LOCUS       XM_036166243            4605 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus transportin 3 (Tnpo3), transcript variant
            X5, mRNA.
ACCESSION   XM_036166243
VERSION     XM_036166243.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4605
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..4605
                     /gene="Tnpo3"
                     /gene_synonym="5730544L10Rik; C430013M08Rik; D6Ertd313e;
                     mKIAA4133; Trn-SR"
                     /note="transportin 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 40 ESTs, 1842
                     long SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 11 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:320938"
                     /db_xref="MGI:MGI:1196412"
     CDS             976..3567
                     /gene="Tnpo3"
                     /gene_synonym="5730544L10Rik; C430013M08Rik; D6Ertd313e;
                     mKIAA4133; Trn-SR"
                     /codon_start=1
                     /product="transportin-3 isoform X3"
                     /protein_id="XP_036022136.1"
                     /db_xref="GeneID:320938"
                     /db_xref="MGI:MGI:1196412"
                     /translation="MKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLAL
                     AIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTE
                     IIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLA
                     LLFEVLQQDKTSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAV
                     AREDLDKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEIS
                     FNFWYRLGEHLYKTNDEVIHSIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFR
                     MRVSDLVKDLIFLIGSMECFAQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPT
                     LVEVLEGVVHLPETVHTAVRYTSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLA
                     SAAAKAIHNICSVCRDHMAQHFNGLLEIAHSLDSFMLSPEAAVGLLKGTALVLARLPL
                     DKITECLSELCSVQVMALKKLLSQEPSNGISSDPTVFLDRLAVIFRHTNPIVENGQTH
                     PCQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVN
                     VYHVHQHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCIPTFQLLEQQNGLQNHPDT
                     VDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTTLDHRDANSSVMRFLRDLIHTG
                     VANDLSVFLQHEEDFELRKELIGQVMSQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLW
                     EIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHKQVTSAEECKQVCWALR
                     DFTRLFR"
ORIGIN      
        1 ctatggggat caaagattgc ctctttctag ggctaataat tctgctgttt ccttgtttta
       61 agttgttgtt tctttcatag agacgatatg tgggctagaa gttatcttaa attatagttt
      121 agatctgggg ctgtggccca gttggtaggt tgcttgtcta gcatgcataa agccatggat
      181 ttgattccca gttctgcata aaccaggggt ggtggtgcat gcctgtaatg ctaaccactt
      241 gggaggtgga gatgggaaga ctgctacaca ctgagtttga ggccagctga catgagaccc
      301 taacttaaaa atgccagaga aaggttggtt ctgtagtcct atctggaaac tgaatgatga
      361 aaagtataaa aaaaaaaaaa aaaaagatga aataaagtca tgctttagtg gactcagttg
      421 atattttggt atataatttg tcacatgtcc atggaaattt tcttaaagta gcatgtcaga
      481 aaggttatgg gccatggcta tcagtttctg atttcttttc tatttctttt cccttttgga
      541 attttaaaac atttatttag gagacaaact cttaagaagc aagcctttct gcctacatgg
      601 tgtagcagct gtgcttctca gctgcacatt cacacacaaa agatttcaga atctttttcc
      661 tttcgatcac aggttggttc attttccttt ggtggcctaa tgtgtgtctt ccaggattct
      721 tctcatcata cttagcagtc tctttgaaat gtgctgctag tgggagctgc agcttcctcc
      781 tgctgactct gagccccagg cttcagttga gatggccctt tgagaatgtg gagcttagtc
      841 caagcctgga tttcagtggg tagcacctgg catctgtgcc tagaaagtcc ttgaagtgtt
      901 cacgcttggg agatttctga tcaattgtta cagatccgac aggatgtgga atcatgctat
      961 ttcgctgccc agaccatgaa aatgaagatt cagacctcat tttatgagct ccccacagac
     1021 tctcatgctt ctttaaggga ctcattgcta actcacattc agaacttgaa agacttgtcg
     1081 cctgtcattg taacacagct ggctttagca atagcagacc tcgccctaca gatgccttct
     1141 tggaaaggat gcgtacaaac attggtagaa aaatatagca atgacgtaac ttctttacct
     1201 tttttgctgg aaatccttac agtgttaccc gaagaagtac atagtcgttc cttgcggatt
