LOCUS       NM_026642               4133 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus tRNA methyltransferase 12 (Trmt12), mRNA.
ACCESSION   NM_026642
VERSION     NM_026642.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4133)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC107772.19.
            
            On Nov 19, 2006 this sequence version replaced NM_026642.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK019481.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4133              AC107772.19        183620-187752
FEATURES             Location/Qualifiers
     source          1..4133
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 25.09 cM"
     gene            1..4133
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="tRNA methyltransferase 12"
                     /db_xref="GeneID:68260"
                     /db_xref="MGI:MGI:1915510"
     exon            1..4133
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1583..1588
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="hexamer: ATTAAA"
     polyA_site      1601
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="major polyA site"
     regulatory      1614..1619
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="hexamer: ATTAAA"
     polyA_site      1637
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="major polyA site"
     polyA_site      1736
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
     regulatory      1784..1789
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="hexamer: AATACA"
     polyA_site      1805
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
     regulatory      2117..2122
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="hexamer: ATTAAA"
     polyA_site      2135
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
     regulatory      3305..3310
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="hexamer: AATAAA"
     polyA_site      3325
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
     regulatory      3499..3504
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="hexamer: AGTAAA"
     polyA_site      3521
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
     regulatory      3865..3870
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
                     /note="hexamer: AATAAA"
     polyA_site      3889
                     /gene="Trmt12"
                     /gene_synonym="4632406N01Rik; Tyw2"
ORIGIN      
        1 gtagcggagc gagtttagct cttccggttg tagtggaaga tttgcaggga gagagcagcc
       61 ggagaatctc gctgatggac ggcgacgggg tacaaacact agcgacatgg agagagagtg
      121 tgaggagtct gtagttgtcg cagttgtgac tgagccccgg ttcacgcaga gataccgaga
      181 ctacctggag gagcagaaac tcttggacag gctgcaccgg gtggcgaagc tgcgggatgg
      241 cgcggtggct ctgccggtgc tggcggaaag cctttctgag cagcatctgc aggagctgag
      301 ggatcgcgtg gccccaggca gcacttgtgt gctgacgcgg ctcccggatc ctcttccttc
      361 caaaaaggcc cgggttcgtt cacctgctca gatactgtgt ctggaggtga ggcgttgggt
      421 ggaggaccgc ggagtgacgt ggtccgctga gttggaggca gatttgcccc ggtcttggca
      481 acggcatggt gacctaatgc tgcttagtga agactgcttc caagccacgc tgtggaaagg
      541 tctggagcca gaactctggg agactgttgc ctcggccctg ggagttcaac gtttggcaaa
      601 acgagggcgg gtgctacctg atgggactcg aactccgtca gtgactctgc tgctgggtga
      661 ccatggctgg gtagagcata tggataatgg catccggtat aagtttgatg tgacacagtg
      721 catgttctcc tttggaaaca tcaccgagaa acttcgagtg gcgtctctgt cctgtgctgg
      781 agaggtgctg gtggatctct acgcagggat tggttatttt acattgccct tcctagttca
      841 tgctggcgct gccttcgtac atgcctgtga atggaatcct catgctgtag ttgctttaag
      901 aaacaacttg gagatcaatg gagtggcaga ccggtgccaa atacattttg gggacaacag
      961 gaaactgaag ctctcagaca ttgcagatag ggtgaacctc gggctcattc ccagttctaa
     1021 agaaggctgg cccgttgcct gccaagtgct tcggaaggac gttgggggta ttctgcatat
