LOCUS       XM_006535520            8515 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TRAF2 and NCK interacting kinase (Tnik),
            transcript variant X4, mRNA.
ACCESSION   XM_006535520
VERSION     XM_006535520.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006535520.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8515
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..8515
                     /gene="Tnik"
                     /gene_synonym="1500031A17Rik; 4831440I19Rik;
                     C530008O15Rik; C630040K21Rik"
                     /note="TRAF2 and NCK interacting kinase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 mRNAs, 26 ESTs, 1351 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:665113"
                     /db_xref="MGI:MGI:1916264"
     CDS             398..4435
                     /gene="Tnik"
                     /gene_synonym="1500031A17Rik; 4831440I19Rik;
                     C530008O15Rik; C630040K21Rik"
                     /codon_start=1
                     /product="traf2 and NCK-interacting protein kinase isoform
                     X4"
                     /protein_id="XP_006535583.1"
                     /db_xref="GeneID:665113"
                     /db_xref="MGI:MGI:1916264"
                     /translation="MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRH
                     VKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW
                     LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL
                     LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS
                     LGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQ
                     RPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKRGEKDETEYEYSGSEEEEEEND
                     SGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQ
                     KRIEEQKEQRRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQ
                     LEEQRQAERLQRQLKQERDYLVSLQHQRQEQRPLEKKPLYHYKEGMSPSEKPAWAKEV
                     EERSRLNRQSSPAMPHKVANRISDPNLPPRSESFSISGVQPARTPPMLRPVDPQIPQL
                     VAVKSQGPALTASQSVHEQPTKGLSGFQEALNVTSHRVEMPRQNSDPTSENPPLPTRI
                     EKFDRSSWLRQEEDIPPKVPQRTTSISPALARKNSPGNGSALGPRLGSQPIRASNPDL
                     RRTEPVLESSLQRTSSGSSSSSSTPSSQPSSQGGSQPGSQAGSSERSRVRANSKSEGS
                     PVLPHEPSKVKPEESRDITRPSRPASYKKAIDEGEMDLTALAKELRELRIEETNRPLK
                     KVTDYSSSSEESESSEEEEEDGESETHDGTVAVSDIPRLIPTGAPGNNEQYNMGMVGT
                     HGLETSHADTFGGSISREGTLMIRETAEEKKRSGHSDSNGFAGHINLPDLVQQSHSPA
                     GTPTEGLGRVSTHSQEMDSGAEYGIGSSTKASFTPFVDPRVYQTSPTDEDEEDDESSA
                     AALFTSELLRQEQAKLNEARKISVVNVNPTNIRPHSDTPEIRKYKKRFNSEILCAALW
                     GVNLLVGTENGLMLLDRSGQGKVYNLINRRRFQQMDVLEGLNVLVTISGKKNKLRVYY
