LOCUS       XM_030248822            2159 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus trophinin associated protein (Troap),
            transcript variant X2, mRNA.
ACCESSION   XM_030248822
VERSION     XM_030248822.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..2159
                     /gene="Troap"
                     /gene_synonym="E130301L11Rik; tastin"
                     /note="trophinin associated protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 12 ESTs, 286 long SRA reads, and 98% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 19 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:78733"
                     /db_xref="MGI:MGI:1925983"
     CDS             940..2025
                     /gene="Troap"
                     /gene_synonym="E130301L11Rik; tastin"
                     /codon_start=1
                     /product="tastin isoform X2"
                     /protein_id="XP_030104682.1"
                     /db_xref="GeneID:78733"
                     /db_xref="MGI:MGI:1925983"
                     /translation="MKRFAIRRKAQFTPLRSLPKVQQAQWLSGLSPHSSPEEPALPWR
                     QIAMKLFDQESRITLQKEPRKPSVASTSGPRPKRTPSHQELRIQRINILQQLLQQEVE
                     GLAMGDGAPLNGGSAFDMTELKLPTAEISRTLTASEHNSGAALVGLSQHSGATEPLLS
                     EECEEPQAYPEETKAAQPCSTTELKPPVPHRAEPELPEPCLPALSGPPLPSCRGQAEP
                     PMACPRTEPGASAACALEAGTPESSTQPCCNQGPPATASLTFSSQSPVCASPSIHSLY
                     PTGYSGPSSLAPRTLALRQRLRACLDTIHSFQEAHLDDECAFYTSRAPPPGPTRVFTN
                     PVVTTLEWQDALRFVPIGPVVPQDSPS"
ORIGIN      
        1 tttacaaacc ggggaagcag cagcagccgc aagcagaagc agaagcagaa acccaagaaa
       61 tcggcgaaaa acccgaggaa gtagaggtga cccggagggc ctcctggaat gccgccatga
      121 ctaccctcca aaccaataag gatccccatc tccgaggtgt atctcccaac cctagcaaga
      181 ttccagtact ctcccaaaga tgccaagatt tttcctcagt caagtcgcgc tctctggacc
      241 aggagaacca agatccgagg acaccagcac agaaaccacc gcgcagtact caacgtcaac
      301 gtccactcac tgacacggca ggcctcagat cgaaaacctt gcaccagact gaaaaatcac
      361 caagcttgaa gaccctgcgg aaccctctgg aggaactcaa gcctagctct gggggatcaa
      421 atgtggggct tgtgacccat ccccagacag aggccatagg ggctatagag tttgtggctg
      481 accctgcagc cctggccacc atcttgtcag agtgcaaggt cttctgcata cctggctccc
      541 agaatcccca cccatcaagt gggtcctgcc agggcttcct gcttctcaag actggagggc
      601 ccgggactcc gggaccacac tttgtcccca ccccggttag aggctctgaa tccacctcca
      661 ggctcctctc actcctccac tcgacccagc ttacaggagc taagaagaga gacatgtggc
      721 ggcggcaggg acggggactg tactgacaga aggacctcag caagccaagc ctcaagactg
      781 ctcctgaaga ccccggttca gcctgcttcc ttacccctcc gaggcgagca ggaggctgtc
      841 cctcactccg acgacggagg gggaagacat catctgggtc tggctcaacg gataccatta
      901 aaagaaagtc tgacaaacac caggagcaca tattcatcca tgaaacgctt tgccattcga
      961 cggaaagccc aattcacacc cctccgatcg ctacctaaag ttcagcaggc tcagtggctg
     1021 agtggcctct cccctcattc ctcccctgaa gagcctgccc tgccctggag gcagattgct
     1081 atgaagttgt ttgaccagga gagtcgcatc accttgcaga aggaacccag gaaaccatcg
     1141 gtggcaagca cttccgggcc tcgccccaag agaaccccca gccaccagga gctaaggata
     1201 cagcgcatca atattttgca acagctcttg cagcaggagg tagaggggct ggccatgggc
     1261 gatggtgccc ctctgaatgg aggctctgct ttcgatatga ctgaactaaa gctcccgacg
     1321 gctgaaattt ctagaactct gacagcttca gaacacaatt ctggagctgc ccttgttgga
     1381 ctgtcacaac actctggtgc gacagagccc ctcctttcgg aagagtgtga ggagccacag
     1441 gcctaccctg aggagactaa ggcggctcag ccctgttcta ccacagaact aaagccccca
     1501 gtgccacaca gagctgagcc agagctgccg gagccgtgcc ttccagcact gtccggaccc
     1561 cctctgccta gctgtcgggg acaggctgag ccccccatgg cctgccctag gacagagccg
     1621 ggagcatcgg cagcctgcgc tctggaagct ggaaccccag agtccagcac gcagccctgt
     1681 tgcaatcagg ggcctccagc aacagccagc ttgaccttct cgtcccaaag cccagtctgt
     1741 gccagcccct ctattcactc actctaccca acaggctatt caggccccag cagcttggcc
     1801 cctcggaccc tggctctgag gcagcgcctc agggcgtgtc tcgacaccat ccatagcttc
     1861 caggaggctc acctggatga tgaatgcgcc ttctacacca gccgagcccc acctcccggg
     1921 cccacccggg tcttcaccaa ccccgtggtc acaacgcttg aatggcaaga tgccctgcgt
     1981 ttcgttccaa ttggccctgt ggtcccacag gactctccat catgactccg gtctttactg
     2041 ggcttctcct ctgctgcact cacctcttcc tttagcctta tttattgttg gcctgcccat
     2101 tggactggga gccaacgccc ctttatcctt taataaagtt tctataaatt gtgtttgaa
//
