LOCUS       XM_006520284            7325 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TRIO and F-actin binding protein (Triobp),
            transcript variant X1, mRNA.
ACCESSION   XM_006520284
VERSION     XM_006520284.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7325
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..7325
                     /gene="Triobp"
                     /gene_synonym="EST478828; mKIAA1662; Tara"
                     /note="TRIO and F-actin binding protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 mRNAs, 123 ESTs, 388 long SRA reads, 6 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 11 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:110253"
                     /db_xref="MGI:MGI:1349410"
     CDS             608..6655
                     /gene="Triobp"
                     /gene_synonym="EST478828; mKIAA1662; Tara"
                     /codon_start=1
                     /product="TRIO and F-actin-binding protein isoform X1"
                     /protein_id="XP_006520347.1"
                     /db_xref="GeneID:110253"
                     /db_xref="MGI:MGI:1349410"
                     /translation="MSMEQDTRALLPTQGTAWATASAPVARLQGPQGDSHQACSQEPH
                     SPSSAEAPYCDLPRCPPALQNPLRTTTCVGQSVHSLGLGLGQEPQRVWSPTTALPAEG
                     PAAAPKNRHQDSEGIPYLEGLARSSCTDDNDNKDEDEDPNSNTSSSQDSNTPHDTSNS
                     SSVQDWDTTERPGVVPSRNRLTEMIPRRPQEGLRADSARKATRSPARGDTAGQRKENS
                     GSGGQSAGQHWAKLRSESGYFSLERQRSGQTQASSGTPPSGPRGTTQASSAQRDVFQA
                     APAQEAPQTSSLPRNTQRDTQRSTPRTSSPSRVSQRDTPRVMSTQRKNTPLSSPLRAT
                     PETLKISAPEDGTHVTPSPCVQDSSLNRTSQRDSSRTPCIQWDNPRASSPNRTTQRDN
                     PRTPCTQRDNPRASSPNRTTQRDNPRTPCTQRDNPRASSPNRTTQRDNPRTPCAQRDN
                     PRAASPNRSTQRDSPRTPCAQRDNPRASSPNRTAQRDNPRTPCAQRDNPRTSCTSQNT
                     PRTPSTQADKTTASCSKWEHLRSACTQRDNPRTFSQGCTQKDNPGPPSPRRATQGSNS
                     RNPSPHRTNKDIPWASFPLRPTQSDSPRTSSPSRTKQNQVPWASISLRPTQGDKPQTS
                     APTRLAHNDPPQQYSPSLATTSSSSHNPGHSSASRTSSPLHAAPRGAPQTSLESSQPP
                     CTVCIGHRDAPRASSPPRYFQYDPFPFFPDPRSSESESPHHEPPYMPPAVCIGHRDAP
                     RATSPPRHTQFDPFPFLPDTSDADNESPQHDPPQFPPPVCIGYRDAPRASSPPRQFPE
                     PSFFQDLPRASTESLVPSTDSMHEPPHIPTPVCIGHRDAPSFSSPPRQAPEPSLFFQD
                     PPGTSMESLAPSIDSLHGCPLLPPQVCIGHRDAPRASSPPRHPPSDIGLLAPSPPPGS
                     SGSRGSAPPGETRHNLEREEYTMLADLPPPRRLAQRGPEPQAQGSNEGRTRSPGRAEV
                     ERLFGQERRKSEAPGAFQTRDEGRSQRPSQAQSQLRRQSSPAPSRQVTKPSAKQAEPT
                     RQSRTGPPHPKSPDKRPEGDRQLQRTSPPARTPARPPERKAQIERHLESGHTGPRQSL