                     LSWLRNRILHNDPEVEKKQGWITVGDLEGCIHYKVVKYERIKFLVIALKNAVEIYAWA
                     PKPYHKFMAFKSFADLQHKPLLVDLTVEEGQRLKVIFGSHTGFHVIDVDSGNSYDIYI
                     PSHIQGNITPHAIVILPKTDGMEMLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAY
                     IHSNQIMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVNPFQLCFSVCIL
                     RDHQVPVKPSFSFILTQVTSVFNDQ"
ORIGIN      
        1 ggttctccac ccccacctcc cagctgagtg gaggagttga tatgtctcat tataacagcc
       61 aatgcagccg ccatccacgc acaagcaaag aagcatgtcc catttaaata cacccacgca
      121 gccccagcgc ccttagccga tcagggcgcg cagcccacac gcaccgcggc tccgggcttg
      181 gagatccgcg caggtcgggc tccgggatcc cgcggatcga cgctctcgga agatcgggat
      241 cggactcttg ctggggcccg ggtgggcggg ggaggctggg ccccgggcct ctctggcgga
      301 cagccgcatg aggacgcgag cgaaatagac cggggtggaa ttgccaagga agacgcttcg
      361 gggtggtttt ggtccatttc tcccgcgaag agtcgacatg gcgagcgact ccccagctcg
      421 cagcctggat gaaatcgatc tctccgccct gagggaccct gcagggatct ttgagttggt
      481 ggaacttgtc ggaaatggca cgtatggtca agtttataag ggtcgtcatg tcaaaacggg
      541 ccagcttgct gccattaagg ttatggatgt cacaggggat gaagaggaag aaatcaaaca
      601 agaaattaac atgttgaaga aatattctca tcacaggaac attgctacat actacggtgc
      661 ttttatcaaa aagaaccctc ctggcatgga tgaccaactc tggttggtta tggagttctg
      721 tggtgctggc tctgtcactg acctgatcaa gaacacgaaa ggcaacacat tgaaagagga
      781 gtggattgca tacatctgca gggagatctt acggggcctg agtcacctgc accagcacaa
      841 agtgattcat cgagatatca aagggcagaa cgtcttgttg actgaaaatg cagaggttaa
      901 gctagtggat tttggagtga gtgcccagct tgaccgaact gtgggcagga ggaacacgtt
      961 catcgggact ccctactgga tggcaccaga agtcattgcc tgtgatgaga acccggatgc
     1021 cacatatgat ttcaagagtg acttgtggtc tttgggaatc accgccattg agatggcaga
     1081 aggtgccccc cccctctgtg acatgcatcc catgagagcc ctcttcctca tcccacggaa
     1141 ccctgcacct cggctcaagt ctaagaagtg gtcaaaaaaa ttccagtcat ttatcgagag
     1201 ctgcttggta aagaatcaca gccagcggcc agccacggag cagttgatga agcacccatt
     1261 catacgagac caacctaatg agaggcaggt ccgcatccag ctgaaggacc acattgatcg
     1321 aacaaagaag aagcgaggag aaaaagatga gactgagtat gaatacagcg gaagtgagga
     1381 agaagaggaa gagaatgact ctggggaacc cagctccatt ctgaacctac caggggagtc
     1441 aacactgcga agggacttcc tgagactgca gctggccaac aaggagcgct cagaggccct
     1501 gcggcgccaa cagctggagc agcagcagcg ggagaatgaa gaacacaagc ggcagctact
     1561 ggctgagcgc cagaagcgca tcgaagagca gaaggagcaa aggcggaggc tggaggagca
     1621 acaaaggcga gaaaaagagc ttcggaaaca gcaggagcgg gaacagcgcc ggcactacga
     1681 agaacagatg cgtcgggagg aggagaggag gcgtgccgaa catgagcagg aatataagcg
     1741 caaacaattg gaagaacaga gacaagcaga aagactgcag aggcagctaa agcaagagcg
     1801 ggactatctg gtttccctcc agcatcagcg gcaggagcag aggcccctgg agaagaagcc
