LOCUS       NM_001419372            1943 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus transmembrane protein 51 (Tmem51), transcript variant
            6, mRNA.
ACCESSION   NM_001419372 XM_006538714
VERSION     NM_001419372.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Pan,J., Mor,G., Ju,W., Zhong,J., Luo,X., Aldo,P.B., Zhong,M.,
            Yu,Y., Jenkins,E.C., Brown,W.T. and Zhong,N.
  TITLE     Viral Infection-Induced Differential Expression of LncRNAs
            Associated with Collagen in Mouse Placentas and Amniotic Sacs
  JOURNAL   Am J Reprod Immunol 74 (3), 237-257 (2015)
   PUBMED   26073538
REFERENCE   3  (bases 1 to 1943)
  AUTHORS   Harrow,J.L., Steward,C.A., Frankish,A., Gilbert,J.G.,
            Gonzalez,J.M., Loveland,J.E., Mudge,J., Sheppard,D., Thomas,M.,
            Trevanion,S. and Wilming,L.G.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
REFERENCE   4  (bases 1 to 1943)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   5  (bases 1 to 1943)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL663037.13.
            
            On Mar 31, 2023 this sequence version replaced XM_006538714.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.4829763.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-311               AL663037.13        62306-62616         c
            312-840             AL663037.13        51443-51971         c
            841-1943            AL663037.13        45030-46132         c
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 75.17 cM"
     gene            1..1943
                     /gene="Tmem51"
                     /note="transmembrane protein 51"
                     /db_xref="GeneID:214359"
                     /db_xref="MGI:MGI:2384874"
     exon            1..311
                     /gene="Tmem51"
                     /inference="alignment:Splign:2.1.0"
     exon            312..840
                     /gene="Tmem51"
                     /inference="alignment:Splign:2.1.0"
     CDS             500..1249
                     /gene="Tmem51"
                     /codon_start=1
                     /product="transmembrane protein 51"
                     /protein_id="NP_001406301.1"
                     /db_xref="GeneID:214359"
                     /db_xref="MGI:MGI:2384874"
                     /translation="MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSPADKPT
                     SQGNKTEGGGGILKSKTFSVAYVLVGAGMMLLLLAICLSIRDKRRMRQSEELARIQQQ
                     AGTVPHSQEEDSQEEEEDVSSRYYVPSYEEVMNTGYPETRGQEQNPRLSISLPSYESL
                     TGLDEATPTSTRAETETSPGHAPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRITLPD
                     KNVPPPSIEPLTPPPLYDEVQAKAPDARPPD"
     exon            841..1943
                     /gene="Tmem51"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1921..1926
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem51"
                     /note="hexamer: AATAAA"
     polyA_site      1943
                     /gene="Tmem51"
                     /note="major polyA site"
ORIGIN      
        1 gtcacatcca tagtacaacc aggaggaagg aggagagaga tcctttccat tgaagaacgc
       61 ttcctgagtg ggcgccccca gccctctgct gcttggaact cattggccag aactcagtca
      121 gatgaagcag ctcgctgggg aggctgagta atgctgtctg ggttccgaga accctgggga
      181 gttgagtgtc agttttctta ccatggaaga agggaagagt agacttcagg aatggcctca
      241 ctcactctcc acaggagaat cccagccagc gaacaacatc acatctcttc tccagccccc
      301 ctccaactca gatctctcgt ctgctccatc cacccgggat acctggcatt tgaagagagc
      361 catcgcttga gagtctacgg atgactttcc gctgtgacac aggagagtct ctttgctgca
      421 tggacacagt gtctattggc actactgctt tctgatttat tttctctctt tgagccgggt
      481 cttgccccgc tccgctgtca tgatggccca atccaaagcc aacggctcac actacgcact
      541 gacggccatc ggcctgggga tgctggtcct cggggtcatc atggccatgt ggaacctggt
      601 tcctggtttc agccctgcgg ataagccaac gtctcagggc aacaagacag agggaggtgg
      661 tggcatcctc aagagcaaga cgttttcagt ggcgtacgtg ctggtcgggg ctggcatgat
      721 gctgctgctg ctagccatct gcctgagcat ccgggacaaa aggaggatgc ggcagagtga
      781 ggagctggct cgaattcagc agcaggcagg aaccgtgccc cactcccaag aagaagacag
      841 ccaggaggaa gaggaggatg tctcctcacg gtactacgta ccgagctacg aggaagtgat
      901 gaacacgggc tacccggaaa ccagggggca ggagcagaac ccaagactga gcatttctct
      961 cccctcctat gagtcgctaa cggggctgga cgaggcaacc cccaccagca ccagggcgga
     1021 gacagagacc agcccagggc atgctccgga caggcaaaac tccaagctgg ccaaacgcct
     1081 gaagccactc aaagttcgaa ggattaaatc cgaaaagctt cacctcaaag acttcaggat
     1141 caccctaccg gacaagaacg ttcctcctcc ctctatcgag cctttgactc ctccgcccct
     1201 gtacgatgag gtccaggcaa aggcgcccga tgcccggcca cccgactgaa ggactctctg
     1261 actacactcc ctcctgtctc accctccaca ccaacagact tcgccaaagc cacttcagcc
     1321 ccagtcgagg ggtcaaggca cacttagcca ctgtgatggg gattgtgggt agagggagag
     1381 aacggttcac agagccccgc agagtagggg catcagaagg atgctgggag tttatgatgc
     1441 tctgaaccat agcaaggggt gtggccttgg catccccggc atctttctct cccacttggg
     1501 atcattgccc acacacccct ctcctaagct gggacacgat ccctagtgac tcgtttagac
     1561 cgaggtcgtc tcctttcgct tcgaccacag ttgctgcgtt tcaaaaagaa accgtgtttt
     1621 gtgcttgctt tcttcactgg agccttgaac cagtggagaa cgtggttctg ccttggccaa
     1681 aaggacctgg aattgtcttg tgaataaaat gatggccgtg tgggggtgag ctgtggggga
     1741 ggtccctagg ggccccaagt gctgctggtt ctttgaaggt ctaaggcctg atgaccttca
     1801 gcgtgcgaca cagaaggtga ttgtccggtt cggtacactg gtttcctgtg ggtaacgaaa
     1861 ggcaagagag gaagtcgctg ctccatgcct tctcaaacgc catgcagttg ggcattttat
     1921 aataaagtgt tttatatgta gca
//