     1081 ccaccaaaat gtggagtctt tctcaggaaa gactccacag ccacctggaa gcaataacgt
     1141 ggaaaaagag cactggcctc gtccccagaa aatcaccact gatacacagg gaaatggaac
     1201 tactgagaat ttcagggggg aaatatcatc ggccaacaaa ccagagtggt ggagatgggc
     1261 agaatctgca gaaactcaga tcgcctctct tcttcatcaa gtgcatggga aaccatggag
     1321 gacacgaatc ttgcatgtcc acccagtgaa atcttacgcc cctcacgtgg atcacatagt
     1381 cctagatcta gaatgccggc ccctgacctc tagttggcca gaaggagtag atttactgac
     1441 acagtaattg ccagatgagt gcctcatcga gggctgtgtt ctcacccttc tgttttctgg
     1501 tgacctttta aagtgatctg tggtctgaaa atgaactcta gatcgatcca aagttgtctt
     1561 ctgttgatca cattgagaat gtattaaagt atcagaggaa accaatgtga ctcattaaaa
     1621 taggtttcac ctgtgcagac atgaattctg cattttttac cttagctttc agtgatatgg
     1681 ccttaatatt catttggtct tggatttatt tgcatataga gcctccttga attggatcgt
     1741 gtggcttttt tttctagtaa gtcatacaga cattattaca tgaaatacag tattggtccc
     1801 acagagtact agctacatta tgtgaaatca actggtaagc caagatcaaa atagggaaac
     1861 cagtgtccat ttctacagat gttttgtagt ttgcaggtac aaagtgacag tggtttgcac
     1921 taaagtggta gccatggggt cttggaaaat aataggttgg agaaaaatca gtgtgaccaa
     1981 gttatgaact ccagactgaa gcattaatgt gatgctgctt tgataccgag actaaattac
     2041 ataggaaggg gcagtaagta gaggtaactc aaattctata gcatttctca gtggagtgtc
     2101 tgtgtgtggg tgtggtatta aagtattaaa tattagatct tttttatttt atgttaaaaa
     2161 gagttaaggc ataactcatg cctgtaatct cagtacttgg aaggctgaag acaagatgat
     2221 tgctataagt tcaagggcaa ccttggtcaa ggtatagagt aagaccttgt cttaaaacca
     2281 aggatcactt ctctgaactg taatctaaag ttctagcctt gggcagtata atagctgtac
     2341 aaaaatccta agatttttat agacttcttt tcctggtcaa gaaactatag gaagcgcttg
     2401 ccttttgtca gatgctgtga acaggcagtt ggtgtcaggt gtagctggtg gaattcattt
     2461 cactaagagt tgttcgatcc tgagtcccac gtagcccagt tacataacaa gacaggaagg
     2521 gaaataaaga cagctgggaa ggcaaagctc tggtttccca cagtatgact tgtacctata
     2581 gtggtcaggt aagctagtgt tggcacagag atgtagcagg cattctaagg atgctgttga
     2641 gttttcaccc tggagatgta gcatccaggt atgctaaaac aggattacag gacttccttt
     2701 attgaggaaa tccttgaaca gtgttactag ccctgaaaag tatttctttt tcattaaaaa
     2761 aataaaacac acacacatat acatacaaga tgaaatgtct agaagcaaca gtagcagctg
     2821 ttgctactgt gggtaggaaa cacagttttc caaccatctg attatagagt cacaaggctt
     2881 tctactttcc actgcttttg ccactaggat agctaatcgc tgaggatcac atagagctct
     2941 gttttgacga actttgaagc ccagtgagct ggtttgcttg atgaaggaga cagacaacag
     3001 gatgtcttct tccttgtctt gctataaaac cccgccttac atgcgttgtg catgcctgct
     3061 gctctctttc ttgcaacagt agctataagg gctgtgccgg tgcctttctc attaagcaca
     3121 aatattcagt gcctgctaca tgtgataggt acagaaaata aaggtccatt aggttaaaaa
     3181 gtcctctccc cagggagctc acagcttagc agcagagagt acagaggtcc tcaatgctgg
     3241 agcagagtag ctgccacaca ataacttgct ggacagatgc aaaaagggga agaaagttct
     3301 gacaaataaa taggaagtct atgaggaact agaactggta cttgaattgg ttgagtgaga
     3361 ttttgctagg tggggaggaa gcagaactag gccccaaagt ttcagtgctc tggaagtgag
     3421 ccattgtgat ttgcttgtaa caggacatga tgatatgtgt gttggcaatg agactgttgt
     3481 gagcagggtc ttctacacag taaactccca aggaaatgct atcctatggc cccactgcag
     3541 agccctgctt gtaacactcc tttctcagag agtctttcct gtgtttgcct aaattgtcat
     3601 acttcctctt cactgactag gtttctttgc actcgtgcgc caacagcttg ccatatcaga
     3661 actaaaatgc taaaggtgcc aacttagggc ttgagtccaa gggagatgag tcagagcacc
     3721 acttggggac tgaggaattg ccttttgtca tatgctgtga ccaggcagtt ggtgtcaggc
     3781 ggagctggtg ggattcattt cactaaacat tgtttaatcc ttgagtccca ggtggcctgg
     3841 gttatataac aagacaggaa gggaaataaa gacagctggg aaggcaaaac actggtttct
     3901 cattacccga ggactaaatg atcaaaggtg agctagaaac ccctgattgg gattaaagtt
     3961 ttctacaaca gtcaggtaag ctagtgttgg cacggagcag acattccaag gaggctgttg
     4021 agttcttacc ctggagatgt agcatccagg tatgctaaga tgggatacag gacttgtatt
     4081 aaggaaatcc ttgatcagca acatgaaccc tgaaaagtct aatctttgcc att
//