                     GGWQSQERLSGPQSPNRHPEKSWGSQKEGPSLGGWPELEGPSLEGIWRGPPQEHREQW
                     GHSEAWEEPPSNGIQGAPPRGQGRLQELSRPHQPTPSSENSWAGPAECSCALQPEAST
                     AVGWRAEGTSPHQRSAERPPDLDWRDLLGLLRAPEDGAWTRLPRLDWEGLLELLQARL
                     PQKDPARHWHDPAKASGPEQGSSGTEDTLKTEPQTQPEGRAKATLANGHRPGQQSESP
                     AQLPSPACTSTQWPTTKVTSGPETSPLAALEQIDHLESHSPPDLEFQPEEPEASEPSR
                     GEDSRAVQKQADSADKRPAEGKAGSPLKGRLVTSWRMPGDRPALFNPYLLSLGVLRWQ
                     RPDLLNFKKGWMSILDEPGEWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTD
                     VTEYAVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEALRKTVRPTSAPDVTKLSDCNK
                     ENTLHGYGTQKSSLKIGEQRTGSEVIGRGGPRKADGPRPSLDYVELSPLAPSSPQRMR
                     TLSRSTPERPTKQEDLERDLAQRSEERRKWFESTDGRTPETPSGDGSRRGLGAPLTDD
                     QQSRLSEEIEKKWQELEKLPLRENKRVPLTALLNQAHNDRRGPTSDSHEALEKEVQSL
                     RAQLEAWRLRGEAPQNAPRLQEDSHIPPGYISQEACERSLAEMESSHQQVMEQLQRHH
                     ERELQRLQQEKEWLLAEETAATASAIEAMKKAYQEELSRELSKTRSLQQGPESLRKQH
                     QLDMEALKQELQVLSERYSQKCLEIGALTRQAEEREHTLRRCQQEGQELLRHNQELHS
                     HLSEEIDRLRSFIASQGTGNSCGRSNERSSCELEVLLRVKENELQYLKKEVQCLRDEL
                     QVIQKDKRFTGKYQDVYVELNHIKTRSEREIEQLKEHLRLAMAALQEKEAVRNSLAE"
ORIGIN      
        1 ctggtagcgc gggcgaaacg tgctgtgcat cccgcgcggc aaggcgcctg ggcaccgccc
       61 gcctctgccc cgcccctagt cctcggtgtg tccagtcgca cactgaccat gcaaatgaag
      121 ctcttaggga gagcctattg gagtgaggga ggggcgtggt ctatcacgca agtcctgggc
      181 cgcgttttga ttcattgtta aaatagaggc tgtgactctg gcaccagttc ctccgccgcc
      241 cggagagtgg aaacccgagt ccaggtcaga accccgcggc tagcggaact aagctggctg
      301 gaaaggggag gccagaggag ggaagatttc tgccagttgg ctggggggag tcgtgaagga
      361 aactggagtc ataaggggca cacgaagagc ccccgtttag cttccctgga aaaggagcta
      421 cgttctctat ccaagaggat gctcttctcg gtggctggac cagaaaagaa cagcccaggc
      481 cccacctaga gaaccagcca ctgtggcttc cctgctatgg aggaagtggc tatgaatatc
      541 ccaagtatac aacctgaagc cagtgtatct gccaagaacc actgtctgag ctgctgtcac
      601 cctggggatg tccatggagc aagacaccag agcactgctg cccacccagg gcactgcctg
      661 ggctacagcc tctgccccag tcgccagact ccagggtccc cagggagact cccaccaggc
      721 ctgctctcag gagcctcaca gcccttccag tgctgaggca ccctactgcg acctgcctcg
      781 ctgcccaccg gccctgcaga acccactccg caccaccacc tgtgtcggcc agtctgtgca
      841 cagccttggt ctcggccttg ggcaggagcc tcagagggtc tggtccccaa caacagctct
      901 ccctgcagag ggccctgcag ctgccccaaa gaacagacac caggactccg aggggatacc
      961 ctatctggag ggcctggccc gtagcagctg cactgacgac aacgacaaca aggacgaaga
