LOCUS       NM_153161               2557 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus trafficking protein particle complex 14 (Trappc14),
            mRNA.
ACCESSION   NM_153161 NM_001115015
VERSION     NM_153161.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Munton,R.P., Tweedie-Cullen,R., Livingstone-Zatchej,M.,
            Weinandy,F., Waidelich,M., Longo,D., Gehrig,P., Potthast,F.,
            Rutishauser,D., Gerrits,B., Panse,C., Schlapbach,R. and Mansuy,I.M.
  TITLE     Qualitative and quantitative analyses of protein phosphorylation in
            naive and stimulated mouse synaptosomal preparations
  JOURNAL   Mol Cell Proteomics 6 (2), 283-293 (2007)
   PUBMED   17114649
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC159257.2, AK138960.1 and AW824316.1.
            
            On or before Nov 10, 2009 this sequence version replaced
            NM_001115015.1, NM_153161.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK138960.1, ERR3363660.2424432.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164138
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-287               AC159257.2         170352-170638       c
            288-2291            AK138960.1         232-2235
            2292-2557           AW824316.1         1-266               c
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 77.0 cM"
     gene            1..2557
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /note="trafficking protein particle complex 14"
                     /db_xref="GeneID:231807"
                     /db_xref="MGI:MGI:2385896"
     exon            1..631
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     CDS             221..1963
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /note="uncharacterized protein C7orf43 homolog;
                     microtubule associated protein 11; MAP11 short transcript"
                     /codon_start=1
                     /product="trafficking protein particle complex subunit 14"
                     /protein_id="NP_694801.2"
                     /db_xref="CCDS:CCDS39343.2"
                     /db_xref="GeneID:231807"
                     /db_xref="MGI:MGI:2385896"
                     /translation="MESQCDYSMYFPAVPLPPRAELAGDPGRYRALPRRNHLYLGETV
                     RFLLVLRCRGSVGAGVGGGAGLASRGAWTELATSLAALASVSAGGALPGCGSAGDQDA
                     DPPGGGDPGGGGLFRGCSPLLTHGQGPATSGGATTLPVEEPIVSTDEVIFPLTVSLDR
                     LPPGTPKAKIVVTVWKREVEAPEVRDQGYLRLLQTRSPGETFRGEQSAFKAQVSTLLT
                     LLPPPVLKCRQFTVAGKHLTVLKVLNSSSQEEISIWDIRILPNFNASYLPVMPDGSVL
                     LVDNVCHQSGEVSMGSFCRLPGTSGYFPCPLSALEEHNFLFQLRGGEQPPPGAKEGLE
                     VPLIAVVQWSTPKLPFTQSIYTHYRLPSVRLDRPCFVMTASCESPVRTYERFTVTYTL
                     LNNLQDFLAVRLVWTPEHAQAGKQLCEEERRAMQAALDSIVCHTPLNNLGFSRKGSAL
                     TFSVAFQALRTGLFELSQHMKLKLQFTASVSHPPPEARPLSRKSSPSSPAVRDLVERH
                     QASLGRSQSFSHQQPSRSHLMRSGSVMERRAITPPVASPVGRPLYLPPDKAVLSLDKI
                     AKRECKVLVVEPVK"
     exon            632..727
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            728..857
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            858..944
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            945..1065
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            1066..1213
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            1214..1296
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            1297..1460
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            1461..1615
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            1616..1809
