LOCUS       NM_001001177            1900 bp    mRNA    linear   ROD 27-SEP-2022
DEFINITION  Mus musculus testis expressed basic protein 1 (Tsbp1), transcript
            variant 1, mRNA.
ACCESSION   NM_001001177
VERSION     NM_001001177.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Miyata H, Castaneda JM, Fujihara Y, Yu Z, Archambeault DR, Isotani
            A, Kiyozumi D, Kriseman ML, Mashiko D, Matsumura T, Matzuk RM, Mori
            M, Noda T, Oji A, Okabe M, Prunskaite-Hyyrylainen R, Ramirez-Solis
            R, Satouh Y, Zhang Q, Ikawa M and Matzuk MM.
  TITLE     Genome engineering uncovers 54 evolutionarily conserved and
            testis-enriched genes that are not required for male fertility in
            mice
  JOURNAL   Proc Natl Acad Sci U S A 113 (28), 7704-7710 (2016)
   PUBMED   27357688
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Stammers M, Rowen L, Rhodes D, Trowsdale J and Beck S.
  TITLE     BTL-II: a polymorphic locus with homology to the butyrophilin gene
            family, located at the border of the major histocompatibility
            complex class II and class III regions in human and mouse
  JOURNAL   Immunogenetics 51 (4-5), 373-382 (2000)
   PUBMED   10803852
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CR974457.17, AK077077.1, CT009767.6 and BY454825.1.
            
            On Aug 6, 2009 this sequence version replaced NM_001001177.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK077077.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-34                CR974457.17        78886-78919
            35-883              AK077077.1         22-870
            884-884             CT009767.6         5756-5756
            885-1890            AK077077.1         872-1877
            1891-1900           BY454825.1         430-439
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 18.0 cM"
     gene            1..1900
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /note="testis expressed basic protein 1"
                     /db_xref="GeneID:407788"
                     /db_xref="MGI:MGI:3039565"
     exon            1..34
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            35..172
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            173..464
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     CDS             452..1633
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /note="isoform 1 is encoded by transcript variant 1;
                     testis specific basic protein"
                     /codon_start=1
                     /product="testis-expressed basic protein 1 isoform 1"
                     /protein_id="NP_001001177.2"
                     /db_xref="CCDS:CCDS37586.1"
                     /db_xref="GeneID:407788"
                     /db_xref="MGI:MGI:3039565"
                     /translation="MADLEIVLAVILTVLALAILTILIARWSRRRNNGAGMSRFASEQ
                     SISHGRHKRRGKQFRFLCRTGSVINEDPHCVSFPLGSRCSFSSDSELTQKTFLQTPGP
                     IVQCMDSSESCTPEGSNAVIPVDICCQPALKPSCCQQLAIKPSCCQPCQPCQPCQPYQ
                     PCQPSPPDTLPLLITQRTSTKCGPPIILKKPSDCKGQMVRHGGSVTFQGIGDDQIKCC
                     KEWRRCQCEYCCPKRFEPHRRGTIWCEQPAPSSSHQHQHQQQQQQQPPPPPPPPRSQD
                     AQVRGDQRMESEIDAQTICYEEPFLFRRLESLIRRNQDGIVIKQNEDGFLIKKAEEGK
                     KKKKTSRRASAHPETDSDSSAPQTGEAPFESKPPEEQPEGEEKKRKKEKKKKKKKDKD
                     G"
     exon            465..551
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            552..584
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            585..719
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            720..740
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            741..761
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            762..782
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            783..794
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            795..809
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            810..830
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            831..857
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            858..887
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            888..944
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            945..968
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            969..989
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            990..1013
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            1014..1028
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
     exon            1029..1900
                     /gene="Tsbp1"
                     /gene_synonym="NG8; Tesb; Tesbp; TSBP"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agggggattc taacaagccc gaaggaaaga gaagggctgg ctgcttaccc caggaaacaa
       61 atcctcagac agtaagccct caactctgaa ggaaaatgtg gctttgtaca catcacatgg
      121 cctttatgac aagaaactga gccatgtgtt agtagggtaa cttccaacgt ctacccctca
      181 cctctaggaa cttcccttgc ctttggatgt tctgagcctt tgttacaaca cagattctag
      241 aaccttcata ggccatatac cccatacatc cgatcaacct aagccacata tttcctggga
      301 ggccttctgc acctttgtct atgaggatct ccctgatact cagggtctca tagctcaggg
      361 atagtggcct ttcaacgctt gttttatctt gagctctctc tgacaaaaga gtccagatga
      421 cgtgggactt actggagaca ataaccggaa gatggcagat ctcgaaatag ttttggctgt
      481 catcctgact gtattggccc ttgctattct gactattctg atagcaagat ggtcacgtcg
      541 taggaacaat ggggcaggga tgtccagatt cgcttcagaa cagagtattt cccatgggag
      601 acacaaaaga cgaggtaaac agtttcgttt cctatgcagg actggcagtg ttatcaatga
      661 ggaccctcac tgtgtctcct ttcctttagg atctcgttgc tcgttttcat cagatagcga
      721 actgactcaa aaaaccttcc tgcaaactcc tggacctatt gtacaatgta tggattccag
      781 tgaaagctgc acccctgagg gatccaacgc tgtaatacct gtggacatat gttgtcaacc
      841 agcactgaag cctagctgtt gtcaacagct agcaatcaaa cctagctgtt gtcagccttg
      901 tcagccttgt cagccttgtc agccttatca accttgtcag ccttctccgc cagacacctt
      961 gcccttatta attacacaga gaacttcaac aaaatgtgga ccacctataa tattgaaaaa
     1021 gccatcagat tgcaaaggcc agatggtaag acatggaggg agtgtaacct tccagggtat
     1081 cggagatgac caaataaagt gctgtaagga gtggagaaga tgccagtgtg aatactgctg
     1141 tccaaagaga ttcgagcccc acagacgagg aaccatatgg tgtgaacaac cagctccttc
     1201 ctcttctcat cagcatcagc atcagcagca gcagcagcag cagccaccac cgccgccgcc
     1261 tccaccacga agtcaagatg ctcaagtaag gggtgaccaa agaatggaaa gtgaaattga
     1321 tgcccagacc atatgttatg aagagccatt ccttttcaga agactggagt ccctgataag
     1381 gaggaaccaa gacgggatag taataaagca gaatgaagat ggctttctga taaagaaggc
     1441 agaggaaggc aaaaagaaaa agaaaacatc caggagggca tcagcacacc cagaaacaga
     1501 ttctgattcc agcgctccac agaccggaga ggctcctttc gaaagtaaac cacccgaaga
     1561 acaaccagag ggagaagaga agaaacgcaa gaaagaaaag aagaaaaaga agaaaaaaga
     1621 caaagacggc tgagaaagga ggaggaggac agggcaaaac atggcctcca atgtgatctc
     1681 cccatcagat acaagccgca tctgccctca ccccggtgca tcatggttat aaaatccaat
     1741 ccctctagac atcttcattt tctgctgctc agaaggttgc ctttatcaca cctccctgcc
     1801 acatcttcat cttccaaatt ttgctttatt agtcaacata tataatccaa ttaagaaaga
     1861 cggtgttatc tgaaataaaa tgtctttagt aaatatctaa
//
