LOCUS       XM_006535518            8626 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TRAF2 and NCK interacting kinase (Tnik),
            transcript variant X2, mRNA.
ACCESSION   XM_006535518
VERSION     XM_006535518.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006535518.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8626
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..8626
                     /gene="Tnik"
                     /gene_synonym="1500031A17Rik; 4831440I19Rik;
                     C530008O15Rik; C630040K21Rik"
                     /note="TRAF2 and NCK interacting kinase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 mRNAs, 27 ESTs, 1455 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 28 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:665113"
                     /db_xref="MGI:MGI:1916264"
     CDS             431..4546
                     /gene="Tnik"
                     /gene_synonym="1500031A17Rik; 4831440I19Rik;
                     C530008O15Rik; C630040K21Rik"
                     /codon_start=1
                     /product="traf2 and NCK-interacting protein kinase isoform
                     X2"
                     /protein_id="XP_006535581.1"
                     /db_xref="GeneID:665113"
                     /db_xref="MGI:MGI:1916264"
                     /translation="MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRH
                     VKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW
                     LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL
                     LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS
                     LGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQ
                     RPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKRGEKDETEYEYSGSEEEEEEND
                     SGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQ
                     KRIEEQKEQRRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYIRRQ
                     LEEEQRQLEILQQQLLHEQALLLEYKRKQLEEQRQAERLQRQLKQERDYLVSLQHQRQ
                     EQRPLEKKPLYHYKEGMSPSEKPAWAKEVEERSRLNRQSSPAMPHKVANRISDPNLPP
                     RSESFSISGVQPARTPPMLRPVDPQIPQLVAVKSQGPALTASQSVHEQPTKGLSGFQE
                     ALNVTSHRVEMPRQNSDPTSENPPLPTRIEKFDRSSWLRQEEDIPPKVPQRTTSISPA
                     LARKNSPGNGSALGPRLGSQPIRASNPDLRRTEPVLESSLQRTSSGSSSSSSTPSSQP
                     SSQGGSQPGSQAGSSERSRVRANSKSEGSPVLPHEPSKVKPEESRDITRPSRPASYKK
                     AIDEDLTALAKELRELRIEETNRPLKKVTDYSSSSEESESSEEEEEDGESETHDGTVA
                     VSDIPRLIPTGAPGNNEQYNMGMVGTHGLETSHADTFGGSISREGTLMIRETAEEKKR
                     SGHSDSNGFAGHINLPDLVQQSHSPAGTPTEGLGRVSTHSQEMDSGAEYGIGSSTKAS
                     FTPFVDPRVYQTSPTDEDEEDDESSAAALFTSELLRQEQAKLNEARKISVVNVNPTNI
                     RPHSDTPEIRKYKKRFNSEILCAALWGVNLLVGTENGLMLLDRSGQGKVYNLINRRRF
