LOCUS       XM_006505121            4421 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus transportin 3 (Tnpo3), transcript variant
            X3, mRNA.
ACCESSION   XM_006505121
VERSION     XM_006505121.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006505121.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4421
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..4421
                     /gene="Tnpo3"
                     /gene_synonym="5730544L10Rik; C430013M08Rik; D6Ertd313e;
                     mKIAA4133; Trn-SR"
                     /note="transportin 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 44 ESTs, 1865
                     long SRA reads, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments, including 36 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:320938"
                     /db_xref="MGI:MGI:1196412"
     CDS             792..3383
                     /gene="Tnpo3"
                     /gene_synonym="5730544L10Rik; C430013M08Rik; D6Ertd313e;
                     mKIAA4133; Trn-SR"
                     /codon_start=1
                     /product="transportin-3 isoform X3"
                     /protein_id="XP_006505184.1"
                     /db_xref="GeneID:320938"
                     /db_xref="MGI:MGI:1196412"
                     /translation="MKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLAL
                     AIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTE
                     IIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLA
                     LLFEVLQQDKTSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAV
                     AREDLDKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEIS
                     FNFWYRLGEHLYKTNDEVIHSIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFR
                     MRVSDLVKDLIFLIGSMECFAQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPT
                     LVEVLEGVVHLPETVHTAVRYTSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLA
                     SAAAKAIHNICSVCRDHMAQHFNGLLEIAHSLDSFMLSPEAAVGLLKGTALVLARLPL
                     DKITECLSELCSVQVMALKKLLSQEPSNGISSDPTVFLDRLAVIFRHTNPIVENGQTH
                     PCQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVN
                     VYHVHQHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCIPTFQLLEQQNGLQNHPDT
                     VDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIASTTLDHRDANSSVMRFLRDLIHTG
                     VANDLSVFLQHEEDFELRKELIGQVMSQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLW
                     EIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHKQVTSAEECKQVCWALR
                     DFTRLFR"
ORIGIN      
        1 aggaggcgtg ccgggaagga ggcagtttgt ggtgcaccag gcggaagtgt gccaaagtct
       61 acggacggcc acttccggcc cggggaagcc ctgcttcggc tcgctgcgtg gttcgtgtca
      121 tgcggaggta ggcctctgcg agcaaggcgg gaggtgcaga agccagaacc cgtgtccgga
      181 ctcgagagtc tgcgattctg gcgggaagac aagacaaaaa ggaggcagga acctgaaagc
      241 gacctctccg ctgtttccga gggggcaact tccacgagga accccccttc cctggtaacg
      301 gccagaaagg aggagatggc gccagtcagg gagcggctgt ggccgagaca gtgaggacgc
      361 ttgaaggcag agcaagcgga agcctaggga ggagtatcgg gctctttgct gtcatcgccg
      421 ccgctcccgc cagcatggag ggagccaagc caaccttgca gctcgtgtac caggcggtgc
      481 aagcgcttta ccacgacccg gatcccagcg gaaaggagcg cgcctcgttt tggcttgggg
      541 agctgcagcg ttcgtctctt tgaaatgtgc tgctagtggg agctgcagct tcctcctgct
      601 gactctgagc cccaggcttc agttgagatg gccctttgag aatgtggagc ttagtccaag
      661 cctggatttc agtgggtagc acctggcatc tgtgcctaga aagtccttga agtgttcacg
      721 cttgggagat ttctgatcaa ttgttacaga tccgacagga tgtggaatca tgctatttcg
      781 ctgcccagac catgaaaatg aagattcaga cctcatttta tgagctcccc acagactctc
      841 atgcttcttt aagggactca ttgctaactc acattcagaa cttgaaagac ttgtcgcctg
      901 tcattgtaac acagctggct ttagcaatag cagacctcgc cctacagatg ccttcttgga
      961 aaggatgcgt acaaacattg gtagaaaaat atagcaatga cgtaacttct ttaccttttt
     1021 tgctggaaat ccttacagtg ttacccgaag aagtacatag tcgttccttg cggattgggg
     1081 ccaacaggcg gacagaaatt atagaagact tagccttcta ctctagtacc gtggtatctt
