LOCUS       NM_001359364            1326 bp    mRNA    linear   ROD 08-FEB-2024
DEFINITION  Mus musculus tumor protein D52-like 1 (Tpd52l1), transcript variant
            1, mRNA.
ACCESSION   NM_001359364 XM_006512703
VERSION     NM_001359364.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Lewandowski,J.P., Du,F., Zhang,S., Powell,M.B., Falkenstein,K.N.,
            Ji,H. and Vokes,S.A.
  TITLE     Spatiotemporal regulation of GLI target genes in the mammalian limb
            bud
  JOURNAL   Dev Biol 406 (1), 92-103 (2015)
   PUBMED   26238476
REFERENCE   2  (bases 1 to 1326)
  AUTHORS   Thompson,C.L., Ng,L., Menon,V., Martinez,S., Lee,C.K.,
            Glattfelder,K., Sunkin,S.M., Henry,A., Lau,C., Dang,C.,
            Garcia-Lopez,R., Martinez-Ferre,A., Pombero,A., Rubenstein,J.L.R.,
            Wakeman,W.B., Hohmann,J., Dee,N., Sodt,A.J., Young,R., Smith,K.,
            Nguyen,T.N., Kidney,J., Kuan,L., Jeromin,A., Kaykas,A., Miller,J.,
            Page,D., Orta,G., Bernard,A., Riley,Z., Smith,S., Wohnoutka,P.,
            Hawrylycz,M.J., Puelles,L. and Jones,A.R.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   3  (bases 1 to 1326)
  AUTHORS   Hoerder-Suabedissen,A., Oeschger,F.M., Krishnan,M.L., Belgard,T.G.,
            Wang,W.Z., Lee,S., Webber,C., Petretto,E., Edwards,A.D. and
            Molnar,Z.
  TITLE     Expression profiling of mouse subplate reveals a dynamic gene
            network and disease association with autism and schizophrenia
  JOURNAL   Proc Natl Acad Sci U S A 110 (9), 3555-3560 (2013)
   PUBMED   23401504
REFERENCE   4  (bases 1 to 1326)
  AUTHORS   Munger,S.C., Aylor,D.L., Syed,H.A., Magwene,P.M., Threadgill,D.W.
            and Capel,B.
  TITLE     Elucidation of the transcription network governing mammalian sex
            determination by exploiting strain-specific susceptibility to sex
            reversal
  JOURNAL   Genes Dev 23 (21), 2521-2536 (2009)
   PUBMED   19884258
REFERENCE   5  (bases 1 to 1326)
  AUTHORS   Proux-Gillardeaux,V., Galli,T., Callebaut,I., Mikhailik,A.,
            Calothy,G. and Marx,M.
  TITLE     D53 is a novel endosomal SNARE-binding protein that enhances
            interaction of syntaxin 1 with the synaptobrevin 2 complex in vitro
  JOURNAL   Biochem J 370 (Pt 1), 213-221 (2003)
   PUBMED   12376003
REFERENCE   6  (bases 1 to 1326)
  AUTHORS   Byrne,J.A., Nourse,C.R., Basset,P. and Gunning,P.
  TITLE     Identification of homo- and heteromeric interactions between
            members of the breast carcinoma-associated D52 protein family using
            the yeast two-hybrid system
  JOURNAL   Oncogene 16 (7), 873-881 (1998)
   PUBMED   9484778
REFERENCE   7  (bases 1 to 1326)
  AUTHORS   Byrne,J.A., Mattei,M.G., Basset,P. and Gunning,P.
  TITLE     Identification and in situ hybridization mapping of a mouse Tpd52l1
            (D53) orthologue to chromosome 10A4-B2
  JOURNAL   Cytogenet Cell Genet 81 (3-4), 199-201 (1998)
   PUBMED   9730602
REFERENCE   8  (bases 1 to 1326)
  AUTHORS   Byrne,J.A., Mattei,M.G. and Basset,P.
  TITLE     Definition of the tumor protein D52 (TPD52) gene family through
            cloning of D52 homologues in human (hD53) and mouse (mD52)
  JOURNAL   Genomics 35 (3), 523-532 (1996)
   PUBMED   8812487
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CX238524.1, BC141068.1, AI843750.1 and AV016496.1.
