LOCUS       XM_006526577            1033 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus tRNA phosphotransferase 1 (Trpt1),
            transcript variant X1, mRNA.
ACCESSION   XM_006526577
VERSION     XM_006526577.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006526577.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..1033
                     /gene="Trpt1"
                     /gene_synonym="Gm35838; Tpt1; Tpt1h"
                     /note="tRNA phosphotransferase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 189
                     ESTs, 161 long SRA reads, 6 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 41 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:107328"
                     /db_xref="MGI:MGI:1333115"
     CDS             222..971
                     /gene="Trpt1"
                     /gene_synonym="Gm35838; Tpt1; Tpt1h"
                     /codon_start=1
                     /product="tRNA 2'-phosphotransferase 1 isoform X1"
                     /protein_id="XP_006526640.1"
                     /db_xref="GeneID:107328"
                     /db_xref="MGI:MGI:1333115"
                     /translation="MNAPGGRRKEGRRTHRPREQDRNVQLSKALSYALRHGALKLGLP
                     MRADGFVPLQALLQLPQFHSFSIEDVQLVVNTNEKQRFTLQPGEPSTGLLIRANQGHS
                     LQVPELELTPLETPQALPLTLVHGTFWKHWPSILLKGLSRQGRTHIHLASGLPGDPGV
                     ISGIRPNCEVAVFIDGPLALTDGIPFFCSANGVILTPGNAEGFLLPKYFKEALQLRPT
                     RKPLSLAGDKETETQSGPKLSSRGGRRKIQQ"
ORIGIN      
        1 ggatcccgcc ctccgcagtg gagcccttca gatctatgca gacccgccga cctacttgtc
       61 aacgcatacg ccagcccggt gcccggggca gccgtgctgt gatctgattt cagggcccgg
      121 ggtctggtcc ggatccctcg ggcctcgagg ctgccagtgt gaccttgagc aagtctcgcc
      181 cgctgggcct caagttccct tgctgaacta gggtcttgat catgaacgcc cctggaggaa
      241 ggaggaagga aggtagaagg actcatagac cccgggaaca ggaccgaaat gtgcagctgt
      301 ctaaggctct gtcctatgcc cttcgccacg gggccttgaa gctgggactt cccatgcgag
      361 ctgatggctt tgtgcccctg caagccctcc tgcagctgcc ccagttccac agcttttcca
      421 ttgaagatgt gcagctcgtg gtcaatacca acgaaaagca gcggtttacc ctgcagccag
      481 gcgagccgag cactgggctc ctcatcaggg ccaatcaggg ccactcccta caagtccctg
      541 agttggaact gacgcccctg gagacaccac aagccctgcc cttgacacta gtccatggta
      601 cattctggaa gcactggcca tctattctac taaagggctt gtcacgccaa ggaaggacac
      661 acatccactt ggcctcagga ttgcctgggg accctggtgt catcagcggc attcgtccaa
      721 attgtgaggt ggcggtgttc atcgatggac ccctagccct cacagatgga atccctttct
      781 tctgctccgc caatggtgtg attctgactc cagggaatgc tgaaggcttc ctgcttccca
      841 agtacttcaa ggaggccctg cagcttcgac ctacacgaaa gcctctctcc ttggctggtg
      901 ataaagagac agagactcag agtggcccca agctcagttc cagaggagga agaagaaaga
      961 tccaacaata aaatatttat ttattaaaaa acctgaaaca gacacagaaa gaaagtccag
     1021 cttcaaacca gga
//