     1141 tattgatgac atgtgtagag aaagcaggaa ccgatgagaa gatgcttatg aaggtcttcc
     1201 gatgtttggg aagttggttt aacttggggg ttttggacag taacttcatg gctaataata
     1261 agttattagc actccttttt gaggtcttgc aacaagataa gacctcatct aacctacacg
     1321 aagctgcttc agactgtgta tgctcagctc tctatgctat tgaaaatgta gagactaact
     1381 tgccattggc catgcagctt tttcagggag tcctgacatt ggagactgca tatcatatgg
     1441 ctgtggcacg ggaagatttg gacaaagttc tgaattactg ccgaattttc accgaactat
     1501 gtgaaacttt cctggaaaaa attgtctgta ctccaggcca aggtctggga gatcttcgaa
     1561 ctttggaatt gcttcttatc tgtgcaggcc accctcagta tgaggtagta gaaatttcct
     1621 ttaacttttg gtaccgacta ggagaacatt tatacaaaac caatgatgaa gttattcaca
     1681 gcatcttcaa agcgtacatt cagaggctgc ttcatgcctt ggctcgacac tgccagttgg
     1741 aaccagacca tgagggagtt cctgaagaga ccgatgactt tggggagttt cgaatgagag
     1801 tgtcagacct ggtgaaggac ttgatcttcc tgattggatc tatggagtgt tttgctcagt
     1861 tgtattctac tctgaaggaa ggcaacccac cctgggaggt gacagaagcg gttctcttta
     1921 tcatggctgc tatagcaaag agtgtggatc cggagaacaa ccctacactt gtggaggtac
     1981 tagagggagt tgtccatctc ccagagaccg tgcatacagc tgtgcggtac actagcattg
     2041 agttggttgg tgagatgagt gaagtggtgg accggaatcc ccagttcctg gaccctgtat
     2101 tgggctattt gatgaaaggc ctgtgtgaaa agcctctggc ttctgctgca gccaaagcca
     2161 ttcataacat ttgttccgtt tgtcgcgatc atatggctca gcactttaat ggactcctag
     2221 aaattgccca ctcccttgat tctttcatgt tgtctcccga agctgctgtg ggtttgctaa
     2281 aaggaacagc tcttgtccta gcaagactac ctttggataa gattacagaa tgtctaagtg
     2341 agttatgttc tgttcaggtt atggcattga aaaagctgtt gtctcaggag cccagcaatg
     2401 gcatttcttc agatcccact gtcttcttag atcgcctggc agtaatattt agacacacca
     2461 atcctattgt agaaaatgga cagactcatc catgccaaaa agtcatccag gaaatatggc
     2521 cagttttgtc tgagactcta aataagcacc gagccgacaa tcgaattgta gagcgttgtt
     2581 gtagatgcct gcgctttgcg gttcgttgtg taggcaaagg atctgcagca ctgctacagc
     2641 cactagttac acagatggtg aatgtgtacc atgtacatca gcattcctgt ttcctctacc
     2701 ttggcagtat ccttgtggat gagtacggca tggaagaagg ctgtcggcag gggttattag
     2761 acatgctcca ggcgctatgc attcccacct ttcagctcct agaacagcag aatggcctcc
     2821 aaaatcaccc tgacactgta gatgacctat tcaggttagc cacccgattt attcagcgaa
     2881 gccctgtcac cttgctgagg agccaggttg tcatcccaat cttacagtgg gccattgcat
     2941 caaccacttt ggaccaccga gatgccaatt ccagtgtcat gagatttctg cgagacctca
     3001 tccacacagg agtagccaat gatttatctg ttttcttaca gcatgaagaa gattttgaat
     3061 tgcggaagga actaattgga caggtgatga gccagcttgg ccagcaactt gtcagccagc
     3121 tgctccacac atgctgcttt tgtcttcccc cctacaccct acccgacgtg gctgaagtgc
     3181 tctgggagat catgcaggtt gacagaccga ctttctgtcg gtggctagag aattccttga
     3241 aaggtttgcc aaaagagacc acagtgggag ctgtcacagt gacacataaa caacttacag
     3301 atttccacaa gcaagtcact agtgccgagg aatgtaagca agtttgctgg gccttgagag
     3361 acttcaccag gttgtttcga tagctcaagc tcacactcct gcactgtgcc tgtcatccag
     3421 gaatgtcttt ttttattaga agacaggaag aaaacaaccc agactgtgtc ccacaatcag
     3481 aaacctctgt tgtggcagag gggccttcac taccaccaga ccatcccgcc acacagggag
     3541 agacttcacc ctccaaggca tcctaaggag tccctgtttg ggatgtgagg gagaaacagc
     3601 gcggttttta aggatggctg gagcctgtcc gacgtggtgg gaggggaact agtttcctgg
     3661 tgaacttctt tctaaaagga aaaataattt aagaaaagtt aaaaaaagaa agaaaatttt
     3721 taaaaaggaa agctgagatg acaccagaac tgaaatatgc acctggtagc agatgatgca
     3781 cacacatgat agacacacac cagcatgcag tgcacacact gagacacgac agtgagacag
     3841 acacattacc ttagggaagc gcggggatgc gagtaggtaa catagttaca gttggaatta
     3901 aagaggtagg gtcacctcct ctgctctcct tcctttaaac acaggtgaat agaggaaaca
     3961 cccccccccc caactgttca cctttagaaa tgtccagaca aggagcctgg tctgcttata
     4021 tcatggttag ggatgatagt ccggactagc cagggtcaaa gttgctttta atgtagagcc
     4081 caaccctgat cctattgagt tgctaagtcc aatccagttc atgggccttt gtcatcagcc
     4141 ttggggagaa aagccaaaac tggtgggtgg agaggacaaa tatggattaa accttgctct
     4201 ctctctcttt tagtgaatta ttcatccaca aacatggggt gggaagggat aaaaaagagg
     4261 gtgagagtct ggagggaatg tatttacagg gctacctgta ttttgctaaa aaaaaaaaaa
     4321 aagtgtgaaa attaattgcc ttcaagggca ctgttctgtc ctgtggtgta gccatcttat
     4381 gaataaatca acagcaccaa aaaaaaaaaa aaaaaaaaaa a
//