                     QQMDVLEGLNVLVTISGKKNKLRVYYLSWLRNRILHNDPEVEKKQGWITVGDLEGCIH
                     YKVVKYERIKFLVIALKNAVEIYAWAPKPYHKFMAFKSFADLQHKPLLVDLTVEEGQR
                     LKVIFGSHTGFHVIDVDSGNSYDIYIPSHIQGNITPHAIVILPKTDGMEMLVCYEDEG
                     VYVNTYGRITKDVVLQWGEMPTSVAYIHSNQIMGWGEKAIEIRSVETGHLDGVFMHKR
                     AQRLKFLCERNDKVNPFQLCFSVCILRDHQVPVKPSFSFILTQVTSVFNDQ"
ORIGIN      
        1 cctcccagga agcggtgata gacagttctg tgtggttctc cacccccacc tcccagctga
       61 gtggaggagt tgatatgtct cattataaca gccaatgcag ccgccatcca cgcacaagca
      121 aagaagcatg tcccatttaa atacacccac gcagccccag cgcccttagc cgatcagggc
      181 gcgcagccca cacgcaccgc ggctccgggc ttggagatcc gcgcaggtcg ggctccggga
      241 tcccgcggat cgacgctctc ggaagatcgg gatcggactc ttgctggggc ccgggtgggc
      301 gggggaggct gggccccggg cctctctggc ggacagccgc atgaggacgc gagcgaaata
      361 gaccggggtg gaattgccaa ggaagacgct tcggggtggt tttggtccat ttctcccgcg
      421 aagagtcgac atggcgagcg actccccagc tcgcagcctg gatgaaatcg atctctccgc
      481 cctgagggac cctgcaggga tctttgagtt ggtggaactt gtcggaaatg gcacgtatgg
      541 tcaagtttat aagggtcgtc atgtcaaaac gggccagctt gctgccatta aggttatgga
      601 tgtcacaggg gatgaagagg aagaaatcaa acaagaaatt aacatgttga agaaatattc
      661 tcatcacagg aacattgcta catactacgg tgcttttatc aaaaagaacc ctcctggcat
      721 ggatgaccaa ctctggttgg ttatggagtt ctgtggtgct ggctctgtca ctgacctgat
      781 caagaacacg aaaggcaaca cattgaaaga ggagtggatt gcatacatct gcagggagat
      841 cttacggggc ctgagtcacc tgcaccagca caaagtgatt catcgagata tcaaagggca
      901 gaacgtcttg ttgactgaaa atgcagaggt taagctagtg gattttggag tgagtgccca
      961 gcttgaccga actgtgggca ggaggaacac gttcatcggg actccctact ggatggcacc
     1021 agaagtcatt gcctgtgatg agaacccgga tgccacatat gatttcaaga gtgacttgtg
     1081 gtctttggga atcaccgcca ttgagatggc agaaggtgcc ccccccctct gtgacatgca
     1141 tcccatgaga gccctcttcc tcatcccacg gaaccctgca cctcggctca agtctaagaa
     1201 gtggtcaaaa aaattccagt catttatcga gagctgcttg gtaaagaatc acagccagcg
     1261 gccagccacg gagcagttga tgaagcaccc attcatacga gaccaaccta atgagaggca
     1321 ggtccgcatc cagctgaagg accacattga tcgaacaaag aagaagcgag gagaaaaaga
     1381 tgagactgag tatgaataca gcggaagtga ggaagaagag gaagagaatg actctgggga
     1441 acccagctcc attctgaacc taccagggga gtcaacactg cgaagggact tcctgagact
     1501 gcagctggcc aacaaggagc gctcagaggc cctgcggcgc caacagctgg agcagcagca
     1561 gcgggagaat gaagaacaca agcggcagct actggctgag cgccagaagc gcatcgaaga
     1621 gcagaaggag caaaggcgga ggctggagga gcaacaaagg cgagaaaaag agcttcggaa
     1681 acagcaggag cgggaacagc gccggcacta cgaagaacag atgcgtcggg aggaggagag
     1741 gaggcgtgcc gaacatgagc aggaatacat caggcggcag ctagaagaag agcaaaggca
     1801 gttagagatc ttacagcagc agctactgca tgagcaagct ctacttctgg aatataagcg
     1861 caaacaattg gaagaacaga gacaagcaga aagactgcag aggcagctaa agcaagagcg