     1021 cgaggaccct aactccaaca ccagctccag ccaagacagc aatacccctc atgataccag
     1081 caattcctct tctgtgcagg attgggacac tactgagaga ccaggggtgg tccccagcag
     1141 gaacagactc acagagatga tcccaaggag gcctcaggag ggactgagag ctgacagtgc
     1201 tcgaaaggcc accaggtccc cagcccgagg agacacagca ggccagagga aggagaattc
     1261 tggcagtggt ggacagagcg ctggccagca ctgggcaaag ctgcgatcag aaagcggcta
     1321 cttctctctg gagcgacagc gctcagggca aacccaggct tcctccggga caccaccgag
     1381 cggacctcgg ggcaccaccc aggcttcttc tgcccaaagg gatgttttcc aggctgctcc
     1441 tgcacaagaa gctccccaaa cctcctctct gccccgaaac acccaaaggg acacacagcg
     1501 gagcacccct agaacctcct ctccttccag agtatcccag cgggacactc ccagagtcat
     1561 gtccacccag cggaagaata ctcctctttc ctctcccctc agagccactc cagagaccct
     1621 aaagatctct gcaccagaag atggcaccca tgttacacca tctccatgtg tccaagactc
     1681 ctctctcaac agaaccagcc agcgggacag ctctagaact ccctgtatcc agtgggacaa
     1741 tcccagggcc tcctctccca acagaactac tcagcgggac aaccctagga ctccctgtac
     1801 ccagagggac aatcccaggg cctcctctcc caacagaact actcagcggg acaaccctag
     1861 gactccctgt acccagaggg acaatcccag ggcctcctct cccaacagaa ctactcagag
     1921 ggacaacccc aggactccct gtgcccagag ggacaatccc agggctgctt ctcccaacag
     1981 aagtactcag cgggacagcc ccaggactcc ctgtgcccaa cgggacaatc ccagggcctc
     2041 ctctcccaac agaactgccc agcgagacaa ccccaggact ccctgtgccc agcgggacaa
     2101 ccccaggacc tcctgcacat cacagaatac ccccaggacc ccttctaccc aagcagataa
     2161 gactacagct tcctgcagca aatgggagca tctgcgaagc gcctgcaccc agcgagacaa
     2221 ccccaggacc ttctctcaag gctgcaccca aaaggacaat ccaggaccac cctcgccccg
     2281 ccgtgccact caggggagta attccaggaa cccttccccc caccgtacca acaaagatat
     2341 cccttgggct tcctttcccc ttcggccaac acagagtgac agtccccgaa cctcatctcc
     2401 atcgcgcacc aaacaaaacc aggtgccttg ggcatccatt tctctccggc caacccaagg
     2461 ggacaagcct cagacctcag ctcctaccag gctagctcac aatgaccctc cccagcagta
     2521 ttcgccatcc ctggccacca cctcctcctc ctctcataac cctggccatt ccagtgcctc
     2581 taggacttca tcgcctcttc acgcagcacc tcgaggggct ccccagacct ctttggagtc
     2641 ctctcagcca ccctgcactg tgtgcatcgg gcaccgggac gcacctcgcg cctcttcccc
     2701 acctcgctat tttcagtacg accctttccc cttcttccca gatccccgct cgtctgagag
     2761 tgaatcgccc caccacgaac ccccctacat gccgcctgca gtgtgtattg ggcaccgtga
     2821 tgccccccgg gccacttcgc cacctcgtca cacccagttc gatcccttcc ccttcctccc
     2881 agacacatca gatgctgata atgagtcccc gcagcacgac ccccctcagt ttcccccacc
     2941 agtgtgcatc gggtaccgcg acgctccgcg ggcctcttcc ccaccacgcc agttcccaga
     3001 gccctccttc ttccaagatc tccccagggc cagcacagag agccttgtcc cttccacaga
     3061 ctctatgcat gagccgcccc acattcccac tcctgtatgt atcggacaca gagacgctcc
