LOCUS       NM_173746               1498 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus triple QxxK/R motif containing (Triqk), transcript
            variant 1, mRNA.
ACCESSION   NM_173746
VERSION     NM_173746.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1498)
  AUTHORS   Onuma,Y., Watanabe,A., Aburatani,H., Asashima,M. and Whitman,M.
  TITLE     TRIQK, a novel family of small proteins localized to the
            endoplasmic reticulum membrane, is conserved across vertebrates
  JOURNAL   Zoolog Sci 25 (7), 706-713 (2008)
   PUBMED   18828657
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL808105.15.
            
            On Jan 26, 2010 this sequence version replaced NM_173746.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Both variants 1 and 2 encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK048604.1, SRR7345562.4289309.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849382, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-102               AL808105.15        114442-114543
            103-252             AL808105.15        125521-125670
            253-331             AL808105.15        170550-170628
            332-417             AL808105.15        182335-182420
            418-1498            AL808105.15        188010-189090
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 5.58 cM"
     gene            1..1498
                     /gene="Triqk"
                     /gene_synonym="C130086A10; Gm11818"
                     /note="triple QxxK/R motif containing"
                     /db_xref="GeneID:208820"
                     /db_xref="MGI:MGI:3650048"
     exon            1..102
                     /gene="Triqk"
                     /gene_synonym="C130086A10; Gm11818"
                     /inference="alignment:Splign:2.1.0"
     exon            103..252
                     /gene="Triqk"
                     /gene_synonym="C130086A10; Gm11818"
                     /inference="alignment:Splign:2.1.0"
     exon            253..331
                     /gene="Triqk"
                     /gene_synonym="C130086A10; Gm11818"
                     /inference="alignment:Splign:2.1.0"
     exon            332..417
                     /gene="Triqk"
                     /gene_synonym="C130086A10; Gm11818"
                     /inference="alignment:Splign:2.1.0"
     exon            418..1498
                     /gene="Triqk"
                     /gene_synonym="C130086A10; Gm11818"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1473..1478
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Triqk"
                     /gene_synonym="C130086A10; Gm11818"
                     /note="hexamer: AATAAA"
     polyA_site      1491
                     /gene="Triqk"
                     /gene_synonym="C130086A10; Gm11818"
                     /note="major polyA site"
ORIGIN      
        1 tgcggctctt cgtcccgccc ctgcctctga gtgacagcag cgtggacagc tgcccacccg
       61 gccggacccg cagttgggcc gccctcgctg ggcaatgctg agtaagaaaa atcaaccaag
      121 agtgtaattt ttggcaagga gttgaatttg ccaggaatgc tgcagagctt ctgagacttg
      181 cttcgggaaa catctcttgt tttggccgct ttccagagtt tcgacttggc agcctcaagg
      241 acacagcgta aggtattttg gagatcaaag atgggtagaa aagactcttc caatacaaaa
      301 cttcctgttg atcagtacag aaagcaaata ggtaaacagg attataaaaa aaccaaacct
      361 attttacgag caaccaaatt aaaagcagaa gcaaagaaaa cagcaatagg cataaaggaa
      421 gttggcctca tgcttgcagc tatcctggcc ctcctactgg ctttctatgc cttcttttat
      481 ctccgactgt ccacgaatat tgactctgat ctggacctgg atgaagatta gctaaacaac
      541 aatcaaaaaa ggataggaaa taagtctgat aagagcatct ttggggacaa acacattacc
      601 aatttccaaa actagaacag ttggaaaacg tgcttcttgc tactgtcagt ttgcagaaat
      661 atctttgtgc ttagtggcat agaatatcaa aagaagacct tacccagcaa tctaggatca
      721 tgtatgctac ttgatacttt ataaatctct ctgtcctggc agatatccta ttcatggtac
      781 agttaaataa gatggtaatg tatttttttc cagattgtgt tccagtgtac atatatgact
      841 ccatcagtta caaatcacta aatctattat atcctacata tattgtaata aaatatgtat
      901 tgccatttgc agaagcatac tcaaaatcat attcagaatc caagaaggaa cagaaagcca
      961 taggaaattg ctatttaaaa ggaagtgtgc tttctttcca gacatatttc atgtcattag
     1021 ggagactatc tgcacataca ggcacagtaa tctttttctt ccttgccaac tgttagtgca
     1081 catgtgctgc gtcagaaatg gcacctggat gacagaagct caaagagtca catatgtccc
     1141 taaagtggag ttcctcgtct cctgggctgc ctgaactggt gtaaatagaa agttcagctg
     1201 atcttgattt taattaactt attacaccat taatataaag ttggaattct atattaatta
     1261 tgttgttctg gctgcctgca gtatcagttt gccctcttgt tagggagcag tgtaacaatc
     1321 tgccatttaa ttgtgcaggg ttttttacac tgcagaatta gcaggagtgt atgtacacag
     1381 aattttcttg gtttgtctct cacatttgag cattacaaag ttttttttaa ttgcattttg
     1441 tctcttgtga attaattaag actgtagaga aaaataaata atagaaaaat acatgtca
//
