LOCUS       XM_011249157            2307 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus tripartite motif-containing 17 (Trim17),
            transcript variant X2, mRNA.
ACCESSION   XM_011249157
VERSION     XM_011249157.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011249157.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2307
                     /gene="Trim17"
                     /gene_synonym="Rnf16; terf"
                     /note="tripartite motif-containing 17; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 8 ESTs, 19 long SRA reads, 9 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:56631"
                     /db_xref="MGI:MGI:1861440"
     CDS             714..2147
                     /gene="Trim17"
                     /gene_synonym="Rnf16; terf"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase TRIM17 isoform X1"
                     /protein_id="XP_011247459.1"
                     /db_xref="GeneID:56631"
                     /db_xref="MGI:MGI:1861440"
                     /translation="MDAVELARRLQEEATCSICLDYFTDPVMTACGHNFCRECIQMSW
                     EKGKVKKGKKKQKGSFPCPECREMSPQRNLRPNRLLTKVAEMARQHPGLQKRDLCQAH
                     QEPLKLFCQDDQSPICVVCREAQEHRMHRVLPLDEAAREYKLKLEEDIKYLREEMMKT
                     ETLQAKEEQTLTEWQERVKERRERILEEFQKVVLFLVEEERRILQVLKKEEEDTLGKL
                     QDSKASLDHQSRSLDLILLQLEERSQQEPLQMLQDVKDTLNRKESFSVQYPEVVLPAA
                     IKTLCRVPGQIEVLKSFQEDVMPDPSSAYPYLLLYESRQRRYLSPPPEGSAPYSKDRF
                     VAYPCAVGQKSFSSGRHYWEVGMNLTGDALWALGVCRDNVSRKDRVLKSPENGFWVVQ
                     LSKGKKQLSLLPNSTLVTLTEPPSHMGIFLDFQAGEVSFYSVNDGSHLHSFSQAAFPG
                     PLLPFFCLGAPKSGQMVISTVTMWVKG"
ORIGIN      
        1 gttttcgcta ggtttctttt ctgtttttgc gtacttttgg ttatcagtgg aagatgtctg
       61 gtcgtggcaa gcagggcggc aaagctcgtg caaaagcgaa gtctcgttct tcccgtgccg
      121 gcctgcagtt tccagtgggc cgtgtgcacc gccttctccg taagggtaat tattcggagc
      181 gggtcggcgc tggtgccccg gtgtacctgg cggctgtgct agaatatctg actgctgaga
      241 tcctggaatt ggctggtaat gcggcccgcg acaataagaa gacgcgaatc atcccgcgcc
      301 acctgcagtt ggccatccgc aacgacgagg agctcaacaa gctgctgggc cgcgtgacca
      361 tcgcgcaggg cggcgtcctg cccaacatcc aggccgtgct actgcccaag aagaccgaga
      421 gccaccacaa ggccaagggc aagtgaggcc cctaccggtc gttagtgcga cttttacaga
      481 caccaaaggc tcttttcaga gccacccaca acctcattag aaagcgctgt acactgagcc
      541 tgtcgccagt tactggccag gccagttctc ctgactcctt ccgtgcattc ctgcatccct
      601 gtgcggcgct tggggagctc aagggagacc aacggcttca tctgcgggtg gcctgcgggc
      661 cgttggaggc gttcgagttt ctccccacca ctccgtgtca gacacaagga gccatggatg
      721 cggtggagct tgccagacgg ttacaagagg aggccacatg ttccatctgc cttgactact
      781 ttactgatcc tgtgatgact gcctgtggcc acaacttctg cagagagtgc atccagatga
      841 gctgggagaa ggggaaggtc aagaaaggga agaagaagca gaagggctcc ttcccctgcc
      901 ccgagtgcag ggagatgtcc cctcagagga acctgaggcc caaccgcctc ctgacaaaag
      961 tggctgagat ggcccgccag caccctgggc tgcagaagcg agacctgtgc caagcacacc
     1021 aagaacccct taagctgttc tgccaggatg accagagccc catttgtgtg gtctgcaggg
     1081 aggcccagga gcaccggatg cacagggtgc tgcctctgga tgaggctgca agggagtata
     1141 agctcaagtt ggaggaggac ataaaatatc tacgggagga gatgatgaag acggagacac
     1201 tgcaagccaa ggaggaacag accttaactg agtggcagga gagagtgaaa gagcggagag
     1261 aacgcatcct ggaggagttt cagaaggtgg tcttgtttct ggtggaagaa gaacggagga
     1321 tcctccaggt cctgaagaag gaggaagagg acaccttagg gaagctgcag gacagcaagg
     1381 cctccctgga ccaccaaagc cgctccctgg acctgatcct gttgcagctg gaggagcgga
     1441 gccagcagga gcccctccag atgctgcagg atgtgaagga caccttgaac aggaaggaga
     1501 gcttcagcgt gcagtaccca gaggtggtcc tccccgcggc tatcaagacc ttgtgcagag
     1561 ttccaggaca gatagaggtg ctcaaaagct tccaagagga tgtgatgccg gaccccagct
     1621 cagcataccc ctatctcctc ctctacgaga gtcgccagag gcggtacttg agcccaccgc
     1681 ccgagggcag cgccccctac agcaaggacc ggttcgtggc ctacccgtgc gctgtggggc
     1741 agaagagctt ttcctctgga aggcactact gggaagtggg catgaatctc accggggatg
     1801 cactctgggc cttgggggtg tgcagggaca acgtgagtcg gaaggacaga gtgcttaagt
     1861 ccccagaaaa cggcttctgg gtagtgcagc tgtccaaggg gaaaaaacag ctgtccctgt
     1921 tacccaattc cactctagtc actctcacag agcctcccag ccacatgggg atcttcctgg
     1981 acttccaggc tggagaggtg tccttctaca gcgtgaacga tgggtcccac ttacacagct
     2041 tttcccaggc tgccttccct gggccgctgc tgccattctt ctgcttgggg gctcccaagt
     2101 caggccagat ggtcatctcc acagtgacca tgtgggtgaa gggatagagg cttgaagccg
     2161 ggcagacact gggtgtgcca cagttcccca gaaggcaggg tgcttcacca ccgtggccac
     2221 ctacccaggc ttccctgggg cactaagagt taatacctgt gctggcaggg taactgaaat
     2281 acagtcaaga ttcaaatgct caagtga
//
