashirt2; Tsh2; Zfp218"
                     /note="hexamer: GATAAA"
     polyA_site      5532
                     /gene="Tshz2"
                     /gene_synonym="2900073F20Rik; B830045G17; mKIAA4248;
                     Mtsh2; Sdccag33l; teashirt2; Tsh2; Zfp218"
                     /note="major polyA site"
ORIGIN      
        1 agtttgttca gccgggatcg atgtttgctg gcatcgcctc gccctgtctt gtgtgtgtgt
       61 gagtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtaagagaga
      121 gcatatgtgg ggagtgtgag tgtaagtgtg tgtgtgtgtg tgtgtgtgtg tgtaagcgag
      181 agtgcttgtg tgtgagagcg agcgtgcgtg tgcgtatgtg tggtgtgtgt gtgtgtgtgt
      241 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgagtga attccagatt ttctgtcttt
      301 cccaaacccg ctcctgtcct ctcgcatatc actcacagac ggggatctga cagcaacaac
      361 aaacctacag tgagtgatct ctccccagcg cgaatccgcc atcaagatca gggaagagga
      421 ggaggaggaa gaagaggaag aggaggagga agaggaggag gaggaggagg agaaggagga
      481 gaaggagaag gaggagaagg aggaggtggt aaaggaagag gaggtggagg aagaggagga
      541 agaagaggag gagggaaaga gaaggaagaa gaaaaagaag aaatccactg tcttcccggg
      601 attgtttccc cccttatctt taagcgcgag tgtgcgcgtg gcgcgtgtgc gcccctcatc
      661 cctgccatct gaaccccgtc ttggatgttt aataaagaaa tcaagtgtct caccagtcac
      721 caaaaaaaca gcaaaaagca aaaccaaaaa aagaaaaaaa tccaaaagca aaacaaaaag
      781 agagggggaa aaaaaaccaa acaaacaaac aaggcagaac caacctccac ttgcaagcag
      841 caggcgcgag ccacatatct gccacccaga gagggggtct ccggccccgc gctggagcgc
      901 tggcaggggg atcttcaggg ggacagaggc cgagtgacgt cctaggagcc acagaaagac
      961 gagcgagact gcggcccccg cgcgcggctc ggggctgggg cgccagaagt gagactggag
     1021 ctaagtagag cgatgccaag gaggaaacag caggcaccca agcgggcggc agggtatgcc
     1081 caggaggaag tcctgaagga agaggaggaa ataaaggaag aggaggagga agaagaagac
     1141 agtggctccg ttgctcaaca ccagagcagc aatgacactg ggacagacga ggaactagaa
     1201 acgggcccag agcagaaagg ctacttcagc tgccagaact caccggggag ccacctgtcc
     1261 aatcaggatg cagaaaacga gtctctcctg agcgatgcca gcgaccaggt gtcagacgtc
     1321 aaaagtgtct gtggccgaga tgtttcagac aagaaagcaa acactcaccc caaacttcca
     1381 agcgaacccc ataactgcat ggataaaatg acagctgtct atgccaatat cctgtcagat
     1441 tcctactggt cgggcctggg cctcggcttc aagttatcca acagtgagag acggaattgc
     1501 gacacccgca acagcagcgg caagaatgat tttgattggc accaagatgc cctgtccaaa
     1561 agcctgcagc agaacttgcc ttcccggtct gtctctaagc ccagcctatt cagctccgtg
     1621 cagctatacc ggcagagcag taagttgtgt ggctcggtgt tcaccggcgc cagcaggttc
     1681 cgctgcaggc agtgcagtgc ggcctacgac actctcgtgg agctgaccgt gcacatgaac
     1741 gagacaggcc actatcaaga tgacaaccgc aaaaaagata agctcagacc cacgagctac
     1801 tccaagcccc gaaaaagggc cttccaagac atggacaaag aggatgccca aaaggtcctg
     1861 aaatgtatgt tttgtggtga ctccttcgat tccctgcaag atttgagtgt ccacatgata
     1921 aagacaaaac attaccaaaa agtgcctttg aaggagccgg taccaaccat ttcctccaag
     1981 atggtcacac cagccaagaa gcgtgttttc gatgtcaaca ggccttgctc ccctgactcc
