LOCUS       NM_020267               5908 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Mus musculus tripartite motif-containing 44 (Trim44), mRNA.
ACCESSION   NM_020267 XM_973004
VERSION     NM_020267.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5908)
  AUTHORS   He,H., Cai,T., Chen,Q., Chen,Z., Zhang,B., Chen,C., Wang,Y.,
            Liu,Y., Wang,Y., Luo,Y., Huang,S., Luo,J. and Guo,X.
  TITLE     TRIM44 Promotes Rabies Virus Replication by Autophagy-Dependent
            Mechanism
  JOURNAL   Int J Mol Sci 25 (9), 4616 (2024)
   PUBMED   38731834
  REMARK    GeneRIF: TRIM44 Promotes Rabies Virus Replication by
            Autophagy-Dependent Mechanism.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5908)
  AUTHORS   Wu,L., Jia,M., Xiao,L., Wang,Z., Yao,R., Zhang,Y. and Gao,L.
  TITLE     TRIM-containing 44 aggravates cardiac hypertrophy via
            TLR4/NOX4-induced ferroptosis
  JOURNAL   J Mol Med (Berl) 101 (6), 685-697 (2023)
   PUBMED   37119283
  REMARK    GeneRIF: TRIM-containing 44 aggravates cardiac hypertrophy via
            TLR4/NOX4-induced ferroptosis.
REFERENCE   3  (bases 1 to 5908)
  AUTHORS   Bai,J., Liu,X., Zhang,S., Dang,S., Zhang,Y. and Zhang,G.
  TITLE     Expression of TRIM44 and its correlation with TLR4 in laryngeal
            squamous cell carcinoma
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 68 (6), 56-61 (2022)
   PUBMED   36227676
  REMARK    GeneRIF: Expression of TRIM44 and its correlation with TLR4 in
            laryngeal squamous cell carcinoma.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 5908)
  AUTHORS   Chowdhury,R., Laboissonniere,L.A., Wester,A.K., Muller,M. and
            Trimarchi,J.M.
  TITLE     The Trim family of genes and the retina: Expression and functional
            characterization
  JOURNAL   PLoS One 13 (9), e0202867 (2018)
   PUBMED   30208054
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 5908)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 5908)
  AUTHORS   Urano,T., Usui,T., Takeda,S., Ikeda,K., Okada,A., Ishida,Y.,
            Iwayanagi,T., Otomo,J., Ouchi,Y. and Inoue,S.
  TITLE     TRIM44 interacts with and stabilizes terf, a TRIM ubiquitin E3
            ligase
  JOURNAL   Biochem Biophys Res Commun 383 (2), 263-268 (2009)
   PUBMED   19358823
  REMARK    GeneRIF: terf interacts with TRIM44;TRIM44 inhibited ubiquitination
            of terf, and thus stabilized the protein.
REFERENCE   7  (bases 1 to 5908)
  AUTHORS   Desai,J., Shannon,M.E., Johnson,M.D., Ruff,D.W., Hughes,L.A.,
            Kerley,M.K., Carpenter,D.A., Johnson,D.K., Rinchik,E.M. and
            Culiat,C.T.
  TITLE     Nell1-deficient mice have reduced expression of extracellular
            matrix proteins causing cranial and vertebral defects
  JOURNAL   Hum Mol Genet 15 (8), 1329-1341 (2006)
   PUBMED   16537572
REFERENCE   8  (bases 1 to 5908)
  AUTHORS   Boutou,E., Matsas,R. and Mamalaki,A.
  TITLE     Isolation of a mouse brain cDNA expressed in developing neuroblasts
            and mature neurons
  JOURNAL   Brain Res Mol Brain Res 86 (1-2), 153-167 (2001)
   PUBMED   11165382
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL691444.9.
