LOCUS       NM_146140               2224 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus translocation associated membrane protein 1-like 1
            (Tram1l1), mRNA.
ACCESSION   NM_146140
VERSION     NM_146140.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC114625.11.
            
            On Aug 14, 2018 this sequence version replaced NM_146140.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK044115.1, AK048118.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2224              AC114625.11        53982-56205         c
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 54.68 cM"
     gene            1..2224
                     /gene="Tram1l1"
                     /gene_synonym="A830091N21Rik"
                     /note="translocation associated membrane protein 1-like 1"
                     /db_xref="GeneID:229801"
                     /db_xref="MGI:MGI:2443503"
     exon            1..2224
                     /gene="Tram1l1"
                     /gene_synonym="A830091N21Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             157..1248
                     /gene="Tram1l1"
                     /gene_synonym="A830091N21Rik"
                     /codon_start=1
                     /product="translocating chain-associated membrane protein
                     1-like 1"
                     /protein_id="NP_666252.1"
                     /db_xref="CCDS:CCDS17819.1"
                     /db_xref="GeneID:229801"
                     /db_xref="MGI:MGI:2443503"
                     /translation="MGLRKKNARNPPVLSHEFMVQNHADMVSCVGMFFVLGLMFEGTS
                     EMSIAFLTLQHGVVVPAEGLPSGSRTLYHYGVKDLATVFFYMLVAIIIHATIQEYVLD
                     KLSRRLQLTKGKQNKLNEAGQLSVFYIVSGIWGMIILASENCLSDPTLLWKSQPHNMM
                     TFQMKFFYISQLAYWFHSFPELYFQKVRKQDIPGQLIYIGLHLFHIGGAYLLYLNHLG
                     LLLLMLHYAVELLSSVCSLLYFGDERYQKGLSLWPIVFISGRLVTLIVSVVTVGLHLA
                     GTNRNGNALSGNVNVLAAKIAVLSSSCSIQVYITWTLTTVWLQRWLEDANLHVCGRKR
                     RSRARKGTENGVENPNRIDSPPKKKEKAP"
     regulatory      1795..1800
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tram1l1"
                     /gene_synonym="A830091N21Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1815
                     /gene="Tram1l1"
                     /gene_synonym="A830091N21Rik"
                     /note="major polyA site"
     regulatory      1865..1870
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tram1l1"
                     /gene_synonym="A830091N21Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1887
                     /gene="Tram1l1"
                     /gene_synonym="A830091N21Rik"
ORIGIN      
        1 gtgcgcatgc tcggcctacg cggccccagc ctttgattga tcggtcggca gcggctgcga
       61 ccctgggcgt cagacgggcg gtgatgggga gcccggcgct gggagcggct cagtgatcag
      121 cggtggaggc cggtgactac tggtgagtac cgcggcatgg ggctccgcaa gaagaacgcc
      181 aggaaccccc cggtgttgag ccacgaattc atggtgcaga accacgcgga tatggtctcc
      241 tgcgtgggca tgttcttcgt gctggggctt atgttcgagg gcacctccga gatgtcgatc
      301 gcgttcctca ctctgcagca tggagtcgtt gtcccagcgg aagggctgcc ctccgggtcc
      361 aggaccctgt accattatgg ggtcaaagat ctggccacag tgttcttcta catgctggtg
      421 gccatcatca tccacgccac cattcaggag tacgtgctag ataagctcag caggagactg
      481 cagctcacca aaggcaaaca aaacaaactg aatgaggccg ggcagctgag tgtgttctat
      541 atagtgtccg ggatctgggg catgatcatt ctggcctctg agaactgcct gtcagaccct
      601 acactcttgt ggaagtctca gccccacaac atgatgacat ttcagatgaa atttttctac
      661 atttcacagt tggcttactg gtttcatagc tttccggagc tttacttcca gaaagtcagg
      721 aagcaagata tcccgggtca gctcatctac attggcctcc acctcttcca cattggaggg
      781 gcctatctct tgtacttgaa ccacttgggc ctgctgctgc tgatgctgca ctacgccgta
      841 gagctcctct ccagcgtgtg cagcctgctt tactttggtg atgagcggta ccagaaaggg
      901 ttgtctctgt ggcctatcgt gtttatatcc gggagactcg tgacattgat tgtctcggtg
      961 gttacagtag ggcttcacct ggccgggaca aatcggaatg gcaatgcact ctctggtaat
     1021 gtcaatgtgc tggcagctaa aatcgctgtt ctgtcctcga gttgcagtat ccaggtgtac
     1081 ataacatgga ccttgactac tgtctggctt cagagatggt tagaagacgc gaaccttcat
     1141 gtttgtggaa ggaagagacg gtccagggcg agaaaaggca cagaaaatgg agtggagaat
     1201 ccgaatagaa tagactctcc accaaagaag aaagagaagg ctccttaagc agcttcaagc
     1261 taattgattc ttacctccaa gggaatccac tccttgctat gtggtgtctc tgtgctagag
     1321 agtttctgtt tttcagaacg ggtcgtgctt ttttaaatat tgctattgtt attgtctaat
     1381 gtgtttttaa gggttggcag cggtatgagt ggtggtggga attaagatta aaccactcag
     1441 cctctaaatc ctgtcagaat agttaacaga ccaacatcgt atttagttta gattgttacc
     1501 tcaacgattg tccaaacgtt tcgtggtgat gactgcagaa ttgtgtgtat aaataatagt
     1561 ttcctgcttc cagtgttctt tatcgcatta acaagtctgg cagcaaagtg gttttctcca
     1621 tgttctcttg caggataaag tggaaaatct gataaaggtg gaacttaaat cagtattatg
     1681 taatcgttgg gattcctttt taaagttgtt ttaaatttac aatggaaagt atttgtcaaa
     1741 cccccaaagt atgtgtttaa ttttgtaatt agtgactgct agtgctatgc ccccattaaa
     1801 gcatcaaact ccgaatagat gacatgtgtg gtgatattga catttatcga atcaaaatac
     1861 ctttaataaa tatcatgggt tactgaagag gtgaacaact tcttcctgtt tattttaaac
     1921 acttgtccag gaaaactcac aaaattcaac cttactgaaa aaaaatcgta tctactcaat
     1981 atttactaag aatggttttg gcagattcat aaaatttggt gaaagcagtg tatcagaaga
     2041 atattattta atatataaac aattttaaag ataaggctat ggttaaacgt gtctatacat
     2101 atacactgtt taaataatat ataaatatat atttgtgtat gtgtgtgtat gtgtgcatgt
     2161 gtgtgtatgt gtgtacagct aattatatct gggaaatatt tgacatatta aactccattt
     2221 aaag
//
