LOCUS       NM_001195529            3037 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus trophoblast glycoprotein-like (Tpbgl), mRNA.
ACCESSION   NM_001195529 XM_486328 XM_905189
VERSION     NM_001195529.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3037)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3037)
  AUTHORS   Katayama,S., Tomaru,Y., Kasukawa,T., Waki,K., Nakanishi,M.,
            Nakamura,M., Nishida,H., Yap,C.C., Suzuki,M., Kawai,J., Suzuki,H.,
            Carninci,P., Hayashizaki,Y., Wells,C., Frith,M., Ravasi,T.,
            Pang,K.C., Hallinan,J., Mattick,J., Hume,D.A., Lipovich,L.,
            Batalov,S., Engstrom,P.G., Mizuno,Y., Faghihi,M.A., Sandelin,A.,
            Chalk,A.M., Mottagui-Tabar,S., Liang,Z., Lenhard,B. and
            Wahlestedt,C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   3  (bases 1 to 3037)
  AUTHORS   Carninci,P., Kasukawa,T., Katayama,S., Gough,J., Frith,M.C.,
            Maeda,N., Oyama,R., Ravasi,T., Lenhard,B., Wells,C., Kodzius,R.,
            Shimokawa,K., Bajic,V.B., Brenner,S.E., Batalov,S., Forrest,A.R.,
            Zavolan,M., Davis,M.J., Wilming,L.G., Aidinis,V., Allen,J.E.,
            Ambesi-Impiombato,A., Apweiler,R., Aturaliya,R.N., Bailey,T.L.,
            Bansal,M., Baxter,L., Beisel,K.W., Bersano,T., Bono,H., Chalk,A.M.,
            Chiu,K.P., Choudhary,V., Christoffels,A., Clutterbuck,D.R.,
            Crowe,M.L., Dalla,E., Dalrymple,B.P., de Bono,B., Della Gatta,G.,
            di Bernardo,D., Down,T., Engstrom,P., Fagiolini,M., Faulkner,G.,
            Fletcher,C.F., Fukushima,T., Furuno,M., Futaki,S., Gariboldi,M.,
            Georgii-Hemming,P., Gingeras,T.R., Gojobori,T., Green,R.E.,
            Gustincich,S., Harbers,M., Hayashi,Y., Hensch,T.K., Hirokawa,N.,
            Hill,D., Huminiecki,L., Iacono,M., Ikeo,K., Iwama,A., Ishikawa,T.,
            Jakt,M., Kanapin,A., Katoh,M., Kawasawa,Y., Kelso,J., Kitamura,H.,
            Kitano,H., Kollias,G., Krishnan,S.P., Kruger,A., Kummerfeld,S.K.,
            Kurochkin,I.V., Lareau,L.F., Lazarevic,D., Lipovich,L., Liu,J.,
            Liuni,S., McWilliam,S., Madan Babu,M., Madera,M., Marchionni,L.,
            Matsuda,H., Matsuzawa,S., Miki,H., Mignone,F., Miyake,S.,
            Morris,K., Mottagui-Tabar,S., Mulder,N., Nakano,N., Nakauchi,H.,
            Ng,P., Nilsson,R., Nishiguchi,S., Nishikawa,S., Nori,F., Ohara,O.,
            Okazaki,Y., Orlando,V., Pang,K.C., Pavan,W.J., Pavesi,G.,
            Pesole,G., Petrovsky,N., Piazza,S., Reed,J., Reid,J.F., Ring,B.Z.,
            Ringwald,M., Rost,B., Ruan,Y., Salzberg,S.L., Sandelin,A.,
            Schneider,C., Schonbach,C., Sekiguchi,K., Semple,C.A., Seno,S.,
            Sessa,L., Sheng,Y., Shibata,Y., Shimada,H., Shimada,K., Silva,D.,
            Sinclair,B., Sperling,S., Stupka,E., Sugiura,K., Sultana,R.,
            Takenaka,Y., Taki,K., Tammoja,K., Tan,S.L., Tang,S., Taylor,M.S.,
            Tegner,J., Teichmann,S.A., Ueda,H.R., van Nimwegen,E., Verardo,R.,
            Wei,C.L., Yagi,K., Yamanishi,H., Zabarovsky,E., Zhu,S., Zimmer,A.,
            Hide,W., Bult,C., Grimmond,S.M., Teasdale,R.D., Liu,E.T.,
            Brusic,V., Quackenbush,J., Wahlestedt,C., Mattick,J.S., Hume,D.A.,
            Kai,C., Sasaki,D., Tomaru,Y., Fukuda,S., Kanamori-Katayama,M.,
            Suzuki,M., Aoki,J., Arakawa,T., Iida,J., Imamura,K., Itoh,M.,
            Kato,T., Kawaji,H., Kawagashira,N., Kawashima,T., Kojima,M.,
            Kondo,S., Konno,H., Nakano,K., Ninomiya,N., Nishio,T., Okada,M.,
