LOCUS       NM_025701               2072 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus trafficking protein particle complex 5 (Trappc5),
            mRNA.
ACCESSION   NM_025701
VERSION     NM_025701.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Kim,J.J., Lipatova,Z. and Segev,N.
  TITLE     TRAPP Complexes in Secretion and Autophagy
  JOURNAL   Front Cell Dev Biol 4, 20 (2016)
   PUBMED   27066478
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Menon,S., Cai,H., Lu,H., Dong,G., Cai,Y., Reinisch,K. and
            Ferro-Novick,S.
  TITLE     mBET3 is required for the organization of the TRAPP complexes
  JOURNAL   Biochem Biophys Res Commun 350 (3), 669-677 (2006)
   PUBMED   17027922
REFERENCE   3  (bases 1 to 2072)
  AUTHORS   Kim,Y.G., Raunser,S., Munger,C., Wagner,J., Song,Y.L., Cygler,M.,
            Walz,T., Oh,B.H. and Sacher,M.
  TITLE     The architecture of the multisubunit TRAPP I complex suggests a
            model for vesicle tethering
  JOURNAL   Cell 127 (4), 817-830 (2006)
   PUBMED   17110339
REFERENCE   4  (bases 1 to 2072)
  AUTHORS   Yang,R.Z., Huang,Q., Xu,A., McLenithan,J.C., Eisen,J.A.,
            Shuldiner,A.R., Alkan,S. and Gong,D.W.
  TITLE     Comparative studies of resistin expression and phylogenomics in
            human and mouse
  JOURNAL   Biochem Biophys Res Commun 310 (3), 927-935 (2003)
   PUBMED   14550293
  REMARK    Erratum:[Biochem Biophys Res Commun. 2003 Dec 19;312(3):866. Eison
            Jonathan A [corrected to Eisen Jonathan A]]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK076212.1, AK078451.1 and BC028946.1.
            
            On Sep 14, 2007 this sequence version replaced NM_025701.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049179.1, AK076212.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1489              AK076212.1         2-1490
            1490-2017           AK078451.1         1456-1983
            2018-2072           BC028946.1         2478-2532
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 1.92 cM"
     gene            1..2072
                     /gene="Trappc5"
                     /gene_synonym="4021401A16Rik; TRS31"
                     /note="trafficking protein particle complex 5"
                     /db_xref="GeneID:66682"
                     /db_xref="MGI:MGI:1913932"
     exon            1..127
                     /gene="Trappc5"
                     /gene_synonym="4021401A16Rik; TRS31"
                     /inference="alignment:Splign:2.1.0"
     exon            128..2034
                     /gene="Trappc5"
                     /gene_synonym="4021401A16Rik; TRS31"
                     /inference="alignment:Splign:2.1.0"
     CDS             137..703
                     /gene="Trappc5"
                     /gene_synonym="4021401A16Rik; TRS31"
                     /codon_start=1
                     /product="trafficking protein particle complex subunit 5"
                     /protein_id="NP_079977.3"
                     /db_xref="CCDS:CCDS22070.1"
                     /db_xref="GeneID:66682"
                     /db_xref="MGI:MGI:1913932"
                     /translation="MEARFTRGKSALLERALVRPRTEVSLSAFALLFSELVQHCQSRV
                     FSVAELQARLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEA
                     DKLEQANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKV
                     TAHWHKGTTLMIKFEEAVIARDRALEGR"