     2041 accacagggt cccttgcaga ttccttttct tcccagaaga gtgctaacct gcagctgccc
     2101 tccaacagcc gctacggcta ccaaaacggc gccagctaca cctggcagtt cgaggcctgc
     2161 aagtcccaga tcttaaagtg tatggagtgt ggcagttccc atgatacttt gcaacaactc
     2221 accacccaca tgatggtcac aggccacttt ctcaaagtca ctagctctgc ctccaagaaa
     2281 ggaaagcaac ttgtgttgga ccccctagct gtggagaaaa tgcagtcact gtctgagacc
     2341 ccaaacagtg agtctctggc ccctaagcca tcaagtaact ccccctcgga gtgcacagcc
     2401 tctaccaccg agttaaagaa agaaagcaag aaggagaagg gagagggcat tgaagacgaa
     2461 caaggtgtga aaagcgagga ctacgaagac tctctacaga aacctctcga ccccaccata
     2521 aaataccagt acctaagaga ggaggacttg gaagacggct cgaagggtgg tggggacatt
     2581 ttaaagtcac tggaaaatac cgtaaccaca gccatcaaca aggcccagaa tggtgctccc
     2641 agctggagcg catacccaag tatccacgca gcctaccagc tctcagaggg caccaagcca
     2701 cctatggcaa tgggctctca gatactgcaa atccgaccca acctcgccaa caagctgagg
     2761 cccattgcac ccaaatggaa aggtatgcca ctcggccctg tccccacaag cctggctctg
     2821 tacactcaag tcaagaagga gacagaagac aaagatgaag tcgtgaagca gtgtgggaag
     2881 gaaagtcccc acgaagaggc aacatctttc agtcagcctg agggcgagtc tttctccaaa
     2941 attgaaccac cttcagaatc cagaaaggct gagccctgtc ccctgaaaga ggaggagaag
     3001 ccgcagaaag agaaaccgga gcccttagaa ccagtatctt ctctgaccaa tggctgtgcg
     3061 ccggctaacc acaccccggc tctgccttcc atcaacccgc tcagtgccct gcagtccgtc
     3121 ctgaacaacc acctgggcaa agccacggag cccttgcgct ccccttcctg ctccagtccc
     3181 aactcaagca caagccccgt gttccataaa tccagcctcc acgtggtgga caagccggtc
     3241 ataagtccca cctccaccag gccggcggcc agcgtggcca gacactacct gtttgagaac
     3301 accgaccagc ccattgacct gaccaagtcc aaaagcaaga gagccgagtc ctcgcaagca
     3361 caatcctgca cgtccccacc tcagaagcat gctctgtgtg acattgctga tatggtcaag
     3421 gtcctcccca aagccaccac cccaaagcca gccgcctcct cgagggtccc tcctatgaag
     3481 ctggaaatcg acgtcagacg cttcgaggat gtttcgagcg aagtctccac tttgcacaaa
     3541 aggaaaggcc ggcagtccaa ctggaacccc cagcatcttc tcatcctgca agctcagttt
     3601 gcctcgagcc tcttccagac ctcagagggc aaatacctgc tttctgacct gggcccccaa
     3661 gagcggatgc aaatctccaa gttcaccgga ctctccatga ccacaatcag ccactggctg
     3721 gctaacgtca aataccagct taggaaaaca ggtgggacaa agttcctgaa aaacatggac
     3781 aaagggcacc ccatctttta ctgcagtgac tgtgcgtccc agttcagaac cccctctacc
     3841 tacatcagcc acctagagtc tcacctgggc ttccaaatga aggacatgac ccggatggcg
     3901 gctgaccagc aaagcaaggt ggagcaggag atctcccgag tgtcgtcggc tcagaggtct
     3961 ccagaaacaa tagctggcga agaggacaca gactctaaat tcaagtgtaa gttatgccgt
     4021 cggacatttg tgagcaaaca cgcagtaaaa ctccacctaa gcaaaacgca cagcaagtca
     4081 cccgaacacc actctcagtt tgtagcagac gtggatgaag aatagttctg caggacaatg
     4141 ccttagcctg gatcttcctt ccagattgga tctccctctc tcagcgcttc ttcttctttg
     4201 ctgcatcctt gcttctgact ttggactcag tgatgacctc ctcctgatcc ctgactctac
     4261 gaagactgcc aaaaagaaaa aaaaaaaaaa aagaaaaggg gggaaaaaaa gaaaaggaaa
