LOCUS       NM_001373978            1708 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus testis specific 10 interacting protein (Tsga10ip),
            mRNA.
ACCESSION   NM_001373978 XM_003085377
VERSION     NM_001373978.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122861.4.
            
            On Oct 28, 2019 this sequence version replaced XM_003085377.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.153391.1,
                                           SRR5189670.10488.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-175               AC122861.4         136837-137011       c
            176-315             AC122861.4         135525-135664       c
            316-1019            AC122861.4         134739-135442       c
            1020-1167           AC122861.4         134418-134565       c
            1168-1338           AC122861.4         128788-128958       c
            1339-1438           AC122861.4         125419-125518       c
            1439-1557           AC122861.4         125114-125232       c
            1558-1708           AC122861.4         124552-124702       c
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 4.31 cM"
     gene            1..1708
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /note="testis specific 10 interacting protein"
                     /db_xref="GeneID:78306"
                     /db_xref="MGI:MGI:1925556"
     exon            1..175
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..1693
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /codon_start=1
                     /product="testis-specific protein 10-interacting protein"
                     /protein_id="NP_001360907.1"
                     /db_xref="GeneID:78306"
                     /db_xref="MGI:MGI:1925556"
                     /translation="MLNTDQLLVRALSERPRQSTEPLVPGTSTGLFRLLSSISPEDQR
                     CLGSGDSLQSQSCQLQRSYSAGQTTKKERKARRRNKKGRGSAEAEDLFSPPSRKPSFP
                     FQWAWESFIIDGQALFQSSSSMAMGHRPLLLPPAAPQCKSRHKSVANLSEDLRACHKM
                     EEQSVGRRHHLGGWANFPLPLSKVESQGLDQPSFWLSGKGSGSESEDVLEIEGQNSEE
                     AEKSLSSGELPQLPGQSLILEEELISEAMEEEHSDPHKGKGSSVNKGGNSGEKGSEEG
                     ELQSHNQGSSSSFNSLRKPQKGISRAKDLKGPWDLERLHRQLQEELECGPQKQTWKAL
                     RAAVQASARNKKTPILGDDESFLSANFPNRTFHKRQEATRNLLRAWEQQQVKERQQAE
                     VRRAREQQVQQQVARCLAAYTSGGNRGTLAPQRKLEELRRKERQRFAEYQAELQGIQH
                     RVQARPFLFQQAMQTNARLTANRRFSQVLSALGVDEDQLLAEAGNAESTPRKHRSNRS
                     LRAEMEPSSQSPPKTEPTSSQPGRRPSPTLDPDYSPREKN"
     exon            176..315
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /inference="alignment:Splign:2.1.0"
     exon            316..1019
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /inference="alignment:Splign:2.1.0"
     exon            1020..1167
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1338
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /inference="alignment:Splign:2.1.0"
     exon            1339..1438
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /inference="alignment:Splign:2.1.0"
     exon            1439..1557
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /inference="alignment:Splign:2.1.0"
     exon            1558..1708
                     /gene="Tsga10ip"
                     /gene_synonym="1810013N20Rik; Fam161c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agttccagag ctggcaggta ggggtgggag agggcaacat gccaatatgc taaacactga
       61 ccaactgttg gttagggcct tatcggagag accaaggcag agtacagagc ccttggttcc
      121 agggacatct acagggctgt tcagacttct atcaagcatc tctccggagg accagaggtg
      181 ccttgggagt ggtgacagtc tccagagtca gagctgccag ctacaaagat cttacagcgc
      241 agggcagaca acaaagaaag agcgaaaggc ccggaggcgg aacaagaaag gccgtggctc
      301 agctgaggca gaggatctct tcagtccacc ttctcgaaag ccttccttcc ctttccagtg
      361 ggcctgggag agcttcatca tagatggcca ggctctgttt cagtcaagtt cctctatggc
      421 catgggccat cgacccctgc tcctccctcc agcagccccc cagtgcaagt ccaggcacaa
      481 gtcagtagcc aacctctcag aagaccttcg agcctgccac aagatggaag agcaaagcgt
      541 ggggaggaga catcacctag ggggctgggc caactttccc ctgcctctga gcaaagtgga
      601 gagtcaaggg ctagatcaac ctagcttctg gttatcaggg aaagggtcag gatcagagtc
      661 tgaggatgtc ttagagatag aaggccagaa ttctgaagag gctgagaaaa gtctcagctc
      721 tggggaactg cctcagctcc cagggcagag cttgatcttg gaggaggaat tgatatcaga
      781 ggcgatggag gaggaacaca gcgaccccca caagggaaag ggcagttctg tcaataaggg
      841 ggggaattct ggagagaagg gctcagaaga gggggagctg cagagccaca accagggaag
      901 cagctctagc ttcaacagtc tccgaaagcc acagaagggg atctcaaggg ccaaggacct
      961 gaaggggccc tgggacctgg agcggctaca caggcagtta caggaagaac tggaatgtgg
     1021 tccccagaag cagacctgga aggcgctgcg ggcagctgtc caggcctctg ccaggaacaa
     1081 gaagaccccc atcttgggag atgatgaaag tttcttgtct gccaacttcc ctaatcgtac
     1141 tttccataaa cgacaggaag ccaccaggaa cctgctccgg gcctgggaac agcagcaggt
     1201 gaaggagagg cagcaggccg aggtgcgcag agcccgggag cagcaggtgc agcagcaggt
     1261 ggctcgctgc ctggcagcct acacatccgg agggaacaga gggaccctgg cacctcagcg
     1321 caaactagag gagctaaggc gcaaggagcg acagcgtttt gctgagtacc aagcagagct
     1381 ccaaggtatc cagcataggg tgcaggcccg gcccttcctg ttccagcagg ccatgcagac
     1441 caacgccaga ctcactgcaa atcggcgctt ctcccaggtg ctgtcagcac tgggggtaga
     1501 cgaggaccag ctgctggccg aggcaggcaa tgctgagagc accccccgga agcacaggag
     1561 caaccgatca cttagagcag aaatggagcc ctcttctcag agccccccca aaacagagcc
     1621 aaccagcagc cagcctggaa gacgcccctc cccaaccctg gacccagact acagtccccg
     1681 agagaaaaat taaacgcttt atggccaa
//
