LOCUS       NM_026760                897 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus telomerase RNA component interacting RNase (Trir),
            transcript variant 1, mRNA.
ACCESSION   NM_026760
VERSION     NM_026760.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   White,R.A., Sokolovsky,I.V., Britt,M.I., Nsumu,N.N., Logsdon,D.P.,
            McNulty,S.G., Wilmes,L.A., Brewer,B.P., Wirtz,E., Joyce,H.R.,
            Fegley,B., Smith,A. and Heruth,D.P.
  TITLE     Hematologic characterization and chromosomal localization of the
            novel dominantly inherited mouse hemolytic anemia, neonatal anemia
            (Nan)
  JOURNAL   Blood Cells Mol Dis 43 (2), 141-148 (2009)
   PUBMED   19409822
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC163703.4.
            
            On Feb 8, 2019 this sequence version replaced NM_026760.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC029622.1, AK009653.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-402               AC163703.4         134067-134468       c
            403-480             AC163703.4         131685-131762       c
            481-897             AC163703.4         131010-131426       c
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 41.49 cM"
     gene            1..897
                     /gene="Trir"
                     /gene_synonym="1110002H14Rik; 2310036O22Rik"
                     /note="telomerase RNA component interacting RNase"
                     /db_xref="GeneID:68544"
                     /db_xref="MGI:MGI:1922833"
     exon            1..402
                     /gene="Trir"
                     /gene_synonym="1110002H14Rik; 2310036O22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            403..480
                     /gene="Trir"
                     /gene_synonym="1110002H14Rik; 2310036O22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            481..897
                     /gene="Trir"
                     /gene_synonym="1110002H14Rik; 2310036O22Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      867..872
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trir"
                     /gene_synonym="1110002H14Rik; 2310036O22Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      892
                     /gene="Trir"
                     /gene_synonym="1110002H14Rik; 2310036O22Rik"
                     /note="major polyA site"
ORIGIN      
        1 gtcccgcgcc aagcgcgcgg tctgagagcc tttcccgacg tcctttgcac ggcatctggc
       61 cacaaaatgg ctgcccgagg gagacgggcg gagcctccgg gtcgggaggc gcccggcccg
      121 gcgggcagcg gcaggagccg atgggctgag tcgggaccgg gaacgtcacc cgagagtggg
      181 gacgacgagg tgtcgggctc gagtccggtg tccagcggtg tgaacttgtt tgccaacgat
      241 ggcagcttcc tggagctgtt caagcggaag atggaggagg agcagcggca gcggcaggag
      301 gagccacccc cgggcccgca gcgacccgat ccaccggcct ccgccgcggc gggcccaggg
      361 aatccgaaga ggaagggcgg cccaggcccc acgctcagct tcgtgggcaa gcgcagaggc
      421 gggaacaaac tagccctcaa gacgggaata gtagccaaga agcagaagac ggaggatgag
      481 gtattaacaa gtaaaggtga cgcatgggcc aagtacatgg cagaagtgaa aaagtacaaa
      541 gcccaccagt gcggggatga tgataaaact cggcccctgg tgaaatgact ccctcccggg
      601 tgctcactac ctgggactct ctgcgatgta cataatattt aatgcggttc cggcagcagc
      661 cttctctgga ggactgatac acagaaggaa acgaaggcgc ttgctgtggc cgcagaccgt
      721 tctccaggac tcttttttta ccttgagcac ttgcctcctc agacttttag accagtggtt
      781 tactgtgccc tttcttccca tcaccttgct ctctctggct ctgtctcttc ttgctgtctc
      841 tctcctttta gcagtcactt ctgagaagta aagaacctga cttagtgctg gagtttg
//
