LOCUS       XM_006501835            1358 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus tropomyosin 3, gamma (Tpm3), transcript
            variant X1, mRNA.
ACCESSION   XM_006501835
VERSION     XM_006501835.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 22, 2016 this sequence version replaced XM_006501835.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..1358
                     /gene="Tpm3"
                     /gene_synonym="gamma-TM; hTM30nm; hTMnm; TM30nm; Tm5NM;
                     TMnm; Tpm-5; Tpm5; Trop-5"
                     /note="tropomyosin 3, gamma; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 262 ESTs, 1546 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 31 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:59069"
                     /db_xref="MGI:MGI:1890149"
     CDS             207..971
                     /gene="Tpm3"
                     /gene_synonym="gamma-TM; hTM30nm; hTMnm; TM30nm; Tm5NM;
                     TMnm; Tpm-5; Tpm5; Trop-5"
                     /codon_start=1
                     /product="tropomyosin alpha-3 chain isoform X1"
                     /protein_id="XP_006501898.1"
                     /db_xref="GeneID:59069"
                     /db_xref="MGI:MGI:1890149"
                     /translation="MAGTTTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQ
                     AEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDE
                     EKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQ
                     IRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTID
                     DLEDELYAQKLKYKAISDELDHALNDMTSIASLQPT"
ORIGIN      
        1 ccttcacttt ctgcgggctg cccgagtgga ctgcgttccc gcctgcttgg cagggggagg
       61 acgcgcggtg gcggcggcgt cacatcccgg cgtatgagtg agttccggta tttcagggcg
      121 gagcaggcgg aagtagggtg aaaagcggct acaacgccga gcggaggagg taggaacctg
      181 atttccagaa gcagcttgta ggcaccatgg ccgggaccac caccatcgag gcggtaaagc
      241 gcaagatcca ggttctgcag cagcaagctg atgatgcgga ggaaagggcc gagcgcctcc
      301 agcgggaagt ggagggagaa aggcgggccc gggagcaggc tgaagctgag gtggcctcct
      361 tgaaccgcag gatccagctg gttgaagagg agctggaccg tgcgcaggag cgccttgcca
      421 ctgctttgca gaagctggag gaagcagaga aggctgctga tgagagtgag agaggtatga
      481 aggtgattga aaatcgggct ctaaaagatg aagaaaagat ggaactccag gaaatccagc
      541 taaaggaagc aaagcacatt gcagaagagg ccgataggaa gtatgaagag gtggctcgta
      601 agttggtgat tattgaagga gacttggaac gcacggagga acgtgctgag ctggcagagt
      661 cccgttgccg agagatggat gaacagatca gactgatgga ccagaacctg aagtgtctga
      721 gtgctgctga agaaaagtac tctcaaaaag aagacaagta tgaagaagaa ataaagattc
      781 ttactgataa actcaaggag gcagagaccc gtgctgagtt tgctgaaaga tcggtagcca
      841 agctggagaa gaccattgat gacctggaag acgagctcta tgcccagaaa ctgaagtaca
      901 aggccattag cgacgagctg gaccacgccc tcaatgacat gacctctata gcgtctctac
      961 agccaacttg agcgaaaccg cctgctttct aatgagctga agctaacgct gcatggtctt
     1021 tgtgactgac gggcagggct ccctgatgcc cagtaaaccc acaccactga cctggaccca
     1081 gcaaaaagct gattgccttt taaaccgtta ctgttcgccc taagcaagtt gcttttttaa
     1141 tgagggcagc tagactaccg ttgatttcct ggcagccccc accaagttgc agtggctatt
     1201 tctattctag aagagcttgt gggtgatgaa gaaggggcct gggagattta gtgcggaact
     1261 tggaagccct tagctgcagc cttctcacct gtacactgac tgtagggctt gctctcgtgc
     1321 atggatattt tctaacaata aaagcactga cttgacaa
//
