LOCUS       NM_025365                972 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus translocase of outer mitochondrial membrane 6 (Tomm6),
            transcript variant 2, mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_025365 XM_912194
VERSION     NM_025365.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 972)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   3  (bases 1 to 972)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 972)
  AUTHORS   Chung,Y.C., Tsai,Y.J., Shiu,T.Y., Sun,Y.Y., Wang,P.F. and Chen,C.L.
  TITLE     Screening large numbers of expression patterns of transcription
            factors in late stages of the mouse thymus
  JOURNAL   Gene Expr Patterns 11 (1-2), 84-92 (2011)
   PUBMED   20932939
REFERENCE   5  (bases 1 to 972)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC089325.1, AK010470.1 and CA321392.1.
            
            On Sep 15, 2009 this sequence version replaced NM_025365.2.
            
            Transcript Variant: This variant (2) differs in the 3' UTR compared
            to variant 1. Both variants 1 and 2 encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CA321392.1, AK010470.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-288               BC089325.1         60-347
            289-952             AK010470.1         1-664
            953-972             CA321392.1         537-556
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 23.87 cM"
     gene            1..972
                     /gene="Tomm6"
                     /gene_synonym="1110002E23Rik"
                     /note="translocase of outer mitochondrial membrane 6"
                     /db_xref="GeneID:66119"
                     /db_xref="MGI:MGI:1913369"
     exon            1..488
                     /gene="Tomm6"
                     /gene_synonym="1110002E23Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             361..585
                     /gene="Tomm6"
                     /gene_synonym="1110002E23Rik"
                     /note="overexpressed breast tumor protein homolog;
                     translocase of outer membrane 6 kDa subunit homolog;
                     translocase of outer mitochondrial membrane 6 homolog"
                     /codon_start=1
                     /product="mitochondrial import receptor subunit TOM6
                     homolog"
                     /protein_id="NP_079641.1"
                     /db_xref="CCDS:CCDS37643.1"
                     /db_xref="GeneID:66119"
                     /db_xref="MGI:MGI:1913369"
                     /translation="MASSGVTVSAAGSASEASEVPDNVGDWLRGVFRFATDRNDFRRN
                     LILNLGLFAAGVWLARNLSDIDLMAPQPGV"
     exon            489..589
                     /gene="Tomm6"
                     /gene_synonym="1110002E23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            590..953
                     /gene="Tomm6"
                     /gene_synonym="1110002E23Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      839..844
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tomm6"
                     /gene_synonym="1110002E23Rik"
                     /note="hexamer: AATAAA"
     polyA_site      858
                     /gene="Tomm6"
                     /gene_synonym="1110002E23Rik"
                     /note="major polyA site"
ORIGIN      
        1 attggtactg cacgctctct gacctgaaag acactttctt gggagcatcc cactgcccag
       61 cgcctacagg gtgagctaac ccctatccgc agaggctggg ctagcctcac cgtcatcacc
      121 ttgcttaaac taactgggtt gtagagcagc actgggaacc gacccccgtc cctgggaggc
      181 ggggccgcgg ggctccgcct ccgatcaggc gtcctggctc tacgaactcc tggaggaggt
      241 gggggcgggc cttctcgctc atttcttacg ctgatcggcg gaagtgcgga gatcggaagt
      301 tgcgcaatcg gcttgcgacg acccggtgcg acgctcggtt ggtacgtgct tagtgctggt
      361 atggcttcca gcggagtgac ggtgagcgcc gccgggtcgg ccagcgaggc ctcagaggtt
      421 ccagacaacg tgggagactg gctccgcggt gtcttccgct tcgccaccga tcgaaacgac
      481 ttccggagga acttgatcct caatttggga ctctttgctg cgggagtctg gctggccagg
      541 aacttgagtg acattgattt gatggcccct cagccagggg tgtagccaga gaatggaact
      601 cctgtgtatt cagactttcc aaagacagcc tactgtctgt gaccacaaga tcctacctga
      661 gtggcagctg aagttgactc cctctccttg cctgaacccc cccccactgc ccccccatcc
      721 cccagtgtcg gctgagatgt tgcctctgca cggttctgtg tgcagttccc aactttctgc
      781 agaagatggt ccttgccctt gtcctgaaga gtagtaatgg ttcttgaaaa agatttcaaa
      841 taaagcctgc acataaaaga caggtatttt attcttttaa taagaaactt attacaaaaa
      901 caaggtgtaa aaagtccgct tacaaaaatc aaataaacat gacttgtatt tcaaaaaaaa
      961 aaaaaaaaaa aa
//
