LOCUS       XM_006526156            3553 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus tubulin polyglutamylase complex subunit 2
            (Tpgs2), transcript variant X1, mRNA.
ACCESSION   XM_006526156
VERSION     XM_006526156.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000084.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006526156.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="18"
     gene            1..3553
                     /gene="Tpgs2"
                     /gene_synonym="5730437P09Rik; 5730494M16Rik; Pgs2"
                     /note="tubulin polyglutamylase complex subunit 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 mRNAs, 6 ESTs, 1657 long SRA reads, and 93% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 34 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:66648"
                     /db_xref="MGI:MGI:1913898"
     CDS             251..775
                     /gene="Tpgs2"
                     /gene_synonym="5730437P09Rik; 5730494M16Rik; Pgs2"
                     /codon_start=1
                     /product="tubulin polyglutamylase complex subunit 2
                     isoform X1"
                     /protein_id="XP_006526219.1"
                     /db_xref="GeneID:66648"
                     /db_xref="MGI:MGI:1913898"
                     /translation="MPSSGNEDHQLEKPHFDCRSAIFELDSCNGNGKVCLVYKNGKPG
                     LAHDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFSM
                     YKPITYNTSLLTEESDNFVNKLDPSKVFKSKNKILIPKKKGPVPPASGQKGPGPLPPP
                     TSKPTTGSGNPVRK"
ORIGIN      
        1 ttccattctt ctacatacag acatccagtt tgaccagcac catttattgg aaattctttc
       61 tggatttttg ttttgttttt tgtgtgtttg tttgtttgtt ttcttttgtt agttaaaaac
      121 aaaaccaaaa aacccacctt gggctggaga gatggctgag tggttaagag cattgactgc
      181 tcttccagag gtcctgagtt ctattcccag caaccacgtg gtggctcaca accatctata
      241 ataggatctg atgccctctt ctggaaatga agaccaccag ctagagaagc ctcactttga
      301 ctgtcgcagt gcaatatttg agctggattc atgcaatggg aatgggaaag tttgcctcgt
      361 ctacaaaaat gggaaacctg ggttagctca tgacactgag atatggttcc tggacagagc
      421 attatactgg cactttctca cggatacctt taccgcctat taccgcctgc tcatcaccca
      481 cctgggcctg ccccagtggc agtatgcctt taccagctat ggcattagcc cacaggccaa
      541 gcaatggttc agtatgtaca aacccatcac ctacaacaca agcctgctca cagaagagtc
      601 cgacaacttt gtgaacaagc tagaccccag caaagtgttc aagagcaaga acaagatttt
      661 aatcccaaaa aagaaagggc ctgtaccacc tgccagtggt cagaaagggc ctgggccctt
      721 acctcctcct acctctaagc ctaccacagg ctctggaaat cctgtccgaa aataagcatt
      781 ctatcacctc agtaatatcc agacacagat ggccctgtgg cagcggcatt ctcctgagag
      841 accaaagcct taggcctttg tttccactgt cattagctag gggctgggac gatcacactg
      901 aattctcctc aggagttcct tcctctgtag gttgtgacaa cctcatctcc aaagccaacg
      961 aagactttca gatgtacctg agctttctta tgtctgtacc caatccttaa cttcttagca
     1021 gtaattagag aggtcaccct cccaaataaa cccatggttt gactcatgaa gcatcagtat
     1081 cgactagtta tgtgaccatc tcagttaatg aaaattgcac accttcagtt gcattcacca
