LOCUS       XM_006508775            2010 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus tumor necrosis factor (ligand) superfamily,
            member 13b (Tnfsf13b), transcript variant X1, mRNA.
ACCESSION   XM_006508775
VERSION     XM_006508775.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Oct 19, 2023 this sequence was replaced by
            NM_001425009.1.
            
            On Aug 8, 2019 this sequence version replaced XM_006508775.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..2010
                     /gene="Tnfsf13b"
                     /gene_synonym="BAFF; BLyS; D8Ertd387e; TALL-1; TALL1;
                     THANK; TNFSF20; Tnlg7a; zTNF4"
                     /note="tumor necrosis factor (ligand) superfamily, member
                     13b; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 5 ESTs, 25 long SRA reads,
                     3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 5 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:24099"
                     /db_xref="MGI:MGI:1344376"
     CDS             615..1451
                     /gene="Tnfsf13b"
                     /gene_synonym="BAFF; BLyS; D8Ertd387e; TALL-1; TALL1;
                     THANK; TNFSF20; Tnlg7a; zTNF4"
                     /codon_start=1
                     /product="tumor necrosis factor ligand superfamily member
                     13B isoform X1"
                     /protein_id="XP_006508838.1"
                     /db_xref="GeneID:24099"
                     /db_xref="MGI:MGI:1344376"
                     /translation="MDESAKTLPPPCLCFCSEKGEDMKVGYDPITPQKEEGAWFGICR
                     DGRLLAATLLLALLSSSFTAMSLYQLAALQADLMNLRMELQSYRGSATPAAAGAPELT
                     AGVKLLTPAAPRPHNSSRGHRNRRAFQGPEETVIQDCLQLIADSDTPTIRKGTYTFVP
                     WLLSFKRGNALEEKENKIVVRQTGYFFIYSQVLYTDPIFAMGHVIQRKKVHVFGDELS
                     LVTLFRCIQNMPKTLPNNSCYSAGIARLEEGDEIQLAIPRENAQISRNGDDTFFGALK
                     LL"
ORIGIN      
        1 accaagacga gagcagagtt cagatggagt tcagtcactc agctttatgg cgctccattt
       61 catcttccac tggggagctg ttggcttcct tgtccggcag ccaaatgcag ttcagactca
      121 agcactgagc ttatctgact tgtacattaa ttatcgttta ttacaccact aggccttcag
      181 tgtccccttt ccccttcctt agaagccatg tggctccaag tagacagttc ttaagagcac
      241 actgaaggga aagcaccttc gataagcttg tctggagtga gtcagtctga accccaagct
      301 gccccccccc ccagccgccg tgtcagaggc ctcgcatctc ccacaaacag gactgtattg
      361 agatagaatg aaacatctta caaaaactga aagtgaaatg cggaaggcag attgagcaat
      421 ccatggaagg ccagagccag agaacctact tcagggtagc aaaagatgca gaagaaagtc
      481 aggagagcgc tcctggggga acccagccct gccatgctct gagggcagtc tcccaggaca
      541 cagatgacag gaaatgaccc acccctgtgg tcacttactc caaaggccta gaccttcaaa
      601 gtgctcctcg tggaatggat gagtctgcaa agaccctgcc accaccgtgc ctctgttttt
      661 gctccgagaa aggagaagat atgaaagtgg gatatgatcc catcactccg cagaaggagg
      721 agggtgcctg gtttgggatc tgcagggatg gaaggctgct ggctgctacc ctcctgctgg
      781 ccctgttgtc cagcagtttc acagcgatgt ccttgtacca gttggctgcc ttgcaagcag
      841 acctgatgaa cctgcgcatg gagctgcaga gctaccgagg ttcagcaaca ccagccgccg
      901 cgggtgctcc agagttgacc gctggagtca aactcctgac accggcagct cctcgacccc
      961 acaactccag ccgcggccac aggaacagac gcgctttcca gggaccagag gaaacagtca
     1021 ttcaagactg tctgcagctg attgcagaca gcgacacgcc gactatacga aaaggaactt
     1081 acacatttgt tccatggctt ctcagcttta aaagaggaaa tgccttggag gagaaagaga
     1141 acaaaatagt ggtgaggcaa acaggctatt tcttcatcta cagccaggtt ctatacacgg
     1201 accccatctt tgctatgggt catgtcatcc agaggaagaa agtacacgtc tttggggacg
     1261 agctgagcct ggtgaccctg ttccgatgta ttcagaatat gcccaaaaca ctgcccaaca
     1321 attcctgcta ctcggctggc atcgcgaggc tggaagaagg agatgagatt cagcttgcaa
     1381 ttcctcggga gaatgcacag atttcacgca acggagacga caccttcttt ggtgccctaa
     1441 aactgctgta actcacttgc tggagtgcgt gatccccttc cctcgtcttc tctgtacctc
     1501 cgagggagaa acagacgact ggaaaaacta aaagatgggg aaagccgtca gcgaaagttt
     1561 tctcgtgacc cgttgaatct gatccaaacc aggaaatata acagacagcc acaaccgaag
     1621 tgtgccatgt gagttatgag aaacggagcc cgcgctcaga aagaccggat gaggaagacc
     1681 gttttctcca gtcctttgcc aacacgcacc gcaaccttgc tttttgcctt gggtgacaca
     1741 tgttcagaat gcagggagat ttccttgttt tgcgatttgc catgagaaga gggcccacaa
     1801 ctgcaggtca ctgaagcatt cacgctaagt ctcaggattt actctccctt ctcatgctaa
     1861 gtacacacac gctcttttcc aggtaatact atgggatact atggaaaggt tgtttgtttt
     1921 taaatctaga agtcttgaac tggcaataga caaaaatcct tataaattca agtgtaaaat
     1981 aaacttaatt aaaaaggttt aagtgtgaaa
//