     1921 ggactatctg gtttccctcc agcatcagcg gcaggagcag aggcccctgg agaagaagcc
     1981 actgtaccat tacaaggagg gcatgagtcc tagtgagaag ccggcctggg ccaaggaggt
     2041 agaagaacgc tcaagactca accgacagag ttcacctgcc atgcctcaca aggttgccaa
     2101 caggatctcg gaccccaacc tgcccccaag atcagagtcc ttcagcatta gtggggttca
     2161 gcctgcaagg acacccccaa tgctcagacc tgttgacccc cagatcccgc agctggtagc
     2221 tgtcaaatcc cagggacctg ccttgacggc ctcccagtca gtacatgagc aacccacaaa
     2281 gggcctgtct gggttccagg aggctctgaa tgtgacctct caccgggtcg agatgccacg
     2341 ccagaactcg gatcccacct cagaaaaccc tcctctcccc acgagaattg agaagtttga
     2401 cagaagctct tggttacgac aggaagaaga cattccacca aaggtgcctc aaagaacaac
     2461 ttctatatcc ccagcactag ccagaaagaa ttcccctggc aatggcagtg ctctgggccc
     2521 cagacttgga tctcagccca tcagagcaag caaccctgat ctgcgcagga cagagccagt
     2581 cctggagagt tccctgcagc ggacaagcag tggcagttcc tccagctcca gcactcccag
     2641 ctcccagccc agctcccaag gaggctctca acctggctcc caagcaggat ctagtgagcg
     2701 gtccagagtg cgggccaaca gtaagtccga aggatcaccc gtgctccccc atgagccttc
     2761 caaggtgaaa ccagaagaat ccagagacat cacacggccc agtcggccag ctagctataa
     2821 gaaagctata gatgaggatc tgacggcatt agccaaagaa ttacgagaac tccgcattga
     2881 agaaacaaac cgccccctga agaaagtgac tgattactct tcctccagcg aggagtcgga
     2941 gagcagtgag gaagaagagg aagatggaga gagtgagaca catgacggga cggtggctgt
     3001 cagtgacata cccagactaa tacccaccgg agctccaggg aacaatgagc agtacaacat
     3061 ggggatggtc gggacacatg ggctggaaac ttcgcatgcg gacacctttg gcggcagcat
     3121 ttcaagagaa ggaaccttga tgatcagaga gacggctgaa gagaagaagc gatctggcca
     3181 cagtgacagt aatggattcg ccggtcacat caatctccca gaccttgtac agcagagcca
     3241 ttcgccagct ggaactccca ctgaggggct gggccgcgtc tccactcatt cccaggagat
     3301 ggactctggg gctgaatatg gtatagggag cagcaccaaa gcctctttca cccccttcgt
     3361 ggaccctcga gtgtaccaga catcgcccac tgatgaagat gaagaggatg atgagtcttc
     3421 agctgctgcc ctgtttacta gcgaacttct taggcaagaa caggccaaac tcaatgaagc
     3481 gaggaagatt tcagtggtaa atgtgaaccc aacaaacatt cgccctcata gtgacacacc
     3541 ggaaatcaga aaatacaaga aacgcttcaa ttcagaaata ctttgtgcag ctctatgggg
     3601 tgtgaacctt ctggtgggga ctgaaaatgg cctgatgctt ttggacagaa gtggccaagg
     3661 caaagtctac aacctaatca accggaggcg gtttcagcag atggatgtgc tagaaggact
     3721 aaatgttctt gtcacgatat caggaaagaa gaacaagctc cgtgtgtact atctctcatg
     3781 gttaagaaac agaatcctgc acaatgaccc agaagtggaa aagaagcagg gctggatcac
     3841 tgtcggtgac ttggaaggct gcatccatta caaagtcgtt aaatatgaaa gaatcaagtt
     3901 cctggtgatt gccttaaaga atgcagtaga gatatatgcg tgggccccta aaccttacca
     3961 taagttcatg gcatttaagt cttttgcaga tcttcagcat aagcctctgc tcgttgacct
     4021 cacagtagaa gaaggtcaaa ggttaaaggt catatttggc tcacacactg gtttccatgt
     4081 aattgatgtt gattctggaa actcctacga tatctatata ccatcccata ttcagggcaa