     regulatory      714..719
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trappc5"
                     /gene_synonym="4021401A16Rik; TRS31"
                     /note="hexamer: GATAAA"
     polyA_site      742
                     /gene="Trappc5"
                     /gene_synonym="4021401A16Rik; TRS31"
                     /note="major polyA site"
     regulatory      2015..2020
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trappc5"
                     /gene_synonym="4021401A16Rik; TRS31"
                     /note="hexamer: ATTAAA"
     polyA_site      2034
                     /gene="Trappc5"
                     /gene_synonym="4021401A16Rik; TRS31"
                     /note="major polyA site"
ORIGIN      
        1 gccatcaagg agttccgctg acccgcccgc agcacagttc cggttgagac ctttccccgc
       61 ccgagaacct tctccggcgc gctcgggcct cgtctttttt tctgtgcgtc cggagcagcg
      121 ttcccgggac tgcatcatgg aggcgcgttt cacacgcggg aagtcggcgc tgctagagcg
      181 cgcactggtg cggccccgca ccgaggtgag cctgagcgcc tttgcccttc tcttctccga
      241 gctggtgcag cactgtcaga gccgcgtttt ctctgtggcc gagcttcaag cacgcttggc
      301 tgccctgggc cgacaggtgg gcgcccgagt cctagatgcc ctggtggccc gtgagaaggg
      361 tgcccggcgt gagactaagg tgctgggcgc attgctcttc gtcaagggtg cggtgtggaa
      421 ggcactgttc ggcaaggagg cggacaagct ggagcaggcc aatgatgacg cccgcacttt
      481 ctacatcatc gagagggagc cgctcattaa cacctacatc tccgtgccca aggagaacag
      541 cacactgaac tgtgccagct tcacagcggg catcgtggag gctgtgctca cgcacagcgg
      601 cttccctgcc aaggttacgg cgcactggca caaggggacc acactcatga tcaaatttga
      661 agaggctgtg attgcccgag atcgggccct ggagggacgc tgaccccaca ggagataaag
      721 gacgagcaga tcctgttccc aagcttgtgt tgtgtcttgt gtaggggcgt cagatctgcc
      781 cagatcctga tcctggtcct gagtcccaga ctaagggagt ctgaaggcaa gcttgtcagg
      841 catagatgga gagtaaggaa gtgggcaatg gccgacttgg cttctggctt tcagttaagg
      901 ttggaggctt ggatgtatcg gggagatagg gcacttacag aattattgtt ggaacctgca
      961 gtctggagag gtgagggcgg ggatatgagg ttaagaggga ccgggacctg gcagactgcc
     1021 agtgctatag cccagtttgt agagtgccgt gggtttgatt ccttatgcca cataaagtgg
     1081 gtacaaattg tcttatccca gcactaggaa ggtagagaga gaaagatggt aagttcaagg
     1141 ccatcctctg ctacttagca agtttgagac cagctctggc agcacagcct cttaagtgtc
     1201 aggcaggtgt actcttcctt tgaaactgtt ttcttcaagt ctccatttgt tctaaaaaac
     1261 aaaaaaccca aaagccaggt agtaaagggg agggtgtggc tatgtgccta aaataaatgt
     1321 agagtggtta ttcgcccttt agacatcggc tactcaaagt ggcttgtgga ctgtcagcat
     1381 cagtatcagc attatcacta ccagcagcaa caccaacgtc accatcctcg tcccacatgc
     1441 aggatcactg gtccacccct atacctcctg gaccagaagt gtgtattcca gcccctttct
     1501 cagaggtctc cctgggactc ttatttcagg gcatcagagt cacccgaggg accaagaaac
     1561 tcagctggtt tcagaacaga acagaactgt aagtttcacc cctacagtca gattctgtag
     1621 gtttggggtg tgcataagaa tttgtttttg gtacattctg gagagctgct gggtgcccca
     1681 gggatcacac cgagaccagt ggcacaccag cctctcaaag ggggaagagc ccagaaccat
     1741 ctggaaactt gagggtttta aggttaatat ttacaaagtt tgttctgaga cagggttccg
     1801 gccgcccagg ctggcttcag ccttgctgta tatttaaggg tgactgtgaa tcccaaccct
     1861 tctgactctg catgaggttg agtgtttaac ttagtggctt atcacattta ctattttacg
     1921 cagagtctga attatgtttt cctggctgac ctggagcgca ctatgtagac caggctggcc
     1981 ctatactcaa gaggtctacc tccctagtgc tgagattaaa cttgagcacc accaaaaaaa
     2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//