     1141 cacttcagct atgcacctga tggtagagtc catattggac agcacagaaa ggggaaggtt
     1201 tttgtcacag aagtgttttg gacaacattg catgtgaaca cgttcatact gtccttcaga
     1261 tacaataacg taatgcctta gtttcatacg ctttatgttt tgagaaaaca ttttcaaaga
     1321 cagtcttgtg ttctttacaa cctagaccag gaatgcttaa aggtgtgatc cctagactta
     1381 gaattgtgca ccaaagtcac tggtatcatg tggggataag atgattggat tccagttctg
     1441 atctgcaaaa taagaatttc caagaaaaat tccaggtgtc agggttttct ttttaagaca
     1501 aggtctcact atatagttta ggctgaccta tagctcacac accctatata gcttcctgac
     1561 acacacacac acaccctgtc actaacgttt taattacaga tgtacagtat catgcgtaac
     1621 attggatttt tagtcaattt aacagtactt ctgagtttga aactttcagc ttaagatctc
     1681 agtggtttca aaccacaaag tttctttgta attgggtaaa gcacgtataa cttttttgtt
     1741 tttttttttt tgtttttttt tttttgaaac agggtttttc tgtgtagtcc tggctgtcct
     1801 ggaactcatg gagttgtggc tgctaaatga cttagtgcat agagttagtt atcctgtcct
     1861 tcctttgtaa tgtgacccta cggttgctaa ttatgacctt cctgctagca gctgtgatct
     1921 cttaagtcgt tcattttttg cttgcaagac accagttggg ttctcacttg tgcctttata
     1981 cctgtccttt ccttgtgagg ttcagctcta gtctgcctct actcaaagct cagtgaagct
     2041 ccaactcccc taggtgagca gtgatttttt tgtgcttctc cagaaagcca tcctaatcaa
     2101 ttctgcatta acccaaataa atgtgtcata ttttagggca ataaattaga atgaatgagt
     2161 aaagttgtga aaatgtttaa ctttaaaaat tgagaagaca ataattgcct tattttagag
     2221 tctggatatc tttcactcat cttacggtct gtgtcacaaa accatcaaaa tgaaataggt
     2281 tacacatgaa gccatgaatg ccactggtct tttctgcacc cagaaactat gttgtaccca
     2341 gatactacct aactggatat cccaccaata actgtcttga taaggctcta aaagaccaaa
     2401 aagtaactcg tgagacatgg tgggatgtga aacttcttac cctgtatcta ggaaaagttc
     2461 ttcaacacca ttgatgctgt ttcttcagat gtaaaatgaa aatttatgga agggctataa
     2521 aactattaaa taatgcaaat ggagtacaca tggagatgct ttcagtaagc aacagctttt
     2581 aaaatagcat tcagaaagtc cattttctcc ccatgaatta cctaaccaac agaaccaatt
     2641 gctttaccag atgatttttt gacaaaattg attattttaa cacctatctt tactgtctat
     2701 ttcaaagcca ttagctttct tataaaatcg caaagacatt tcattcctga agcaatttgg
     2761 tacttttgtg gtgtagttac ctctctgata aaatgatttc taatcaaaac tagaaatagc
     2821 taaagaatgg gggataactg aaatttaatt ggatgacagc ctcccacagc ttctgttaga
     2881 cctcctgagg agaaggatca aggctctcat tttcccaact gaccacccag ccctgtcaca
     2941 gagctaccta caaacctggc ccttagtgca tagtttgttc tactgtgttt tcaggacctg
     3001 atggcttaat acacataagt ttacccgtgt gtatttctgc aggccagaag ttcaatgtca
     3061 gttttataga gccaaaatct agttgtcact gggccaggac ttgggaggct cctatagagt
     3121 ctgtccctgc ttcctcctgc agattgttgt ttgggttcat atcacttcag tcctgttgct
     3181 ttcacttcgt cttctctttc tccaaatctc ttctgactgt cctttataag gacacttatg
     3241 attggatttg aggcatgtcg gacactacag gatgatcttc tcacacctgc aaggaatcct
     3301 tacaaaggaa ttgtacattt cagagattag aaccggaggc cccagagatg ttgagtcaat
     3361 gtattacagt agtgtttgct acttcaccat ttcaagggac tgtggatata aatgattgtt
     3421 ttgaaggcca taacggatct ataagccact ttagagctgg gaaactaagc tgccgtttgt
     3481 acccctgctc atcttctcta cattgtgttc aacaatgaac cttgaagaaa ataaaaccca
     3541 ggtctccagc ctt
//