            Plessy,C., Shibata,K., Shiraki,T., Suzuki,S., Tagami,M., Waki,K.,
            Watahiki,A., Okamura-Oho,Y., Suzuki,H., Kawai,J. and Hayashizaki,Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   4  (bases 1 to 3037)
  AUTHORS   Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S.,
            Nikaido,I., Osato,N., Saito,R., Suzuki,H., Yamanaka,I.,
            Kiyosawa,H., Yagi,K., Tomaru,Y., Hasegawa,Y., Nogami,A.,
            Schonbach,C., Gojobori,T., Baldarelli,R., Hill,D.P., Bult,C.,
            Hume,D.A., Quackenbush,J., Schriml,L.M., Kanapin,A., Matsuda,H.,
            Batalov,S., Beisel,K.W., Blake,J.A., Bradt,D., Brusic,V.,
            Chothia,C., Corbani,L.E., Cousins,S., Dalla,E., Dragani,T.A.,
            Fletcher,C.F., Forrest,A., Frazer,K.S., Gaasterland,T.,
            Gariboldi,M., Gissi,C., Godzik,A., Gough,J., Grimmond,S.,
            Gustincich,S., Hirokawa,N., Jackson,I.J., Jarvis,E.D., Kanai,A.,
            Kawaji,H., Kawasawa,Y., Kedzierski,R.M., King,B.L., Konagaya,A.,
            Kurochkin,I.V., Lee,Y., Lenhard,B., Lyons,P.A., Maglott,D.R.,
            Maltais,L., Marchionni,L., McKenzie,L., Miki,H., Nagashima,T.,
            Numata,K., Okido,T., Pavan,W.J., Pertea,G., Pesole,G.,
            Petrovsky,N., Pillai,R., Pontius,J.U., Qi,D., Ramachandran,S.,
            Ravasi,T., Reed,J.C., Reed,D.J., Reid,J., Ring,B.Z., Ringwald,M.,
            Sandelin,A., Schneider,C., Semple,C.A., Setou,M., Shimada,K.,
            Sultana,R., Takenaka,Y., Taylor,M.S., Teasdale,R.D., Tomita,M.,
            Verardo,R., Wagner,L., Wahlestedt,C., Wang,Y., Watanabe,Y.,
            Wells,C., Wilming,L.G., Wynshaw-Boris,A., Yanagisawa,M., Yang,I.,
            Yang,L., Yuan,Z., Zavolan,M., Zhu,Y., Zimmer,A., Carninci,P.,
            Hayatsu,N., Hirozane-Kishikawa,T., Konno,H., Nakamura,M.,
            Sakazume,N., Sato,K., Shiraki,T., Waki,K., Kawai,J., Aizawa,K.,
            Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Miyazaki,A., Sakai,K., Sasaki,D., Shibata,K.,
            Shinagawa,A., Yasunishi,A., Yoshino,M., Waterston,R., Lander,E.S.,
            Rogers,J., Birney,E. and Hayashizaki,Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   5  (bases 1 to 3037)
  AUTHORS   Kawai,J., Shinagawa,A., Shibata,K., Yoshino,M., Itoh,M., Ishii,Y.,
            Arakawa,T., Hara,A., Fukunishi,Y., Konno,H., Adachi,J., Fukuda,S.,
            Aizawa,K., Izawa,M., Nishi,K., Kiyosawa,H., Kondo,S., Yamanaka,I.,
            Saito,T., Okazaki,Y., Gojobori,T., Bono,H., Kasukawa,T., Saito,R.,
            Kadota,K., Matsuda,H., Ashburner,M., Batalov,S., Casavant,T.,
            Fleischmann,W., Gaasterland,T., Gissi,C., King,B., Kochiwa,H.,
            Kuehl,P., Lewis,S., Matsuo,Y., Nikaido,I., Pesole,G.,
            Quackenbush,J., Schriml,L.M., Staubli,F., Suzuki,R., Tomita,M.,
            Wagner,L., Washio,T., Sakai,K., Okido,T., Furuno,M., Aono,H.,
            Baldarelli,R., Barsh,G., Blake,J., Boffelli,D., Bojunga,N.,
            Carninci,P., de Bonaldo,M.F., Brownstein,M.J., Bult,C.,
            Fletcher,C., Fujita,M., Gariboldi,M., Gustincich,S., Hill,D.,
            Hofmann,M., Hume,D.A., Kamiya,M., Lee,N.H., Lyons,P.,
            Marchionni,L., Mashima,J., Mazzarelli,J., Mombaerts,P., Nordone,P.,
            Ring,B., Ringwald,M., Rodriguez,I., Sakamoto,N., Sasaki,H.,
            Sato,K., Schonbach,C., Seya,T., Shibata,Y., Storch,K.F., Suzuki,H.,
            Toyo-oka,K., Wang,K.H., Weitz,C., Whittaker,C., Wilming,L.,
            Wynshaw-Boris,A., Yoshida,K., Hasegawa,Y., Kawaji,H., Kohtsuki,S.