            
            On Nov 8, 2022 this sequence version replaced NM_020267.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC045602.1, SRR1660811.7711.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1184              AL691444.9         125619-126802       c
            1185-1262           AL691444.9         106470-106547       c
            1263-1502           AL691444.9         83023-83262         c
            1503-1522           AL691444.9         72570-72589         c
            1523-5908           AL691444.9         25725-30110         c
FEATURES             Location/Qualifiers
     source          1..5908
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 54.13 cM"
     gene            1..5908
                     /gene="Trim44"
                     /gene_synonym="Dipb; Mc7"
                     /note="tripartite motif-containing 44"
                     /db_xref="GeneID:80985"
                     /db_xref="MGI:MGI:1931835"
     exon            1..1184
                     /gene="Trim44"
                     /gene_synonym="Dipb; Mc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1185..1262
                     /gene="Trim44"
                     /gene_synonym="Dipb; Mc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1263..1502
                     /gene="Trim44"
                     /gene_synonym="Dipb; Mc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1503..1522
                     /gene="Trim44"
                     /gene_synonym="Dipb; Mc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1523..5908
                     /gene="Trim44"
                     /gene_synonym="Dipb; Mc7"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5885..5890
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trim44"
                     /gene_synonym="Dipb; Mc7"
                     /note="hexamer: AATAAA"
     polyA_site      5908
                     /gene="Trim44"
                     /gene_synonym="Dipb; Mc7"
                     /note="major polyA site"
ORIGIN      
        1 ggggcccgtc gccctgctct gcgaggagag attgcgctcg agcttctcct tccggggggg
       61 atgctcagcc ccgcgggaaa acgcagaaaa gggtccttgc cgctttaagt gactcaggaa
      121 gtgaaaggag gccgctgacg gcgtgggtaa agtggaaccg gggcggcgtg ggcccgcggc
      181 ggccgcgatc ttgccgggca acggaggccg ggttgcgcgg cgcaggggcc gacggggcgc
      241 aggctgccgc gccggaagtg gcgcgcgagg gacggggcgc gggcgcggcg cgcggcgaag
      301 agaccgagcg ggcgccaggc ccagcgctga cggctggccg ggccctcagg cctcagcagc
      361 tgcagacgcg gcgcggcgca gcgcagcggc gcggcccagg cggggcggcc ggccagaccc
      421 cgggggtaag cgggcctgcg tgaggaaggc gctccgcgct gaaggcggag agcacgccag
      481 ccgctaggcc tcggcctcgt ccctgcagcc acatggcctc cggagtgggc gcggcctgcg
      541 aggagctgcc tcccgacggc acgtgtgacg agtgcgaacc cgacgaggcg cccggggcgg
      601 aggaggtgtg ccgcgactgc ggcttctgct actgccgccg ccacgccgac gcgcatcgcc
      661 agaagttcct cagccaccgc ctggctgcct acgtccatgg cgcccaggcc tggactccgc
      721 cggccagcgg gggagacgac gcgctccccg aagacggcga ggccaaaggg gaggccgagg
      781 gggaggtaga gagcgaggtc ggggaagaag agagcgagac ggaggtagac agtgagtcgg
      841 aagaagagag cgagaccgag gaagacagtg aggatgagag tgacgaggag agtgaagaag