     1861 actgtaccat tacaaggagg gcatgagtcc tagtgagaag ccggcctggg ccaaggaggt
     1921 agaagaacgc tcaagactca accgacagag ttcacctgcc atgcctcaca aggttgccaa
     1981 caggatctcg gaccccaacc tgcccccaag atcagagtcc ttcagcatta gtggggttca
     2041 gcctgcaagg acacccccaa tgctcagacc tgttgacccc cagatcccgc agctggtagc
     2101 tgtcaaatcc cagggacctg ccttgacggc ctcccagtca gtacatgagc aacccacaaa
     2161 gggcctgtct gggttccagg aggctctgaa tgtgacctct caccgggtcg agatgccacg
     2221 ccagaactcg gatcccacct cagaaaaccc tcctctcccc acgagaattg agaagtttga
     2281 cagaagctct tggttacgac aggaagaaga cattccacca aaggtgcctc aaagaacaac
     2341 ttctatatcc ccagcactag ccagaaagaa ttcccctggc aatggcagtg ctctgggccc
     2401 cagacttgga tctcagccca tcagagcaag caaccctgat ctgcgcagga cagagccagt
     2461 cctggagagt tccctgcagc ggacaagcag tggcagttcc tccagctcca gcactcccag
     2521 ctcccagccc agctcccaag gaggctctca acctggctcc caagcaggat ctagtgagcg
     2581 gtccagagtg cgggccaaca gtaagtccga aggatcaccc gtgctccccc atgagccttc
     2641 caaggtgaaa ccagaagaat ccagagacat cacacggccc agtcggccag ctagctataa
     2701 gaaagctata gatgagggag aaatggatct gacggcatta gccaaagaat tacgagaact
     2761 ccgcattgaa gaaacaaacc gccccctgaa gaaagtgact gattactctt cctccagcga
     2821 ggagtcggag agcagtgagg aagaagagga agatggagag agtgagacac atgacgggac
     2881 ggtggctgtc agtgacatac ccagactaat acccaccgga gctccaggga acaatgagca
     2941 gtacaacatg gggatggtcg ggacacatgg gctggaaact tcgcatgcgg acacctttgg
     3001 cggcagcatt tcaagagaag gaaccttgat gatcagagag acggctgaag agaagaagcg
     3061 atctggccac agtgacagta atggattcgc cggtcacatc aatctcccag accttgtaca
     3121 gcagagccat tcgccagctg gaactcccac tgaggggctg ggccgcgtct ccactcattc
     3181 ccaggagatg gactctgggg ctgaatatgg tatagggagc agcaccaaag cctctttcac
     3241 ccccttcgtg gaccctcgag tgtaccagac atcgcccact gatgaagatg aagaggatga
     3301 tgagtcttca gctgctgccc tgtttactag cgaacttctt aggcaagaac aggccaaact
     3361 caatgaagcg aggaagattt cagtggtaaa tgtgaaccca acaaacattc gccctcatag
     3421 tgacacaccg gaaatcagaa aatacaagaa acgcttcaat tcagaaatac tttgtgcagc
     3481 tctatggggt gtgaaccttc tggtggggac tgaaaatggc ctgatgcttt tggacagaag
     3541 tggccaaggc aaagtctaca acctaatcaa ccggaggcgg tttcagcaga tggatgtgct
     3601 agaaggacta aatgttcttg tcacgatatc aggaaagaag aacaagctcc gtgtgtacta
     3661 tctctcatgg ttaagaaaca gaatcctgca caatgaccca gaagtggaaa agaagcaggg
     3721 ctggatcact gtcggtgact tggaaggctg catccattac aaagtcgtta aatatgaaag
     3781 aatcaagttc ctggtgattg ccttaaagaa tgcagtagag atatatgcgt gggcccctaa
     3841 accttaccat aagttcatgg catttaagtc ttttgcagat cttcagcata agcctctgct
     3901 cgttgacctc acagtagaag aaggtcaaag gttaaaggtc atatttggct cacacactgg
     3961 tttccatgta attgatgttg attctggaaa ctcctacgat atctatatac catcccatat
     4021 tcagggcaat atcactcctc atgctatcgt catcttgcct aaaacagatg gaatggagat