            and Hayashizaki,Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   6  (bases 1 to 3037)
  AUTHORS   Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P.,
            Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M.,
            Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A.,
            Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K.,
            Fujiwake,S., Inoue,K. and Togawa,Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   7  (bases 1 to 3037)
  AUTHORS   Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
            Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   8  (bases 1 to 3037)
  AUTHORS   Carninci,P. and Hayashizaki,Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC111086.18 and AK032609.1.
            
            On or before Sep 15, 2010 this sequence version replaced
            XM_905189.3, XM_486328.4.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2806              AC111086.18        77188-79993         c
            2807-3037           AK032609.1         1881-2111
FEATURES             Location/Qualifiers
     source          1..3037
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.11 cM"
     gene            1..3037
                     /gene="Tpbgl"
                     /gene_synonym="EG245190; Gm4980"
                     /note="trophoblast glycoprotein-like"
                     /db_xref="GeneID:100503386"
                     /db_xref="MGI:MGI:3646425"
     exon            1..3037
                     /gene="Tpbgl"
                     /gene_synonym="EG245190; Gm4980"
                     /inference="alignment:Splign:2.1.0"
     CDS             456..1610
                     /gene="Tpbgl"
                     /gene_synonym="EG245190; Gm4980"
                     /codon_start=1
                     /product="trophoblast glycoprotein-like precursor"
                     /protein_id="NP_001182458.1"
                     /db_xref="CCDS:CCDS57566.1"
                     /db_xref="GeneID:100503386"
                     /db_xref="MGI:MGI:3646425"
                     /translation="MAPRAGQRGLWSPLPGLLLLAAALSRPAAPCPFQCYCFGSPRLM
                     LRCASGAELRQPPRDVPPDARNLTIVGANLTVLRAAAFAGGGEGATDGVRLPLLTALR
                     LTHNNIEVVEDGAFDGLPSLAALDLSHNPLRALGYRAFRGLPALRSLQLNHALARGSP
                     GMLDALDAALAPLAELRLLGLVGNALSRLPLAALRLPRLEQLDARVNALAGLGPDELS
                     ALERDGDLPQPRLLLADNPLSCGCTSRPLLAWLHNATERVPDARRLRCASPRVLLDRP
                     LIDLDEARLGCSDGDAHESGEGIDVAGPELEASYVFFGLVLALIGLIFLMVLYLNRRG
                     IQRWMHNLREACRDQMEGYHYRYEQDADPRRAPAPAAPAGSRATSPGSGL"
     regulatory      2999..3004
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tpbgl"
                     /gene_synonym="EG245190; Gm4980"
                     /note="hexamer: TATAAA"
     polyA_site      3022
                     /gene="Tpbgl"
                     /gene_synonym="EG245190; Gm4980"
                     /note="major polyA site"
ORIGIN      
        1 agctcgtgaa ctagagagca ggggagcaag agagcgcagc ggccctaagc ctgcatctcc
       61 ggagcctccc accccgcctc ccttgcgagg aggtgcggag actccgctgg gggcggagga
      121 ggcggccagg aggcggggag ggggaggcaa accctgccca ctcggctcgg agcccggaac
      181 agccgcggaa gtcggaggcc ggagcgcagg gcgacgaggg cagcgagggc ggggggctcc
      241 gctccccgcc tgacccctgt agcccccagc catcaaagtg aaggctcctc ggactttaca
      301 agctggagga cggaccggtc ggaactgtca gctgctccgg gtcaaggtct agcccacagc
