LOCUS       NM_029092               1858 bp    mRNA    linear   ROD 04-APR-2024
DEFINITION  Mus musculus tRNA methyltransferase 10C, mitochondrial RNase P
            subunit (Trmt10c), mRNA.
ACCESSION   NM_029092
VERSION     NM_029092.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Lewandowski,J.P., Du,F., Zhang,S., Powell,M.B., Falkenstein,K.N.,
            Ji,H. and Vokes,S.A.
  TITLE     Spatiotemporal regulation of GLI target genes in the mammalian limb
            bud
  JOURNAL   Dev Biol 406 (1), 92-103 (2015)
   PUBMED   26238476
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Bogenhagen,D.F., Martin,D.W. and Koller,A.
  TITLE     Initial steps in RNA processing and ribosome assembly occur at
            mitochondrial DNA nucleoids
  JOURNAL   Cell Metab 19 (4), 618-629 (2014)
   PUBMED   24703694
REFERENCE   3  (bases 1 to 1858)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   4  (bases 1 to 1858)
  AUTHORS   Osipovich,A.B., Singh,A. and Ruley,H.E.
  TITLE     Post-entrapment genome engineering: first exon size does not affect
            the expression of fusion transcripts generated by gene entrapment
  JOURNAL   Genome Res 15 (3), 428-435 (2005)
   PUBMED   15741512
REFERENCE   5  (bases 1 to 1858)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC171202.1.
            
            On Jan 22, 2019 this sequence version replaced NM_029092.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK166781.1, AK005047.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-286               AC171202.1         58125-58410
            287-1858            AC171202.1         60620-62191
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 33.79 cM"
     gene            1..1858
                     /gene="Trmt10c"
                     /gene_synonym="1300018J16Rik; D16Ertd454e; Rg9mtd1;
                     Rnmtd1"
                     /note="tRNA methyltransferase 10C, mitochondrial RNase P
                     subunit"
                     /db_xref="GeneID:52575"
                     /db_xref="MGI:MGI:1196261"
     exon            1..286
                     /gene="Trmt10c"
                     /gene_synonym="1300018J16Rik; D16Ertd454e; Rg9mtd1;
                     Rnmtd1"
                     /inference="alignment:Splign:2.1.0"
     exon            287..1858
                     /gene="Trmt10c"
                     /gene_synonym="1300018J16Rik; D16Ertd454e; Rg9mtd1;
                     Rnmtd1"
                     /inference="alignment:Splign:2.1.0"
     CDS             308..1552
                     /gene="Trmt10c"
                     /gene_synonym="1300018J16Rik; D16Ertd454e; Rg9mtd1;
                     Rnmtd1"
                     /EC_number="2.1.1.218"
                     /EC_number="2.1.1.221"
                     /note="mitochondrial ribonuclease P protein 1;
                     mitochondrial RNase P protein 1; RNA
                     (guanine-9-)-methyltransferase domain-containing protein
                     1; RNA (guanine-9-) methyltransferase domain containing 1;
                     tRNA methyltransferase 10 homolog C; tRNA
                     (adenine(9)-N(1))-methyltransferase; tRNA
                     (guanine(9)-N(1))-methyltransferase; mRNA
                     methyladenosine-N(1)-methyltransferase"