     3121 ctccttctcc tccccgccac gccaggcccc cgagccttcc ctcttcttcc aggatcctcc
     3181 tgggaccagt atggagagtc ttgctccttc cattgactct ctgcatggct gcccactgct
     3241 gcccccccaa gtttgcatcg gccatcggga tgcacccaga gcctcctctc ctccccgcca
     3301 cccacctagt gacataggtc tcctggcacc ctcacctcca ccaggtagct cgggctcccg
     3361 gggctcagca cccccagggg agaccagaca caacttggag agggaggagt acaccatgct
     3421 ggctgacctg cccccaccca ggaggctggc tcagaggggg ccagagcccc aggcacaggg
     3481 cagcaacgag ggccgtaccc gcagccctgg ccgagcagag gtggagcgcc tcttcgggca
     3541 agagcgcagg aaatcggagg caccgggggc cttccagact cgggatgagg gacggtcaca
     3601 gcggcccagc caagctcaga gccaacttcg aagacagtcc agccctgccc ccagcaggca
     3661 ggtgaccaag ccctctgcca agcaggcaga gccaacccgg cagagccgaa caggaccgcc
     3721 acatcctaag agtcctgaca agcggcctga gggagaccgg cagctccaga ggacctcacc
     3781 acctgccagg acaccagcca ggccccctga gagaaaggct cagatagaga ggcatctgga
     3841 gagtggccac actggcccga ggcagtctct gggagggtgg cagagccagg agaggctgtc
     3901 aggacctcaa agtcctaaca gacacccaga gaagagctgg ggcagccaga aagagggccc
     3961 aagcctgggg ggttggccgg aacttgaggg tcccagcctg gaggggatat ggaggggtcc
     4021 tccccaggag cacagggaac agtggggaca ttcagaggcc tgggaggagc ctcccagtaa
     4081 tgggatacag ggggctcccc caaggggcca aggtagactt caggagctgt ccagacccca
     4141 ccagcctacg ccttcctcag agaactcctg ggcaggccca gcagagtgtt cgtgtgccct
     4201 gcagcctgag gccagcactg ctgtgggctg gagggccgag ggaacatccc cacatcagcg
     4261 tagtgctgag aggccacccg acctagattg gagggacctg ctaggccttc tccgggcacc
     4321 tgaggatggg gcctggaccc ggctcccaag gctggactgg gaaggcctcc tggagctcct
     4381 gcaggctcgg ctgccccaaa aggacccggc taggcactgg catgacccag ccaaggcttc
     4441 aggaccagag cagggttcct caggcacaga ggataccctg aagacagagc cgcagaccca
     4501 gcctgaagga cgggccaagg ccaccctagc caatggacac aggcctggtc agcagtctga
     4561 gagcccagca cagctaccca gccctgcctg tacctccacc cagtggccaa ccaccaaagt
     4621 gacaagcgga ccagaaacgt cacctctggc tgctctggag cagatagatc acctagagag
     4681 ccacagccca ccggacctgg agttccagcc agaggaacct gaggcatcag aaccaagccg
     4741 aggcgaagac tcacgggctg tccagaagca ggctgactcg gcagacaaga ggccggcaga
     4801 gggcaaggct gggagcccac tcaagggccg actggtgact tcatggcgga tgcccgggga
     4861 ccggcccgcg ctgttcaatc catacctgct gtctctgggg gtcctcaggt ggcaaaggcc
     4921 cgatctgctc aacttcaaga aaggatggat gtcaatcttg gatgagcctg gagagtggaa
     4981 aaagcattgg tttgtgctga cggattcaag cctcaaatat tacagagact ccacggctga
     5041 ggaggcagat gagctggacg gtgagatcga cctgcggtcc tgtactgacg tcacagagta
     5101 tgcggtccag cgcaactatg gcttccagat ccacaccaag gacgccgttt ataccctgtc
     5161 ggccatgacc tcgggcatcc ggcggaactg gattgaggct ctcaggaaaa ctgtgcggcc
