LOCUS       NP_620090                181 aa            linear   ROD 30-APR-2024
DEFINITION  transmembrane protein 47 [Mus musculus].
ACCESSION   NP_620090 NP_786965
VERSION     NP_620090.1
DBSOURCE    REFSEQ: accession NM_138751.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 181)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (residues 1 to 181)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 181)
  AUTHORS   Gurdziel,K., Vogt,K.R., Walton,K.D., Schneider,G.K. and
            Gumucio,D.L.
  TITLE     Transcriptome of the inner circular smooth muscle of the developing
            mouse intestine: Evidence for regulation of visceral smooth muscle
            genes by the hedgehog target gene, cJun
  JOURNAL   Dev Dyn 245 (5), 614-626 (2016)
   PUBMED   26930384
REFERENCE   4  (residues 1 to 181)
  AUTHORS   Miller,J.A., Nathanson,J., Franjic,D., Shim,S., Dalley,R.A.,
            Shapouri,S., Smith,K.A., Sunkin,S.M., Bernard,A., Bennett,J.L.,
            Lee,C.K., Hawrylycz,M.J., Jones,A.R., Amaral,D.G., Sestan,N.,
            Gage,F.H. and Lein,E.S.
  TITLE     Conserved molecular signatures of neurogenesis in the hippocampal
            subgranular zone of rodents and primates
  JOURNAL   Development 140 (22), 4633-4644 (2013)
   PUBMED   24154525
REFERENCE   5  (residues 1 to 181)
  AUTHORS   Azhibekov,T.A., Wu,Z., Padiyar,A., Bruggeman,L.A. and Simske,J.S.
  TITLE     TM4SF10 and ADAP interaction in podocytes: role in Fyn activity and
            nephrin phosphorylation
  JOURNAL   Am J Physiol Cell Physiol 301 (6), C1351-C1359 (2011)
   PUBMED   21881001
  REMARK    GeneRIF: TM4SF10, possibly through ADAP, may regulate Fyn activity
REFERENCE   6  (residues 1 to 181)
  AUTHORS   Quina,L.A., Wang,S., Ng,L. and Turner,E.E.
  TITLE     Brn3a and Nurr1 mediate a gene regulatory pathway for habenula
            development
  JOURNAL   J Neurosci 29 (45), 14309-14322 (2009)
   PUBMED   19906978
REFERENCE   7  (residues 1 to 181)
  AUTHORS   Bruggeman,L.A., Martinka,S. and Simske,J.S.
  TITLE     Expression of TM4SF10, a Claudin/EMP/PMP22 family cell junction
            protein, during mouse kidney development and podocyte
            differentiation
  JOURNAL   Dev Dyn 236 (2), 596-605 (2007)
   PUBMED   17195181
  REMARK    GeneRIF: TM4SF10 functions during differentiation of podocytes and
            may participate in the maturation of cell junctions from simple
            adherens junctions to elaborate slit diaphragms.
REFERENCE   8  (residues 1 to 181)
  AUTHORS   Christophe-Hobertus,C., Szpirer,C., Guyon,R. and Christophe,D.
  TITLE     Identification of the gene encoding Brain Cell Membrane Protein 1
            (BCMP1), a putative four-transmembrane protein distantly related to
            the Peripheral Myelin Protein 22 / Epithelial Membrane Proteins and
            the Claudins
  JOURNAL   BMC Genomics 2, 3 (2001)
   PUBMED   11472633
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL671873.15.
            
            On Dec 25, 2009 this sequence version replaced NP_786965.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK030761.1, AK162304.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 38.38 cM"
     Protein         1..181
                     /product="transmembrane protein 47"
                     /note="transmembrane 4 superfamily member 10"
                     /calculated_mol_wt=19864
     Site            2
                     /site_type="acetylation"
                     /note="N-acetylalanine.
                     /evidence=ECO:0000250|UniProtKB:Q9BQJ4; propagated from
                     UniProtKB/Swiss-Prot (Q9JJG6.1)"
     Region          21..170
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     Site            21..41
                     /site_type="transmembrane region"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9JJG6.1)"
     Site            83..103
                     /site_type="transmembrane region"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9JJG6.1)"
     Site            115..135
                     /site_type="transmembrane region"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9JJG6.1)"
     Site            152..172
                     /site_type="transmembrane region"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9JJG6.1)"
     CDS             1..181
                     /gene="Tmem47"
                     /gene_synonym="3010015F07Rik; BCMP1; Tm4sf10"
                     /coded_by="NM_138751.2:292..837"
                     /db_xref="CCDS:CCDS30254.1"
                     /db_xref="GeneID:192216"
                     /db_xref="MGI:MGI:2177570"
ORIGIN      
        1 masagsgmee vrvsvltplk lvglvcifla lcldlgavls pawvtadhqy ylslwescrk
       61 panldiwhce stlgsdwqia tlalllggaa iiliaflvgl isicvgsrrr fyrpvavmlf
      121 aavvlqvcsl vlypikfiet vslkiyhefn wgyglawgat ifsfggaily clnpknyedy
      181 y
//