     4081 gcttgtctgc tatgaggatg aaggggtgta cgtgaacacc tacggccgga tcactaagga
     4141 tgtggtgctc caatggggag aaatgcccac atctgtggcc tacattcatt ccaatcagat
     4201 aatgggctgg ggcgagaaag ctattgagat ccggtcagtg gaaacaggac atttggatgg
     4261 agtgtttatg cataaacgag ctcaaaggtt aaagtttcta tgtgaaagaa atgataaggt
     4321 aaatccgttt caactttgct ttagtgtttg cattttaaga gaccaccagg tacctgtgaa
     4381 accttcattt tcctttatac tgactcaagt cacatctgtg ttcaatgatc aatgacaatg
     4441 aagtggcatt acttggtttg attcatgtga acattcagaa tctatgactc atgcatccaa
     4501 accagcataa aacatctctt actttcttgt aaactcttgg tgacttttgt ggcctgaggg
     4561 ccttccagtg acttgacaac cattgtagac tctcctatgc acttagagca gctagcccat
     4621 cattggtcac ctcatagtgg gttagcctta tgccttcact tttaggcctt tcacagagac
     4681 agtgttggga cctagctttc atattatatt cacctttaag tgtagaaaat atgacatgta
     4741 gaaatatgag cttctaaaca atgtcactca ttcctaagaa acatagtcac aaactctact
     4801 cctgccatgt cctgtctcat ttcagccatg tgtctcctga catgtcacaa gggttggggg
     4861 ggggggctac attccaacgg aagtgaccat gtctgtccag catgatctct cgcctcaaag
     4921 gagtatactt aagtggtcat gctctgcctt gccctccctg gagagtaatc cggagtcttt
     4981 aatagctaat ctacatttgt gagcccaccc tttgagacta tgttcacccg accaaccatg
     5041 tccacataga gaataacgtg atgggttgaa ctgtttacat ttctatattc accccagttc
     5101 cccagaggcc agactgctct ttatcccacc ctggtaatat ggatctggat tctttgaccc
     5161 tggctaacta tttctgacct ggtatggtct agtgggcagt agctctggaa gacgaggata
     5221 gttaccaggg gtcttatcag agtatgccag aaaccagtct taacaattga gactccaaca
     5281 cttctgcagt ccctagatcc taagaaatga gatgttctgt gtgttgacca ctatactgta
     5341 gttctcagtg acccacccca gcaggcctgg tccaacccat cctctcgggc tagtgcctct
     5401 agtttactcc ctgagctcac aactagcaac cttttcagca gatctccact cttctccctg
     5461 tttctattcc ctgacccctg agtagctgta gtttcccctg tagctttagc taaatatcaa
     5521 gcaactccac aagcttctta agaagccatg gacaccaagt agcacaaact ttcactagtg
     5581 acacactcat tcctcagacc acagacactg gcttactgaa gggctattgc acagccccat
     5641 atagtatttt cctggggcag tggttcactg acaatcagct caagcaagca gtcatctaaa
     5701 ttctgctcac ttcgcccagg cctttgataa aatgattgaa ctggctcaga cctaatggac
     5761 tgtgcttctg cttattaata ccattatctc ccttggcctg ggatctgcta gcatcagcag
     5821 agagcctaag tgttaaccca aagaacactg taaacactgg ccattgacac tgagccgatg
     5881 cacagtgagg ataggacatg tgagagaaaa tggctggcag ttgaagaaaa agaaggggga
     5941 aaacagaaac ccatgaagtt gaactaactt gtttttaatt tcaaacaggt attttttgca
     6001 tccgtgcgat ctggaggaag tagccaagtg tttttcatga ccctcaacag aaattccatg
     6061 atgaactggt aacagaagag cacttggcac ttatcttcat ggcgttattt ctaatgtaaa
     6121 agaacataac tcatgtggac gtatgccagt ctagaggcag aatcagaagg cctggttgaa
     6181 catactgctc tctccgtttc ctctccctcc atctctccca atatagtcct ttttggtgtt
     6241 gcagcctggt tgagaaggag agaaagaggt ggcgggaatg gctgggcaag cgattccgag