     1261 ggggccaaca ggcggacaga aattatagaa gacttagcct tctactctag taccgtggta
     1321 tctttattga tgacatgtgt agagaaagca ggaaccgatg agaagatgct tatgaaggtc
     1381 ttccgatgtt tgggaagttg gtttaacttg ggggttttgg acagtaactt catggctaat
     1441 aataagttat tagcactcct ttttgaggtc ttgcaacaag ataagacctc atctaaccta
     1501 cacgaagctg cttcagactg tgtatgctca gctctctatg ctattgaaaa tgtagagact
     1561 aacttgccat tggccatgca gctttttcag ggagtcctga cattggagac tgcatatcat
     1621 atggctgtgg cacgggaaga tttggacaaa gttctgaatt actgccgaat tttcaccgaa
     1681 ctatgtgaaa ctttcctgga aaaaattgtc tgtactccag gccaaggtct gggagatctt
     1741 cgaactttgg aattgcttct tatctgtgca ggccaccctc agtatgaggt agtagaaatt
     1801 tcctttaact tttggtaccg actaggagaa catttataca aaaccaatga tgaagttatt
     1861 cacagcatct tcaaagcgta cattcagagg ctgcttcatg ccttggctcg acactgccag
     1921 ttggaaccag accatgaggg agttcctgaa gagaccgatg actttgggga gtttcgaatg
     1981 agagtgtcag acctggtgaa ggacttgatc ttcctgattg gatctatgga gtgttttgct
     2041 cagttgtatt ctactctgaa ggaaggcaac ccaccctggg aggtgacaga agcggttctc
     2101 tttatcatgg ctgctatagc aaagagtgtg gatccggaga acaaccctac acttgtggag
     2161 gtactagagg gagttgtcca tctcccagag accgtgcata cagctgtgcg gtacactagc
     2221 attgagttgg ttggtgagat gagtgaagtg gtggaccgga atccccagtt cctggaccct
     2281 gtattgggct atttgatgaa aggcctgtgt gaaaagcctc tggcttctgc tgcagccaaa
     2341 gccattcata acatttgttc cgtttgtcgc gatcatatgg ctcagcactt taatggactc
     2401 ctagaaattg cccactccct tgattctttc atgttgtctc ccgaagctgc tgtgggtttg
     2461 ctaaaaggaa cagctcttgt cctagcaaga ctacctttgg ataagattac agaatgtcta
     2521 agtgagttat gttctgttca ggttatggca ttgaaaaagc tgttgtctca ggagcccagc
     2581 aatggcattt cttcagatcc cactgtcttc ttagatcgcc tggcagtaat atttagacac
     2641 accaatccta ttgtagaaaa tggacagact catccatgcc aaaaagtcat ccaggaaata
     2701 tggccagttt tgtctgagac tctaaataag caccgagccg acaatcgaat tgtagagcgt
     2761 tgttgtagat gcctgcgctt tgcggttcgt tgtgtaggca aaggatctgc agcactgcta
     2821 cagccactag ttacacagat ggtgaatgtg taccatgtac atcagcattc ctgtttcctc
     2881 taccttggca gtatccttgt ggatgagtac ggcatggaag aaggctgtcg gcaggggtta
     2941 ttagacatgc tccaggcgct atgcattccc acctttcagc tcctagaaca gcagaatggc
     3001 ctccaaaatc accctgacac tgtagatgac ctattcaggt tagccacccg atttattcag
     3061 cgaagccctg tcaccttgct gaggagccag gttgtcatcc caatcttaca gtgggccatt
     3121 gcatcaacca ctttggacca ccgagatgcc aattccagtg tcatgagatt tctgcgagac
     3181 ctcatccaca caggagtagc caatgattta tctgttttct tacagcatga agaagatttt
     3241 gaattgcgga aggaactaat tggacaggtg atgagccagc ttggccagca acttgtcagc
     3301 cagctgctcc acacatgctg cttttgtctt cccccctaca ccctacccga cgtggctgaa
     3361 gtgctctggg agatcatgca ggttgacaga ccgactttct gtcggtggct agagaattcc
     3421 ttgaaaggtt tgccaaaaga gaccacagtg ggagctgtca cagtgacaca taaacaactt
     3481 acagatttcc acaagcaagt cactagtgcc gaggaatgta agcaagtttg ctgggccttg
     3541 agagacttca ccaggttgtt tcgatagctc aagctcacac tcctgcactg tgcctgtcat
     3601 ccaggaatgt ctttttttat tagaagacag gaagaaaaca acccagactg tgtcccacaa
     3661 tcagaaacct ctgttgtggc agaggggcct tcactaccac cagaccatcc cgccacacag
     3721 ggagagactt caccctccaa ggcatcctaa ggagtccctg tttgggatgt gagggagaaa
     3781 cagcgcggtt tttaaggatg gctggagcct gtccgacgtg gtgggagggg aactagtttc
     3841 ctggtgaact tctttctaaa aggaaaaata atttaagaaa agttaaaaaa agaaagaaaa
     3901 tttttaaaaa ggaaagctga gatgacacca gaactgaaat atgcacctgg tagcagatga
     3961 tgcacacaca tgatagacac acaccagcat gcagtgcaca cactgagaca cgacagtgag
     4021 acagacacat taccttaggg aagcgcgggg atgcgagtag gtaacatagt tacagttgga
     4081 attaaagagg tagggtcacc tcctctgctc tccttccttt aaacacaggt gaatagagga
     4141 aacacccccc cccccaactg ttcaccttta gaaatgtcca gacaaggagc ctggtctgct
     4201 tatatcatgg ttagggatga tagtccggac tagccagggt caaagttgct tttaatgtag
     4261 agcccaaccc tgatcctatt gagttgctaa gtccaatcca gttcatgggc ctttgtcatc
     4321 agccttgggg agaaaagcca aaactggtgg gtggagagga caaatatgga ttaaaccttg
     4381 ctctctctct cttttagtga attattcatc cacaaacatg gggtgggaag ggataaaaaa
     4441 gagggtgaga gtctggaggg aatgtattta cagggctacc tgtattttgc taaaaaaaaa
     4501 aaaaaagtgt gaaaattaat tgccttcaag ggcactgttc tgtcctgtgg tgtagccatc
     4561 ttatgaataa atcaacagca ccaaaaaaaa aaaaaaaaaa aaaaa
//