     4141 tatcactcct catgctatcg tcatcttgcc taaaacagat ggaatggaga tgcttgtctg
     4201 ctatgaggat gaaggggtgt acgtgaacac ctacggccgg atcactaagg atgtggtgct
     4261 ccaatgggga gaaatgccca catctgtggc ctacattcat tccaatcaga taatgggctg
     4321 gggcgagaaa gctattgaga tccggtcagt ggaaacagga catttggatg gagtgtttat
     4381 gcataaacga gctcaaaggt taaagtttct atgtgaaaga aatgataagg taaatccgtt
     4441 tcaactttgc tttagtgttt gcattttaag agaccaccag gtacctgtga aaccttcatt
     4501 ttcctttata ctgactcaag tcacatctgt gttcaatgat caatgacaat gaagtggcat
     4561 tacttggttt gattcatgtg aacattcaga atctatgact catgcatcca aaccagcata
     4621 aaacatctct tactttcttg taaactcttg gtgacttttg tggcctgagg gccttccagt
     4681 gacttgacaa ccattgtaga ctctcctatg cacttagagc agctagccca tcattggtca
     4741 cctcatagtg ggttagcctt atgccttcac ttttaggcct ttcacagaga cagtgttggg
     4801 acctagcttt catattatat tcacctttaa gtgtagaaaa tatgacatgt agaaatatga
     4861 gcttctaaac aatgtcactc attcctaaga aacatagtca caaactctac tcctgccatg
     4921 tcctgtctca tttcagccat gtgtctcctg acatgtcaca agggttgggg gggggggcta
     4981 cattccaacg gaagtgacca tgtctgtcca gcatgatctc tcgcctcaaa ggagtatact
     5041 taagtggtca tgctctgcct tgccctccct ggagagtaat ccggagtctt taatagctaa
     5101 tctacatttg tgagcccacc ctttgagact atgttcaccc gaccaaccat gtccacatag
     5161 agaataacgt gatgggttga actgtttaca tttctatatt caccccagtt ccccagaggc
     5221 cagactgctc tttatcccac cctggtaata tggatctgga ttctttgacc ctggctaact
     5281 atttctgacc tggtatggtc tagtgggcag tagctctgga agacgaggat agttaccagg
     5341 ggtcttatca gagtatgcca gaaaccagtc ttaacaattg agactccaac acttctgcag
     5401 tccctagatc ctaagaaatg agatgttctg tgtgttgacc actatactgt agttctcagt
     5461 gacccacccc agcaggcctg gtccaaccca tcctctcggg ctagtgcctc tagtttactc
     5521 cctgagctca caactagcaa ccttttcagc agatctccac tcttctccct gtttctattc
     5581 cctgacccct gagtagctgt agtttcccct gtagctttag ctaaatatca agcaactcca
     5641 caagcttctt aagaagccat ggacaccaag tagcacaaac tttcactagt gacacactca
     5701 ttcctcagac cacagacact ggcttactga agggctattg cacagcccca tatagtattt
     5761 tcctggggca gtggttcact gacaatcagc tcaagcaagc agtcatctaa attctgctca
     5821 cttcgcccag gcctttgata aaatgattga actggctcag acctaatgga ctgtgcttct
     5881 gcttattaat accattatct cccttggcct gggatctgct agcatcagca gagagcctaa
     5941 gtgttaaccc aaagaacact gtaaacactg gccattgaca ctgagccgat gcacagtgag
     6001 gataggacat gtgagagaaa atggctggca gttgaagaaa aagaaggggg aaaacagaaa
     6061 cccatgaagt tgaactaact tgtttttaat ttcaaacagg tattttttgc atccgtgcga
     6121 tctggaggaa gtagccaagt gtttttcatg accctcaaca gaaattccat gatgaactgg
     6181 taacagaaga gcacttggca cttatcttca tggcgttatt tctaatgtaa aagaacataa
     6241 ctcatgtgga cgtatgccag tctagaggca gaatcagaag gcctggttga acatactgct
     6301 ctctccgttt cctctccctc catctctccc aatatagtcc tttttggtgt tgcagcctgg