     6301 gatgctgcat tgtctgtgga cagagatgga ccttgtgccc ttcggagtta gggatagaga
     6361 caaatattgt gtgctcttat gattaagctg tgttcatgct ggcttttcag ttctttttgg
     6421 tttggaactt tttaactttt tccccccttt accaccttac tttgtaagaa tggggggaaa
     6481 tgcatactgg gaacatagtc tttttaaaat tctgtctgcc tgctagcttt aagtatatgg
     6541 tatgttgtaa aagttccaac tcccagtagt gagaaacatc gcaataaatg gaccctatct
     6601 ccctgcactg aaggccataa ccacatagtg gggtaattta agaattttct tgccttcact
     6661 aacccaagag gctatttttg ttttgtcttg ttttgtttta ttttatcttt tttttttaat
     6721 tgctactggc taatgaattt ttgaaagaga agcaaaatag ctggttttct cctctctggg
     6781 gaaatagatt ttaaatggct aaactattag ccttaaccta ataaaatcaa ctaccactct
     6841 tgtgagtctg tcaggccata ttttgatatg gccctttctg gaatggaggg tgttgaatgg
     6901 gacagcgatg ccattgagtt gagtgggctt gtgactgggg agggactctg ggatgtgact
     6961 gtccctcaat tattatgcaa cagatcaggg caaaagatgg gatgacaggt gggtcaccca
     7021 gaaggagctt ctgagaaatg agctaatatg tctatgtaaa tacacacatg ttctttcttc
     7081 aaggcacaaa gcctccttga taagaggtcc cttcagttgg gctttgttag gactgtgact
     7141 ggttgagatc tttcccagag ctgggggtac ataacagcca tgctctggaa accctcccaa
     7201 gggtgccact ttctcaacag aaaaactgtg atggagaaga attactaata aatgttcctg
     7261 agctgcctgt gttcttactg ggtcgaggga ctaactagac ttgcaaggct gccgcacaca
     7321 gcaggcacca aaagctcaga ttttagggaa cctaaaggca aggctttgac aaaattctaa
     7381 gactctaatc atgttatgtt cctccaaact ttccaacata ctgttaacaa catctgtgca
     7441 gagatgtgta tgtatttagt tcaggttgac ttgtgtcctt atagaaaccc ttactcgaat
     7501 gatttgaacc tttatgtgac tgactgggat tttcctcaaa gctataagca tggccgccta
     7561 cggtatccag gtgttgcgaa atggtatctg tgctgtgctt cctgttttaa cctacctcgt
     7621 tttgtttgtt tttgtttctc tgttcatcac agcagtgtta tctccaggag acatatagag
     7681 agctcacctg gcaatctcag ctgtattgaa tattttcaaa acagtagttg accaaattgt
     7741 tctttagaaa ttggaggggg aaaaaaaatc tccaatgaca aaaacctaat gcaggttgtt
     7801 tttaaagaat acaattactg taaatggatc aaaaaagaaa gacaaaaact gggattctcc
     7861 tgattttgcc taaagaaatg agcagctgat gtactattaa tgagaacgaa acttatatta
     7921 ggaaaacggc acctttttaa tctggtagtt ggccaaaggg gatgagaaag gggactattc
     7981 tgagttctgg actaggggaa aatctgtaat ctccacaggt gattattgtt tgcagttatc
     8041 tgaagcaggt aacacacaga aatatagtca gggtggtctt caagtgatca ccaggatgcg
     8101 cccgtcatgg tccctctagc tctcaaaggc aatgaaatcc ttccgttctc atttttactg
     8161 ctggggttat gctgccaaac aacattgtcc tcatgaattc catgggacaa attcagcaat
     8221 agatctgggt tgaatttagc aactaccata attggatgct gatatggaca aaaataatgt
     8281 agatttgggt cttgtctcca aatgcgattg ccaccagctc tttatattgc tgctgtgatg
     8341 ttttgaacct gaggcttcct taaattatgt tgcaaactga tctttgtttt aatgttttgt
     8401 ttcgtttcat tatttctaag cgatacatct gaaacacaca gctttaaatg attttttatt
     8461 gtgggacttt gggtacagtt aagaaataaa agggaatcat tgtgtttaaa cataa
//