     4321 agaaaaaaat cccaccaacc atttctcttc atcctcacta acaatttggt aatgaagtat
     4381 tgatttccac ttctctcctt atggacgata ttagattttc attgataaac tgcaagggga
     4441 ctgtcgcatc tccgagggcc tcttttcact gtccgaaaga aacaaagtgc cactgaagaa
     4501 aactaatgac tgggagtgtc gcagtccttc tcttctctgt ttgtaacagg aaggggaggg
     4561 ggccaatcac tcttcctagt ttaatgtcgg agtgggctgc tcttgggagc gagcttctcg
     4621 cggtaacagc catttcctat ttataacccc cctgggaaag tttgtctaaa ggaaatgttt
     4681 ctgttcagtg taacaattaa ggttgcacct ggcttgccta gtcctgcccc tgcaccaggg
     4741 agccattcat cacagcagag tggaggagtt ataaagttaa accagagttt gagccaagaa
     4801 aacctcccga ccatgttcat cttctgggaa agttgttggg ataggcaggc ttaaccatgt
     4861 ggatgccaaa ggctttgtcc tgtgcatgct cgctcggtga ggttatactg ggcagtctgt
     4921 aagcttagtt cccagcatgc acacggtcag acgaccgtgg ccacagggag ggtgcagagc
     4981 agaacctgag agactctacg agagcaagaa gagggaaagc ggccaacttc gctggcagtc
     5041 tcttcctgca ggacctgttg cctctcaaac gcaacttctc ctcctaacca gcagaatgca
     5101 tgaaaacagg gtgtccgttt taaacgcatt cctgcaactt ttttcattaa aactttaagg
     5161 gcccaatttt aatttgtgga atattcccgt taataatgag atctaattaa gacatccatt
     5221 aaaagcccgt taaagttaat ttaacgtaaa aattccaata gaactgtatt agattttctc
     5281 cattaaatta acgttatgga tttttaacgg atgtcttaat tacacgttat tattaacggg
     5341 aatactgtat tacacagatt aaaatcaggt cctaagtcaa cttggaaaag ctgagagcat
     5401 gttttaatat taaagtctcg cagacctagt acacagtttg gaaatgcagg ggaagatggg
     5461 tttcttctag ctgagcattc tctgtacaat ggagagtaac ctataataga taaagccatc
     5521 attttattta aataatgagt ctctttattc tcataggaca acaaagtctg gatcgtattg
     5581 taaattgcta ctcatctata ggtgaaatat ttaaactatc tcagcacaac actctgaaac
     5641 aaacgaccat tttgcattat tgctttaatt accaaggtta tcacaaaaaa aaaaactgac
     5701 aaaatgaagc caaatatatc cttttcacca tttatcatag aggatgtctg ttggaaatgt
     5761 cttggaaatt ttgacatgat ccctaaattc aaccctggga tttaaaataa aatttgaagg
     5821 ggaaaaaaaa aacttattta cctcctaagg aaagcgttac ccttatgcca catataatag
     5881 caaattgctt tttttttatg gtatgcataa cctagatggg gaaaaatatg gtgcttcagg
     5941 gaaggagggg aaagtaaatg aagttccagg aatgtcattc tgaagtaatg aggcatggac
     6001 ggaaaatata cccctcacat catcggattg agatggcagt cgaaatagct tcattgaagt
     6061 gtcagcgccc atccatccat caatcaccca caaggaaaaa taacaacagt acaacgggac
     6121 cgcttttatg ggatttactc acgggcacag ggaacagcgg ctcagaggta gttctgacat
     6181 gaaaagcaag gtgctgatat tattttttat gatgggagga tcgtaaagtg aattgagaac
     6241 agagaggtct gtctttgctt aacctgttca accagaaatg aacggaactc agctggaaag
     6301 ggaaccatct tcagatgcgt taagattgaa gggtggactc gactgagcgc tgtccttcaa
     6361 cagcgagact ctattaaaag ggagggggga ataatacatt agcatggggt gggggttcta
     6421 gaagctgata aaaatcgcct gttccaaccc ggggttatta ggaaagctac ataattcaga
     6481 tcctctgaaa cccaccaaac gcaaactcag acctcccgat ctgcctggga ggatgcaatg
     6541 cgctgctgga ctcctgggta atcattttcc tcctaagaca aaaataagaa taaatgcgct
     6601 gcttcgcata taatct
//