            
            [WARNING] On Mar 31, 2024 this sequence was replaced by
            NM_001359364.2.
            
            On Jan 3, 2018 this sequence version replaced XM_006512703.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC141068.1, BU559215.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               CX238524.1         1-150
            151-1072            BC141068.1         1-922
            1073-1324           AI843750.1         17-268              c
            1325-1326           AV016496.1         191-192
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 17.36 cM"
     gene            1..1326
                     /gene="Tpd52l1"
                     /gene_synonym="D53"
                     /note="tumor protein D52-like 1"
                     /db_xref="GeneID:21987"
                     /db_xref="MGI:MGI:1298386"
     CDS             229..858
                     /gene="Tpd52l1"
                     /gene_synonym="D53"
                     /note="isoform 1 is encoded by transcript variant 1; tumor
                     protein D53"
                     /codon_start=1
                     /product="tumor protein D53 isoform 1"
                     /protein_id="NP_001346293.1"
                     /db_xref="CCDS:CCDS87983.1"
                     /db_xref="GeneID:21987"
                     /db_xref="MGI:MGI:1298386"
                     /translation="MEAQAQGLLETEPLQGRDGDAVGSADFSSMLSEEEKEELKAELI
                     QLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSRSWHDMQTTTAYKKTHET
                     LSHAGQKATAAFNNVGTAISKKFGDMRSHSFGYSIRHSISMPAMRNSSTFKSFEERVE
                     TTVASLKTKVGGTNHGGGSFEEVLNSTAHASSQNASAGSRQTKDEELQC"
ORIGIN      
        1 gttgcgctgt gtagcctagg tggattggaa ggggcggagg taaccagcag cggccagtgg
       61 tggccgccgc cagtaccccg ccccctccac gaatgctcgc gacacgcgcg ccgggagagg
      121 gcacgggcgg cggggctagc tgtcttccga gctcgggaat cgctaccatc tgctgctctg
      181 cgaggagtcc gcgtgttctc cgcggtgctc agctccaaac cggccaccat ggaggcgcag
      241 gcacaaggct tgttggagac ggaaccgcta caaggaagag atggggatgc agtaggcagt
      301 gctgacttct ctagcatgct ctctgaggag gagaaggaag agctaaaggc agagttaatt
      361 cagctagaag acgaaatcac aacattacga caagttttgt cagcaaaaga aagacatctg
      421 gttgagatca aacagaaact cggcatgaat ctgatgaatg agttaaagca gaacttcagc
      481 aggagctggc acgacatgca gaccacgact gcgtacaaga aaacgcacga aaccctgagc
      541 cacgcagggc agaaggcaac agcagctttc aataacgtgg gaactgccat cagcaagaag
      601 tttggagata tgaggtctca ctcttttggg tactccatcc gccattccat aagtatgcct
      661 gccatgagga attcttctac tttcaaatca tttgaggaga gggttgagac aactgttgca
      721 agcctcaaga cgaaagtagg tgggacaaac cacggtggtg gcagttttga ggaggtcctg
      781 aactccacag cacacgccag ctcacagaat gcttcagcag gctcccggca gaccaaggac
      841 gaggagctgc agtgctaggt cccgcctggg ctgctgctgg tcaatctgcc tgctcatcct
      901 ctgatatgaa gaccaaaatc ccactgggaa ccccaagttt tgacattgat atttaaatgg
      961 ggtctccaaa aagcttaata aaatgatttc tttttgcatt tgtgttgatg accactactc
     1021 tggagtattt acaaatgtca tctttaaaaa tagacaacct ggagcagggt cataattgtt
     1081 ctgaattctt gtctgcggaa ctcaatgtat ttcccaatca tgcagatact gattattagc
     1141 tttggttttg acttggtctc caaaccaata tgcatgtctc agagtgcacc tgccagtctg
     1201 tagatcgaca ggtgacacta tttatgacgg tctccagcag ggcgcaaatc ctacaaactt
     1261 caccaaattg cttgtgattt ttatgtgcat ttatttaagt cattaaaata attcatttta
     1321 acgatg
//