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     exon            1810..2546
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2524..2529
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /note="hexamer: ATTAAA"
     polyA_site      2545
                     /gene="Trappc14"
                     /gene_synonym="Map11"
                     /note="major polyA site"
ORIGIN      
        1 ttccgctttc tctccagtca ttcagcgccc gcactcctgg tctggcgctg ctgggtctag
       61 gttccgggtt cgtttctctg gtttccgggc caggctggtg tgtcccgctg cctgccgggc
      121 ggagccgcgg tcctccggtg tctggactcg caggccgagc tcccccggtc ccgtggctcc
      181 ctgccggccc ggtctcgggt cgcatcgtcc tccccaccca atggagtccc aatgcgacta
      241 ctcgatgtac tttccggctg tgccgctacc gccacgcgcc gagctggccg gggacccggg
      301 ccggtaccgg gcgctgcccc ggcgcaacca tctgtacctg ggggagacag tccgctttct
      361 gctggtgctg cgctgccgag gcagcgtggg ggctggcgtt gggggcggcg cgggcttggc
      421 atcccgaggg gcctggaccg agctggcgac ctccctggcc gccctggcct cggtcagcgc
      481 aggaggagcg ctgccagggt gcggcagcgc cggcgaccag gatgctgacc ccccgggggg
      541 aggggacccg gggggcgggg gtttgtttcg aggttgcagc ccccttctca cccacggcca
      601 gggccctgct acctcagggg gcgcgaccac gctgcctgtg gaagaaccga ttgtgtccac
      661 agatgaagtc atcttcccac tcaccgtttc actggataga ctgcccccag ggacacccaa
      721 ggccaagatt gtagtgaccg tgtggaagcg ggaggtcgag gcaccagaag tcagagatca
      781 aggctacctg cgcttgctac agactcgatc tcctggggag actttccgtg gagaacagag
      841 cgccttcaag gcccaagtga gcaccctatt gacgctgctg ccccctccag ttctgaaatg
      901 ccggcagttc actgtggctg gaaagcactt gaccgtgctc aaggtgctga atagctcttc
      961 ccaggaagag atctccatct gggatatccg aatcctcccc aacttcaatg ccagttatct
     1021 acctgtcatg cctgatggct ctgtgctgct ggtggacaat gtctgtcacc agtctgggga
     1081 agtctccatg ggatccttct gtcggcttcc tggaacatct ggctacttcc cctgtccact
     1141 tagtgccctg gaggaacaca acttcctgtt ccagctgaga gggggtgagc agccccctcc
     1201 tggggccaag gagggccttg aagtcccctt gattgccgtg gttcagtggt ccacgccgaa
     1261 gctgcccttc acccagagca tttacaccca ctaccgcctg cccagtgtcc gcctagaccg
     1321 cccctgcttt gtgatgactg cttcttgtga gtcccctgtt cggacctacg agcgtttcac
     1381 tgtcacctac acgctgctca acaacctcca agacttcctt gctgtgaggc ttgtgtggac
     1441 cccggaacat gcacaggctg gaaagcagct gtgtgaggag gagcgccggg ccatgcaggc
     1501 agccctagac tccatcgtct gtcacacacc cctcaataat cttggcttct cccggaaggg
     1561 cagcgcgctt accttcagtg tggccttcca ggccctgagg acggggctct ttgagctgag
     1621 ccagcacatg aaactgaagc tgcagttcac tgccagcgtg tcccaccctc cgcctgaagc
     1681 ccggcccctg tcccgaaaga gcagccccag cagtcctgct gtccgagacc tggtggagag
     1741 acaccaggcc agcctgggcc gttctcaatc tttctcccac cagcagcctt cccgtagcca
     1801 cctcatgagg tcaggcagtg tgatggaacg cagggccatc acaccccctg tggcctctcc
     1861 cgtcggccgt cccctctacc tgccccccga caaggctgtg ctttctcttg ataagattgc
     1921 caagcgtgag tgtaaagtcc tggtggtgga gcccgtcaag tagcaccgtt tgctagctca
     1981 accccggaca ggacacgcca gaaaccctaa gccccagagg gtcccttgtt cctaggctgt
     2041 acctcccact gtgggcagag aggccttgca gggctgcctg tctgtgtctg ctggtgaggg
     2101 atgagggcag aagctgtgaa atcacagtgt ggctgcagct cagacaacag tattccataa
     2161 gttcgggggg gggggggtgc gcgaggggag ggctggcccc accccagcag ggcaagggct
     2221 gcgggagctc ccttgtcctg tccttcgtcc agtttacaga gtatcctctc tcactcgtgt
     2281 tcaagcctcc ctgccactgc cgctgctgtt cctttgcact cacccgcagg gctgagatta
     2341 gagggtggta gtggtaaagg gacccaggac aatgactctc ctgtctcagg ggttggatgg
     2401 cctctttctg cccctcatgt ttacgttggc agcctgaagc actttaagtt ctgtttttgt
     2461 tttctgtttt tgtctgttcc tgtaacttat tctctgacta catcttccag ctgaagtaaa
     2521 actattaaaa gctgtttggg agggagaaaa aaaaaaa
//