      901 acagcgagga agagatggag gatgagcagg agagcgaggc ggaggaagac aaccaagaag
      961 gggaatcaga ggcagaagga gaaactgagg cagaaagcga atttgacccc gaaatagaga
     1021 tggaagcgga gagagtggcc aagaggaagt gtccagacca tgggctggat ttgagcacct
     1081 attgtcagga agataggcag ctcatctgtg tcctgtgtcc agtcattggg gctcaccggg
     1141 gccaccagct gtccacgctg gacgaagcct tcgaagaact gagaagcaaa gattccggtg
     1201 gactgaaggc agcaatgata gagttggtgg aaaggttaaa gttcaagagc tcagacccta
     1261 aagtaactcg agaccagatg aagatattta tacagcaaga atttaagaaa gttcagaaag
     1321 ttattgctga tgaggagcag aaggcccttc atttagtgga tatccaagaa gcaatggcca
     1381 cggctcatgt gactgagata ttggcggaca tccaatctca catggatagg ttgatgactc
     1441 agatggccca ggccaaggaa caacttgata cctctaatga atcagctgag ccaaaggcag
     1501 agggtgacga ggaaggaccc agcggtgcca gtgaagaaga ggacacatga agacttagca
     1561 ttccctgcag aaaacgcccc ttccccgtgt gtgtgtgaca gcgtgtatgt aatggcttct
     1621 gatatctgtg aaagctgcca ggcaacaaac ttcttctact ggaaatgtcc ccagatccac
     1681 agcaggcaca catgttccca agggaccagg ggttgtatgc attctgactg tgtgcttctt
     1741 gttctctgtg gtaggtcatg ggaagagccc ttttgatcaa cttggagggc tcttcagcta
     1801 accccccaat ggctgctttg aacttactca ggaaagccag cccctggaat attgtgcaag
     1861 tcaacactat cacttcctta ggaaggttct agaacatctc gaaaggatat cagttttcct
     1921 tacctgcaaa cagaaaacaa acccactttg tttgtactga agcttaaagc aaatgtggcc
     1981 aagtggggcc aaactgactc aataggcagt ctgtcatagt ccagttctgc ctctgtgaaa
     2041 agtgttaggg caactgggtt aaaatagggt tggagaaaga gtccagagct agaaagaaga
     2101 tatttttagt atgtgaggtt atctaggact taagtttcat aattcagtgc tgtggaaatg
     2161 ggaaaatgat tgaaaaggta gaaaggaaat gaccttaagg actggggtga ggcacagaaa
     2221 tctgattaaa ggttgaaatc agtgtttcag aattcagatt gcctcaattt tccaaaatgg
     2281 tcactaaagc atctgataaa acccagaatt cttcggccag ctgtgtggat taacaggcct
     2341 gtcacaacat aaaaggctgg catgtatatt ggcaggtgga gattgtcact gtaaaactta
     2401 gcagtttcac tccgaggtta gtctatggtg gtcagtgcac tgtgagggga atccttgtcc
     2461 ctccctggca gctagcaaac attcctctat ttactataat tggaatcctc ccttcccctg
     2521 cagcaggccg tcagctcacc tcacacagcc cagttttctc ttcatgtagc atgtccaggc
     2581 atgctccaga gctgggtttc ctggccttcc cacactccca gatcacagtc tcttacaacc
     2641 atgcttttca ggatccagga agtagtaagt gtgctgggag atacccaact aactgcaagc
     2701 tcacaagcac cacatcttct tgagacatca gtttttcttt ccaaatgatt tgaagtcaag
     2761 agatgaccat attttttaat ggaacaaatg cttatgttat acaagagaat gttcatacac
     2821 ctaaagtgct aaactaaaat aggaaacttg gaaggaaact catatttgta agtggacagt
     2881 gattctatct cctctgcttg tgtggtattt ccatgttcac tttgagattt tgtctgaact
     2941 ggattcaggc agccttgggg ttgctgttga tcaaggtcta gacttccaga tccaaggagt
     3001 ccaccttgga gtagtacatc tcccttttcc tgtcagccag cttgcctgtg tacttatcac
     3061 aaagctttag gggcagctaa catgtgtatg tacaggatag ttctgaggca gaaacagcat
     3121 agacttattg taggagtcct atttatgtca ttgttcagcc ctgtgcatgc tagaaaatga
     3181 tttatccctt tgaggccagg aaactgccaa gccactctgc tgtaggctag gattactgaa
     3241 actcaccaca catacaagga tattggggca gagcggagtg tgagatctaa aaatatgtat
     3301 actttcccca gctggtggct agtagatggc ttagacaatt ttggtgtctt accatctgtc
     3361 tgcaaagact ggagaattta atacatcttg agttgacaac ctccagtgat atcctgttct