     6361 ttgagaagga gagaaagagg tggcgggaat ggctgggcaa gcgattccga ggatgctgca
     6421 ttgtctgtgg acagagatgg accttgtgcc cttcggagtt agggatagag acaaatattg
     6481 tgtgctctta tgattaagct gtgttcatgc tggcttttca gttctttttg gtttggaact
     6541 ttttaacttt ttcccccctt taccacctta ctttgtaaga atggggggaa atgcatactg
     6601 ggaacatagt ctttttaaaa ttctgtctgc ctgctagctt taagtatatg gtatgttgta
     6661 aaagttccaa ctcccagtag tgagaaacat cgcaataaat ggaccctatc tccctgcact
     6721 gaaggccata accacatagt ggggtaattt aagaattttc ttgccttcac taacccaaga
     6781 ggctattttt gttttgtctt gttttgtttt attttatctt ttttttttaa ttgctactgg
     6841 ctaatgaatt tttgaaagag aagcaaaata gctggttttc tcctctctgg ggaaatagat
     6901 tttaaatggc taaactatta gccttaacct aataaaatca actaccactc ttgtgagtct
     6961 gtcaggccat attttgatat ggccctttct ggaatggagg gtgttgaatg ggacagcgat
     7021 gccattgagt tgagtgggct tgtgactggg gagggactct gggatgtgac tgtccctcaa
     7081 ttattatgca acagatcagg gcaaaagatg ggatgacagg tgggtcaccc agaaggagct
     7141 tctgagaaat gagctaatat gtctatgtaa atacacacat gttctttctt caaggcacaa
     7201 agcctccttg ataagaggtc ccttcagttg ggctttgtta ggactgtgac tggttgagat
     7261 ctttcccaga gctgggggta cataacagcc atgctctgga aaccctccca agggtgccac
     7321 tttctcaaca gaaaaactgt gatggagaag aattactaat aaatgttcct gagctgcctg
     7381 tgttcttact gggtcgaggg actaactaga cttgcaaggc tgccgcacac agcaggcacc
     7441 aaaagctcag attttaggga acctaaaggc aaggctttga caaaattcta agactctaat
     7501 catgttatgt tcctccaaac tttccaacat actgttaaca acatctgtgc agagatgtgt
     7561 atgtatttag ttcaggttga cttgtgtcct tatagaaacc cttactcgaa tgatttgaac
     7621 ctttatgtga ctgactggga ttttcctcaa agctataagc atggccgcct acggtatcca
     7681 ggtgttgcga aatggtatct gtgctgtgct tcctgtttta acctacctcg ttttgtttgt
     7741 ttttgtttct ctgttcatca cagcagtgtt atctccagga gacatataga gagctcacct
     7801 ggcaatctca gctgtattga atattttcaa aacagtagtt gaccaaattg ttctttagaa
     7861 attggagggg gaaaaaaaat ctccaatgac aaaaacctaa tgcaggttgt ttttaaagaa
     7921 tacaattact gtaaatggat caaaaaagaa agacaaaaac tgggattctc ctgattttgc
     7981 ctaaagaaat gagcagctga tgtactatta atgagaacga aacttatatt aggaaaacgg
     8041 caccttttta atctggtagt tggccaaagg ggatgagaaa ggggactatt ctgagttctg
     8101 gactagggga aaatctgtaa tctccacagg tgattattgt ttgcagttat ctgaagcagg
     8161 taacacacag aaatatagtc agggtggtct tcaagtgatc accaggatgc gcccgtcatg
     8221 gtccctctag ctctcaaagg caatgaaatc cttccgttct catttttact gctggggtta
     8281 tgctgccaaa caacattgtc ctcatgaatt ccatgggaca aattcagcaa tagatctggg
     8341 ttgaatttag caactaccat aattggatgc tgatatggac aaaaataatg tagatttggg
     8401 tcttgtctcc aaatgcgatt gccaccagct ctttatattg ctgctgtgat gttttgaacc
     8461 tgaggcttcc ttaaattatg ttgcaaactg atctttgttt taatgttttg tttcgtttca
     8521 ttatttctaa gcgatacatc tgaaacacac agctttaaat gattttttat tgtgggactt
     8581 tgggtacagt taagaaataa aagggaatca ttgtgtttaa acataa
//