      361 caccttcccg tgccaccccc atcccatcat ctccaaacgc tcccaattca ctggtgagcg
      421 ctgcgggccg ggggctggat gcggggacgg ccgcgatggc cccgcgcgcg ggacagcggg
      481 ggctctggag cccgctgcca gggctgctgc tcttggcggc ggcgctgagc cggcccgccg
      541 cgccctgtcc cttccagtgt tactgcttcg gcagcccccg gttaatgttg cgctgcgcgt
      601 cgggcgcgga gctccggcag ccgccccggg acgtgccacc cgacgcgcgc aacctcacca
      661 tcgtgggcgc caacctgacc gtgctgcgcg ccgcagcctt cgcgggaggg ggcgaggggg
      721 cgacggacgg cgtgcgccta ccgctcctta ccgcgctgcg cctcacacac aacaacatcg
      781 aggtagtaga ggacggtgcc ttcgacgggt tgcccagcct ggcggcactc gacctaagcc
      841 acaacccgct acgcgccctg ggctaccgcg cctttcgcgg gctgcctgcg ctgcgctcac
      901 tacagctcaa tcacgcgctg gctcgaggca gccccgggat gctggatgca ctggacgccg
      961 ctctggcccc cctggccgag cttcgcctgc tgggcttggt aggcaacgcg ctgagccgcc
     1021 tgccactcgc cgcgctgcgc ctgccccgcc tggagcagct ggatgcgcgt gtcaacgcgc
     1081 tggccggcct gggcccggac gagctgagcg cgcttgagcg cgatggcgac ctgccccagc
     1141 cgcgcctgct gctggcggac aacccactga gctgtgggtg cacctcgcgc cccctgctgg
     1201 cctggctgca caacgccacc gagcgcgtac ccgacgcgcg ccgcctgcgc tgcgcttccc
     1261 cgcgcgtact gttggaccgg cctctgatag acctggacga ggcgcgacta ggttgctccg
     1321 acggcgatgc acacgagagc ggggaaggga tagacgtcgc cggcccggag ttggaagcct
     1381 cttacgtctt cttcgggctg gtgctggcac tcatcggcct catcttcctc atggtgctct
     1441 acctaaaccg ccgcggcatc caacgctgga tgcacaattt gcgcgaggcc tgcagagatc
     1501 agatggaggg ctaccactac cgctacgagc aggatgcaga cccacgccgc gcgcctgctc
     1561 cggccgcccc tgccggctcc cgggccactt ctccaggctc gggtctctga gcatcacctc
     1621 cctagtggga ggctgttcct atcagctgat gactttactt gggccatgca gcctttctct
     1681 gcctggcctg ggccccggag ataacacact tacgagtttg gatctctgag acctttggat
     1741 caatcgtagt atctctccca tacagaaatt ccaaggtgta ctctttccct ggccttagag
     1801 tttccagatc aaaaacccag aaatctgttt tcagaaacaa atcctgcctg ccggtcctta
     1861 ctggaccatt gaaattgaaa ttccttctcc ctgtccaggc tcacccaaag atcctgctct
     1921 tccattttga aatctctagc actttctcca cctttctata tgctttaagc cagacaccct
     1981 ggctagattg cactgacccc tgctccaggg tagaagacct cagtcccttt ctcagagttc
     2041 tggggggagg gggggtctac ccttctggtc tctttggaag gtttttatga agtttgagct
     2101 ttttgtccca cctcagaact ctgggctctc catcatgtaa cccaaatctg aaggctttca
     2161 gtggtctcct ctaatctgat ttgcttcata ccctggttct agctcaggcc cttccattcc
     2221 ttgctcttgg ctgggtttca gctccggcct tgtctctttc atgccagggg caaggaaggc
     2281 ttggtgtaga atccaagcct tagcctttct gttgcggctc taatgtccca acagagtttg
     2341 tcctccatct aaaagtcagc tcttcacccc agtcactttc atgccctggc ccaagtctta
     2401 ggctctcagt ccccttgaca tccatcgctg gcacttttac cattcattga ccaggggcca
     2461 gagagggctc ttcccccatg gtggggtgct acccactgcc ctcctaggag atgttctccc
     2521 atcctgcagg acaagtaaaa gcacccccat agcatatagg cagacttgag ggaggaaggg
     2581 agcaggtggg gtgagcaggg tctccaatcc agggccactg gtctgtctgg aaacgtgagg
     2641 cttggagctg ctgcccatct gtgctctgtg cttcaccatc cacacggtcc tcccctggga
     2701 actccttgct accacctctc atgccttctg gaaggggatg gagtctgacc tcttgtctca
     2761 gtctcagtgg aaagctttcc tggtcaaggt catggcctca gtgccctgcc ttctgcatga
     2821 tcccaaagca caatggtgag tgagggggaa ctgcctccct gcctctcacc ctaagtcagg
     2881 cagaatggca ggcctgtgct gcctctgcac aggaaggtct tcctcctctg tatatcggct
     2941 tgaggcccgc tgtccccatc ctcaactgag aaatctggac ctcccttggg ctgttttcta
     3001 taaagtctgc aataatctcc gatgctctct gctcttg
//