     3421 gccaaaattt taaaagaagg gccactgtag aaagagtgta aactatcaca agattgaaaa
     3481 gacttgacag tttggaagct tgtcttgtct ttctcagtaa tcattgatct ttacatgttg
     3541 accttatatt agcaatgaac agatcattgc ctctccaccc aatcatgcta tttctttaaa
     3601 tcagtatttg gggaatgcaa gcatttatgc agtggttata aacagaaata taagatttgc
     3661 caacctgtct ctttaaatta ccatctctct gaaatcctca aggaaagcat tttcccttta
     3721 cttagtaagg gtttcagatt cactttatgg gctcctgctg tcttcaacac tgataaaact
     3781 ttaaccagaa aagcattaaa cacagcacag cagcccctag cccagatccc taagttccta
     3841 gtggcagcat ttatcaatgt aagaacaaga atactttctg tactggtatc agcttcgtcc
     3901 tcaaagctat gacctcttac ttggccttgt gccccatagt gaacgaagct tcttgccttt
     3961 ccaggtcagt gtgagttaag attgtcagag ttgtatgtgt cctgacagac tgtggacagc
     4021 agggtttgcc caaatcatca agtgatacag gtaatgaatg tctctaaaat aagttgggtc
     4081 ctccaaacaa gtcctggata ccttctgaat gttaagtttc tgagtgctga gagtaatttg
     4141 ttcattggtt tggtttgata ccgttatatc tatctagggc agttccaaga agtgcttgac
     4201 ttctcagctc taacagccag taagagtaag taaccttagt acaggcaatg agcctctgta
     4261 gatgtgcaga ggacaagtca cttgtctgta gttgctaaca aacaatggaa ccagttttga
     4321 gcacagcact ccctgctctg cagtcagccc tctgccccac accatgactc acctacagat
     4381 tgagagagag aaaggctttc agttccccca gtgtagtatg cccattcaca ctcggaattc
     4441 tttttcaaag acatcaagat ggccttagta ctctgctcta gtagatgttg taagtattca
     4501 ttgttccttc caggagctgg atttttggta cagtccccac aaaggaaaat aaaggccttc
     4561 aagagtgtaa agtttttaga cagagttgga ggtaatggta gtcttctaac attatctaaa
     4621 tatctcctgc ttcattacta tagaaagcaa ctcttcatgt tttaggaaac ccagctacca
     4681 tgtttgtact ctgagaaggt gccaatacaa atcactaatt ttggactccc ttcctggagt
     4741 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtaaatga
     4801 gaatgagatt tgtacacacc cacatattct ataccactta attaagagtt aagtgaagtt
     4861 caaagcagcc cctggtgatc ttacttaaca ccacaaagtt ttctactagg tccatgaaag
     4921 tataaacaga taattggagt gtgactgctg gctttccaga ataacccact tgtggtagat
     4981 gtcaactctt acagctccaa gccaaggtga cgacaaccca gccctcttcc accatgtcta
     5041 ataacatggg acatggtaga tgccttgtca tttggtgacc tggatctggg cccgagttta
     5101 gagctgcaga atttataacc ttgtagtagt cagtggtcta agaagtcctc tctccccaca
     5161 gagaaaatgt cttgctgatt cctgatattc tactctcata agctgttcag tacacacttc
     5221 tcagtcaatt ggttgcttgt ttactatgtg ctgagcacat ctagattttt tgtttgttta
     5281 aagttaaaag tcccattata aatcaagtct aaccctgccc taagagaaaa gacccacaga
     5341 gactgcacat ctcactgacg ctgccttcac ccattagtgt ttgaggccca ccatcctatg
     5401 gagccaggta ttcccacatc attcagatca ctggtgtttc ccattactgt ttgaggctga
     5461 gcagaaacac taacaaggac cagagcagga acgggaaaat aaatgaagac acttggagtg
     5521 cactgttgag aaaatagcca gagtccatgc tgggcttgat gtggctttag gggaccaatc
     5581 atatatactt tatggaagtt aaacctgacc agtctttaca gtgacaggcc acagcgcgtg
     5641 agtgggtaga accaacaaat ccattgtctt ctgcctgttt ttgtgtgcac agtcacattc
     5701 cctccttagt catcttcccc ttccactctt tacactaaac aagggaacac tcaatctttc
     5761 aagggaatta catatctgag ttaatgtttc agtatatcat tttcatactg taaattattt
     5821 tgtaagagag atttactgct atcccaggat gttcggactt ggcgcccctg tgcatttgga
     5881 aatcaataaa ctattactgg aaatacca
//
