LOCUS       XM_036164355            1854 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus tRNA isopentenyltransferase 1 (Trit1),
            transcript variant X1, mRNA.
ACCESSION   XM_036164355
VERSION     XM_036164355.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..1854
                     /gene="Trit1"
                     /gene_synonym="2310075G14Rik; IPPT; IPT; MOD5"
                     /note="tRNA isopentenyltransferase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 35 ESTs, 184 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 24 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:66966"
                     /db_xref="MGI:MGI:1914216"
     CDS             58..1206
                     /gene="Trit1"
                     /gene_synonym="2310075G14Rik; IPPT; IPT; MOD5"
                     /codon_start=1
                     /product="tRNA dimethylallyltransferase isoform X1"
                     /protein_id="XP_036020248.1"
                     /db_xref="GeneID:66966"
                     /db_xref="MGI:MGI:1914216"
                     /translation="MAAAAAARAVPVSSGFRGLRRTLPLVVILGATGTGKSTLALQLG
                     QRLGGEIVSADSMQVYEGLDIITNKVSAQEQKMCQHHMISFVDPLVTSYTVVDFRNKA
                     TALIEDIFARDKIPIVVGGTNYYIESLLWKVLITTKPQEMGTGKVVDRKVELEKEDGH
                     ELHKRLSQVDPEMAAKLHPHDKRKVASQDYQHGIFQSIGFKEFHEYLTTEGKCTPETS
                     NQLLKKGIEALKQVTKRYARKQNRWVKNRFLSRPGPSVPPVYGLEVSDVSKWEESVLE
                     PALNIVQSFIQGHKPTAMPVKMAYNESENKRSYHMCDLCDRIIIGDREWAAHLKSKSH
                     LHQLKKRRRLDLDAVSATGSQSNSPDCDPERIEGESSGQHNQELKASV"
ORIGIN      
        1 cgcactgact gttgccatgg ggacagctgc ttcggcgcat gctcagatgc cttcaagatg
       61 gcggctgcgg ctgctgcacg agcagttcct gtgagctctg gattccgagg cctgcggcga
      121 acactgccac ttgtagtgat tctcggggct actgggactg gcaagtccac cctggctctg
      181 cagttaggcc agcggctcgg cggcgagatc gtcagcgccg actccatgca ggtctatgaa
      241 gggctagaca tcatcaccaa taaggtctct gcccaagagc agaagatgtg ccagcaccac
      301 atgatcagct ttgtggatcc acttgtgacc agctacaccg tggtggactt taggaacaaa
      361 gcaacggccc tgattgaaga tatttttgct cgagacaaaa ttcccattgt ggtgggagga
      421 accaattatt acattgaatc tctgctctgg aaagttctta ttactaccaa gccccaggag
      481 atgggcactg ggaaagtggt tgatcggaaa gtagagcttg aaaaggaaga tggtcatgaa
      541 ctccataaac ggctaagcca ggtggaccca gaaatggccg ccaagctaca cccgcatgac
      601 aaacgcaaag tggccagcca ggactatcaa cacggtatct tccagtcaat tggcttcaag
      661 gaatttcacg agtacctgac cactgagggg aaatgcacac cagagactag taaccagctt
      721 ctaaagaaag gtattgaggc tctgaaacaa gtaactaaga gatatgcccg gaaacagaac
      781 cgatgggtta aaaaccgctt tttgagcaga cctgggccca gtgtcccccc ggtatatggc
      841 ttagaagtat ctgatgtttc caagtgggag gagtctgttc tggaacctgc tctcaatata
      901 gtacaaagtt tcatccaggg tcacaaacct acagccatgc cagtgaagat ggcatacaat
      961 gaaagtgaga acaagagaag ttaccacatg tgtgacctct gtgaccggat catcattggg
     1021 gaccgggaat gggcagcaca tttaaaatcc aaatctcact tgcaccaatt gaagaaaaga
     1081 agaaggttgg acttagacgc tgtcagtgcc acaggaagtc aaagtaattc cccagactgt
     1141 gacccggaac gcatcgaggg ggaatcctcg gggcagcaca atcaagagct gaaggccagt
     1201 gtttgagaga catgcctagt ggcctttgca gagacgtggg gatcaagccc aggagggagg
     1261 ggagtgtcgc tctcccacgc ctggactgag gaatgctggg cagaaggccc caccatcttc
     1321 tttcattctg tgctgtggtc tgcagtggaa acagcaggcc tttcagctcc ttgtgtgcct
     1381 gttgtgtctg gtaatgatgt agttcagagt gggatttttt tctttgaacc ttaaaggttt
     1441 tattttagaa cgaggcacag atcgcacatt ttctacttga ggatcttttt tagtggtgaa
     1501 taccaagatt cagtgcatcc tttaaaagag cgttcttgtc cctggcgctg gctaaaaata
     1561 gctcgtttcc agatgctttt gtagatgact gaagtattgt aaggcgcagt caggagctct
     1621 ggactcgaga acggcagaaa ggagtagtgc agagagatga ttaagcaaac tctcccagct
     1681 ctgtgaatct acagaagagg gggtcaggct gaggtggttg tgacctggat cttgaagact
     1741 aaaagacaca gagtctgctg agctgctcct gtgcatggtg gctgtctctt catctagggc
     1801 agaaatctat agattctttt gaaatgtaaa taaaaagatt gtaaacgccc tata
//