                     /codon_start=1
                     /product="tRNA methyltransferase 10 homolog C precursor"
                     /protein_id="NP_083368.1"
                     /db_xref="CCDS:CCDS28220.1"
                     /db_xref="GeneID:52575"
                     /db_xref="MGI:MGI:1196261"
                     /translation="MNVTVRFLRPFARCLVPYTFHRKRSHLYSGVLQRYMSSKAPSLS
                     CHNKDSASPPEQLELDGWKATMKSSIQEDGVSEVSDKDEDSLASTRELIEMWRLLGKE
                     VPEHITEEDLKTLMECASKSAKKKYLRYLYGKEKAKKAKQVKKEMKAEAREEAKRARL
                     LETTAEEQQQDFMFLRLWDRQINIALGWKGVQAMQFGQPLVFDMAYDNYMKPSELQNT
                     VSQLLESEGWNRRNVDPFHIYFCNLKIDSAYHRELVKRYREKWDKLLLTATEKSPVDL
                     FPKDSIIYLTADSPNVMTTFKHDKIYIIGSFVDKNTQTGTSLAKAKRLNIATECLPLD
                     KYLQWEIGNKNLTLDQMIRILLCLKNTGNWEEALKFVPRRKHTGYLEVSEQSQELVRK
                     LKKTKTLNSFRKGSLNVRTWKR"
ORIGIN      
        1 gcggcggaaa ccctcgcggt gcagtgcagg ccgcggtgtg cacgcggatc tgctccggag
       61 tcctgcagcc cagccgccgg ccgcagtctg ggtacctgcg gagcttctct ctgccggtgc
      121 tggggtgctg ggtggacccg ctggctttcc aggatgcggg gcgtggaacg tggcctctga
      181 gaaccccagg cgagaggaag ccgtgctgta ggagtcgtta ggcacggcgc tacctgaagc
      241 ggaagccgcg ttcacccaga tcgtctcctg tgtcgcgctt taaagtggtt cctcacattt
      301 cttcaaaatg aatgtgactg tccgtttctt aagacctttt gccagatgtc tggtgccata
      361 tacctttcat aggaagagaa gtcatttata ttcaggagtt ctgcagagat acatgtcctc
      421 caaagcacct tctttgtctt gtcataataa ggacagtgca tcccctcctg agcagctaga
      481 attggatggg tggaaagcta caatgaagtc gagcattcaa gaagatggtg tttcagaggt
      541 ctcagacaaa gatgaagatt ccctcgcctc aaccagagaa ctaattgaga tgtggagatt
      601 gcttggcaaa gaagtaccag aacatattac tgaagaagat ctcaaaaccc ttatggaatg
      661 tgcctctaaa tcagccaaga agaaatactt acggtatctg tatgggaagg aaaaggcgaa
      721 aaaagctaag caggtaaaga aggagatgaa agcggaggcc agggaagaag caaaaagggc
      781 caggttgcta gagaccaccg cagaagaaca acagcaagac ttcatgtttc ttcgactatg
      841 ggatcgacag atcaacattg cactgggttg gaagggtgtc caggctatgc agtttggaca
      901 gcctttggtt tttgacatgg cctatgataa ttacatgaaa ccaagtgaac tgcagaatac
      961 tgtttctcaa cttttagaaa gtgaaggatg gaacagaaga aatgttgatc ctttccacat
     1021 ttatttctgc aatcttaaaa tagatagtgc ttatcataga gaattagtta aacgttatag
     1081 agaaaaatgg gacaaattgc tcttaacagc aacagaaaag tctcctgttg atttatttcc
     1141 aaaggacagt attatatatt taactgcaga ttctcccaat gttatgacta ccttcaagca
     1201 tgataaaatt tatataattg gatcatttgt tgataaaaat acacagacag gaacatcctt
     1261 agccaaggcc aaacggttaa acatagcaac agagtgcctt ccactagata aatatttaca
     1321 atgggaaatt ggtaacaaaa atctcacctt agatcagatg atccgaattt tgctctgcct
     1381 gaaaaacact ggtaactggg aagaggctct caagtttgtt cccaggagaa agcatactgg
     1441 ttatttagag gtttctgagc aatctcagga acttgttagg aaactgaaga agacaaagac
     1501 tttaaattca tttcgaaaag gctccttaaa tgtgcgcacg tggaaaaggt gacctaagtg
     1561 agaaagtatg gtgaaagaag aaaacaggct gaaagtatgg tgacaagaat gtagttattc
     1621 ctaaatggaa ttatctctta aagtcagtct ctctagacta acagtagagg tttgcctatt
     1681 ttttcttctt ctttgctttt ttgcaacagg atttccatgt agccttgtcc tccatcaagg
     1741 ccagactaga cgtatgtatc agcaaaactt tgaaagtatg ttttatttgt tgtaaaaaca
     1801 atcaagttta taattaatct agaattgaac acaataaaag ttaatattat ttattttt
//