     5221 aacttcagcc ccagatgtca ccaagctctc cgactgcaat aaagaaaaca cgctgcatgg
     5281 ctatggcacc cagaagagct ccctgaagat aggggagcag cggacaggct ctgaggttat
     5341 cggccggggt ggtcctcgca aggcggatgg accacggccg tcactggact acgtggagct
     5401 ctctccatta gcgccaagct ccccacagcg catgcgcact ctctcccgct ccactcccga
     5461 gcgccccacc aagcaggagg atctggagcg ggacttggcc caacgctctg aggaaagacg
     5521 caagtggttc gagtccacgg acggcaggac cccagagacg cccagtggcg atgggtctcg
     5581 aaggggcctg ggtgcccccc tgactgatga ccagcagagc aggctcagtg aggagattga
     5641 gaagaagtgg caggagttgg aaaagctgcc cctgcgggag aacaagcgag tgccactcac
     5701 cgccctgctc aaccaagccc acaacgatcg tcggggacct acaagtgaca gccatgaggc
     5761 cctggagaag gaggtccagt ctctccgtgc ccagctggag gcttggcgtc tccgagggga
     5821 agctcctcag aatgcaccga gactccagga ggacagccat atccccccag gctacatctc
     5881 gcaggaagcc tgtgagcgca gcctggcaga gatggagtcc tcacaccagc aggtgatgga
     5941 gcagctgcag cggcaccatg agcgagagct gcagcggctg cagcaggaga aggagtggct
     6001 cctggccgag gagacggctg ccacggcctc agctattgaa gccatgaaga aggcgtatca
     6061 agaagagcta agccgggagc tgagcaaaac ccggagtctc cagcagggcc cagagagcct
     6121 tcggaagcaa caccagctgg acatggaggc gctaaagcag gagctgcagg tgctatctga
     6181 gaggtactcg cagaagtgcc tggagatcgg ggccctgaca aggcaggcag aagagcgtga
     6241 gcacaccctg cggcgctgcc agcaagaggg ccaggagctg ctgcgccaca accaggagct
     6301 gcactcccac ctgtccgagg agatcgaccg tctgcgcagc ttcatcgcct cgcagggcac
     6361 aggcaacagc tgcgggcgca gcaatgagag gagttcctgt gagctggagg tgctgctgcg
     6421 agtgaaggag aatgaactcc agtacctgaa gaaggaggtg cagtgtctcc gagatgagct
     6481 ccaggtgata cagaaggaca agcgcttcac ggggaagtac caggatgtgt acgtggagct
     6541 gaaccacatc aagactcggt cggagcgtga gatcgagcag ctgaaggagc acctgcgcct
     6601 ggccatggct gccctgcagg agaaggaggc tgtgaggaac agcttggctg agtagaggtc
     6661 cctgtggttc cgatcagctg aggaccctcc agccccaggg gaccagccac cctccttctc
     6721 tggcagaagt cagaagccaa gctttctccc caccctgggt cacatgtgca ctcacaccac
     6781 acacacccac acacacacgc acacatacac acacacacac acacacacgc atatgcacac
     6841 acatgcacac acacatacac gcacacacat gcacagacac tgcggatctg agctcgtccc
     6901 ttgcacaggg tctttacctt gcaccttctt caggatttta tatgtgaaga gatttttata
     6961 tagatttttt tttttgcctt tttttttttc taaaacattt aaacttttta aaaaggcaat
     7021 ttcttggtgg cgtgtgcctc aagcactggc ttctctccct cttgtcccct gcttggccct
     7081 ccttcctacc tgggtgtctc acaaaggccc aaggagagcc agggtgagtc aaccagaggg
     7141 aaaaggcagc cctcagttcc ctgccctggc ctctgggcag agggaggagc cagtggctgg
     7201 ccccatatcc actcctctga ggggcgctgg gcgtgggcca ccagcgccac cagcgccacc
     7261 catgaagaca cttctcttct gttccgtgag tcaccctaac ttaataaaac cttccggcaa
     7321 ctctg
//
